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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:573262..579160+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00354.1 ID=Blg00354.1|Name=Blg00354.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5899bp|location=Sequence derived from alignment at Sc0000086:573262..579160+ (Branchiostoma lanceolatum) AGGAGGGGTTCTTGATACTTGTTTTGACGTAACAAACGCCGACATGCTGT
TTCTCTGTGATATTGTAGCCCGGTTTGGACTAAAATAGCTAGGTTTGGCT
ATTCTTGTTTAGCGTCGGCTTGCACATCTCATAACGTCGGTCATAGAAGA
AGAAGAAGAACTTTATTGCGCGACAATTGTAGCTGGTACAATGACAACTT
ACGTGCATGATAATTAAGCTATTGCTAATTGTTGACAGATATAGAGAACT
AATCTAATCTATGACTAACAGTAAAATAGTCTATAAAATAATGTACATGC
TAACGCTCTAGAATACAATATGTAATAATAATGTTGATAACAGTATGCTG
TGTCAGGAATGTATGATATTGTCTCGTTTTTGCACAGAGTTATATACAAT
GATATATATGATGACCTGATATCACGTGAATATATGTGTTTTCAAATGTG
CCACATGCAGCGAAAGATGCATCTGCATAGTATTGAAGAAAAGGGCGATC
GTGTGTGTAATACGGTTTATGATAGGCTTCAGGTGCCTTTAATTCTGTAT
GCGTAGATTGGCAATAGCTGCACACACGTGAAATCTTGTTGTTCCGTTGG
GTAGAGCCGGAGAGTGGGCGATGCCACCATTGGGGGTTTGGCAGTTTTTG
TAAGCCGTTATTGGCCGTTATAATCTTATGTGCATTATAAAGCGTAATTT
TTAGACGGCTGGATTCATCGTACCTAATAACGCTCTAATCCGAAATAGGG
ACAAATCGAATTTTTAACATAATGCGCTATGAGCGCCGAGAATTTTGCAT
ATTTCGAACTGCACTACCGACTACCCCCATGCAGACCCCCTACAATTGAC
TCTACCCGAGAGGTCGACTGTCAAGCCGGAGGAGAGCCGAGCCGGATGTT
TAAGGATCTCTAACCCGGTAGTGCAGATAACTGAGACGGGGGCTCAGAAA
GGACTACATCGTTCAACAGTTCTCAACAGCGGTAGGTGGGAGTTTTATAG
TTCGTGACTTTCGTAGTAGATCATAGGTAGGTTGTAGCAAGGAGATTAAT
ATCAACCAACCTCCTTGGTTGCTGAAAATTTGGAATTACCAGCACTAACG
TTATAGTGTCCATCCATGTAAACAATAAAAGATGTTAAACGTCGCCCTAA
CATAAACACGGGAGGCTGACGTTTCTGTAAAATCGGATCACTTCGCTATG
CATGAAAACTAAAAGCACCACTTGGTTTGTTGTCTGTTTGTCCATTTGCA
TGCATGTCGGGTACAATCGCCTGTATGCATGACTGGTACAGGCATTAGTA
GTCTACACCAGACTACTAGