|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:574401..579160+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00354.4 ID=Blg00354.4|Name=Blg00354.4|organism=Branchiostoma lanceolatum|type=mRNA|length=4760bp|location=Sequence derived from alignment at Sc0000086:574401..579160+ (Branchiostoma lanceolatum) CGTCGCCCTAACATAAACACGGGAGGCTGACGTTTCTGTAAAATCGGATC
ACTTCGCTATGCATGAAAACTAAAAGCACCACTTGGTTTGTTGTCTGTTT
GTCCATTTGCATGCATGTCGGGTACAATCGCCTGTATGCATGACTGGTAC
AGGCATTAGTAGTCTACACCAGACTACTAGCTGTAGAGTTGCTGAAAAAT
ACACTGAGTAGCAAGTGGCCAAGAAGGGTGAGTAATTTTTCGGACTGAAG
AGTTGCTAAGGTGGACCTCTGTGTCCTGCTAACTCTTCTGACAAATAAGT
CACCATATTTTGCCAATGTCTCCTATTTTGTTGTAAAGCTAAGGAGTCTC
GAGGAGACTATGTATTGATTTGTGCTAACTGAGCTGGACTGTTTCTATCG
TGTAACACTGTAGCACTGAACAAGGCACGATCCTCTGGTTGCGCTCAAGA
ATCATTTTCGCTGAGTATAGTCGACAGGTTATGCGTTGGCATGGCTTGCA
ACGGTAGAAAAGTTAATGTACGCCACGGCTCTTTCAAAGACTATCATGAC
AGTCAATATAGTAACCTATACACACACAATAAGCTAGTGACACCGTTTTC
TTTTTTCAACGAGTTTTAAGCGTAACTTAAATATAAGTCTACAGAGTACA
AATGTACAATACATATACGTGCACTGCATTACACTGCAGACTGGTCACGG
TAGCCTACGTAGCAGACTCCTCGGTGGGCATTTCAACATGGCCGTCTGCC
GCTGATGGTGCACTGTTTTCTTATTGCTAGCTAGTTCCTTATGCTCCTGT
TTTCCGCTTTTCCGCTTGGAATAATTAGAAGGCAGTCAGATTACAATCAG
ATAAACAAAACAAAAACTGCAATGCTTTTTGAGAGGAAGCTTGACCAAAG
TAAGTAAAATGCCAGTCCAGGAGCCTGCTATGGAGGCTACACCACGTCAG
GTGTTTCTGATCGCGTGATTATGGTATCCCGGGCCCGCCTATTGAAAAGA
CTTATGTCTTGTTGACTTTATCGACTATGTACATTGGTCGACACGCTATG
CAAATACGGATGTATGCAGACCGTAGTAAGAATGCAAAAGAGGACTTTAG
AAAACCACGCTATTAAAACGTCAAAAACGGCTGGTTGAATTCTAGAATTG
ATTACAAGAGGGATAAAAGATGTCACTTGCAGGTGACGTCTCTAGGGTCA
GAAGTTTAAAGCTGTACGTGGTGAAATACGATACGTTTCTTTTATTGGGT
CCCGGGCAAAACATTTACACAGGGAAGGTCGTTTGTCGTTGTACATCGCA
TGAAAGCAGGTTCATGTCGGAATTCGAAGGTAGGTATGGTTTAACTTTCC
GGGTTACCAAAATATTGAAGGGGTGTCTGCAAAACTGTAGAATTACGTAT
GGTTGTCACTTCACACGTATTTACGTGCTGTGCGTGTAAAGGGTAGGTGC
GTGTGTGGGGAGGGGGGCGCGGACGATCACGTTCATAGCCGGACCTTGGA
CCGCACACCTGCGTGATCTTCACGTGAAGGCGAGTTCCCGTTAGAGGGTC
GGTCGATATTGCCACACCGACAGACGTCTGTTCAGTCTGACAGTTTAGTG
GGACTAACGTTATATTCTAAGTGCTGGTACTGAATATTCCCTTCAGTTAA
ACGGTTCGCTGGTTACGTTTTGTTTGTAACGGACGGTAACGGAAAAGGTA
GGTGATTTGCAAGTTGTCGTTTTTCCCAACACCTTTAGCGATTGGTGATT
TACTAGAAGGTAATCTTATGTGTGTTAAGCATATCACTTGAAACGAGAGG
TGACCAAAAATTGTTACCTAGTACCAAGGAGGTTATAGTATGACTATAAT
CACTATACCCTCCTTGCTAGTACATATGTCAGGTGTGTTACTTAGTATTG
TAGATTGCATGTATAGCTTTATCTTACCACAGTGGTCTGGCCTATCATTG
GAATGTCGTACTTAAAGCGACAAATATACCCTTTAGATACAGCTGTTCAA
TTCGTTATTTCTGTTTAAAAGTGTTTTTTTTTTCAAGTCACACCATGCGT
TAAGTAAAAAAATACTAGATGGGTGATGATTTGAACCGTCAAAAAACTAG
GTTTCTATCCGTCAAGCGACGCCGCAAATGAACTACAACTACCTGTAACG
TTACATGTACTAAATCGACTCAAGCATACCATGCGTCACAATGTCACTAG
TACTGGTACAACGGCTGAGTGCTGAAAGATTAGTCTCTGTATGAAGGCAG
AACCCTCGTTGTTGATGGCCCTCCCTTGATCTCCAAGCAGATGTTGGGAG
GGAAGATCGTAGTAACGTTTTCTGACCGCCTACTGTAAAATAAAACGGAG
CAGCTATCAAACGTTACAAGTCGTCTCTCTCAACATCTGCTTGGAGATAT
AACCCTCAAAGGCCGTTCAGTGAGAGGGTCATGGTTAATGATTATAGTAG
TTAGGCCCTTTGTAGCCGCTAGTACTAGTAGCCGCTAGCTGCAATCTTTT
CGATTGCTATCGGGTCATCGGTTACTTCGGGAGATGGTACTAAGGTAAGG
CCATTTCAGGACTCTACGTGAAACTTGTGAGTACCGCCAGTGGCGTGAAG
TCGGAAGCGGCTGAAAAATGACACCGTCTGGTAACAGGTTGTCGTCTGGT
AACAGGTGACAAACACAGAGGGGTTATCTTTCTTTCAACAAATGATGATC
CGTGCAATACTAGTATTTGCAGATTATTTCGCACGATTTAACACAGAGGT
TAATCGATAATTGTTGTTTATATTTCATCTGTAGGTTTTCTCCAGGAACC
ATAATCATGTATTTCTGGCAACAGTGGAAGATTCTGTCCCAGTTGCAGAG
GCTGCCACGTCAGCGGCTGGTGCAGCTGACGGAAGTGCTGCAGGGCAAGG
CGATGGGCGTGACGGAGCCAGCAGCCGCCACCGCCGCCGCGCAACATCTG
CGACGCCGCCCCGACGCCAGCATGCAGGCCCAGACGGAGGGACTAGGCCA
AGAGGACACCATGCTAGGGCTGAAACAGGCCCAACCGACGGTATCCAGTC
ATCACCGGCGGGACTTCGACTCCAGCATGCAGGTACACGCCGACGGACTG
GGCCATCACGACACGATGTTCGCGGCTCACGCCAGGGCCATGTCCACCGT
GTCTGAGCAGCAAGTACCGAGCGTGAGGAAAACCAACGGCAACGGGAACG
AGAGGAAGGGTCGCGCCCAGGTGATCGAGCAGCTACTGTCTCCAGATGCC
CCGCAGGACGTCTTGAAGCGGGCCACCGACAGACTCAACCAGCAGGAGAA
GATGCACCTGAGACAACTTGTCATGAAGGCGATGGCTTGATGGAATGATG
CGTGTAACGTGGAGTCGTTGAAAACTGAGAACAGAGANGATGCGATATGC
GTGTAACGTGAAGTCGTTGAAAAAGAACAGAGAGACTTTAGAAGTAACAT
TTGTAGAGACTAATCTTAAAGCATTTTCATTCAACGATTACGTGTATCTT
GAAGAGTGCCTCTTGTACAATTATTGTATTCATTACTTCTGGAACTATCA
CAAACTTATCGTGTGTGAAAAAGCAATAGCAGTTTTATGTTAGGTGAAAA
TGTTTCTATCAGCTCATCAAAGAGTTACGTCACTGCTACAGGTGTGCACA
TCAAAGAGCCGCACAGGGCAACATGTGTCCTGTGCGTCCTGTGCACATCA
GCCAGCCTGACGCCAGGTGGCGCTACTGCGCGCGACAGAATCCACACCTG
CGGCATCTTGTCACACATGTTGCCCTGTGCGGCTCTTTGATGTGCACACC
TGTAGCGGTGACGTAAGTCTTTGAAGAGCTGATAGAAACATTTTCACCTA
ACATAAAACTGCTATTGTTCAGCTTTTGGTATGTTCCCTATAAGTAGTCA
AAACCTATTGCCTGAAAAAGTTACCAAGCAGCAAGGTCTACAACAAAATA
AACGTGTAATATATAACATTTTTCTCCTTCTTACCAGTTAATTGTAAATA
GTGTGGCAGTGTTGTTGCTCACAAAAAGTTCCATCTGAAAGACTTTCATA
ATTTGGTCTTACCCTGGTTGAATTGGAACCAACATTGTAAGCATATATGT
TGATTTTACATATACTTTTTTGTCAGCAAAAATTGTGTGGAACTCCTTGC
AACTTTAGAGCTATTTTTGTTGATATAGGTTTACCCTGAATTGTTAAGTG
AATACAAGTATTTTCCATTGTTTCAATATACATGTATATGTCATCCCTGA
AATTTACTTCTCTTATTCTCAGTGCTATGAATTGTGACTTTCAGAGTCTT
ACAGGCGGTCATAGATCTTTGTGGTTAGAGTTACAAAGATGTAGTATGAA
CTGCAGAAAACATGTCAAAAGTAGGTAATTCTTGTCATAGAAGAAGCTTT
TTTAAAAAATGTATTAATGATTTCTCTCTGTCTGTATGAATGTACATAAT
AAATACAAGCATATGTTTTGTAAGTGTAATTGTATTACTTGTGGAGAGAG
AAAAGGCAACAGACTTTGGTTATTCTGCTAGAATATTAGAGCACGTTTTT
TTTACCAAATAGCCCAGTGGGAAAAGTGCATGCTATACATTTGGGAGGTT
GCAGGCTCAACCCCTAGCTGTGTCATTCATACCAAAGATGTTTATAGTGA
TACATACTGCTTTAACTGCTTAGCACTCAGCAAGAGTAGGGGAGTTAAAC
ACACACACCCCTACCAGTGGACTAGTCTCCTACTGTAGTGCTTGCATAAC
TGTGTGACCC Coding sequence (CDS) from alignment at Sc0000086:574401..579160+ >Blg00354.4 ID=Blg00354.4|Name=Blg00354.4|organism=Branchiostoma lanceolatum|type=CDS|length=534bp|location=Sequence derived from alignment at Sc0000086:574401..579160+ (Branchiostoma lanceolatum) ATGTATTTCTGGCAACAGTGGAAGATTCTGTCCCAGTTGCAGAGGCTGCC ACGTCAGCGGCTGGTGCAGCTGACGGAAGTGCTGCAGGGCAAGGCGATGG GCGTGACGGAGCCAGCAGCCGCCACCGCCGCCGCGCAACATCTGCGACGC CGCCCCGACGCCAGCATGCAGGCCCAGACGGAGGGACTAGGCCAAGAGGA CACCATGCTAGGGCTGAAACAGGCCCAACCGACGGTATCCAGTCATCACC GGCGGGACTTCGACTCCAGCATGCAGGTACACGCCGACGGACTGGGCCAT CACGACACGATGTTCGCGGCTCACGCCAGGGCCATGTCCACCGTGTCTGA GCAGCAAGTACCGAGCGTGAGGAAAACCAACGGCAACGGGAACGAGAGGA AGGGTCGCGCCCAGGTGATCGAGCAGCTACTGTCTCCAGATGCCCCGCAG GACGTCTTGAAGCGGGCCACCGACAGACTCAACCAGCAGGAGAAGATGCA CCTGAGACAACTTGTCATGAAGGCGATGGCTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00354.4-exon-Sc0000086-1570713199:574401..574627 | Blg00354.4-exon-Sc0000086-1570713199:574401..574627 | Branchiostoma lanceolatum | exon |
Blg00354.4-exon-Sc0000086-1570713199:577185..577744 | Blg00354.4-exon-Sc0000086-1570713199:577185..577744 | Branchiostoma lanceolatum | exon |
Blg00354.4-exon-Sc0000086-1570713199:577808..579160 | Blg00354.4-exon-Sc0000086-1570713199:577808..579160 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:574401..579160 + |
Properties
Property Name | Value |
GeneID | Blg00354 |
|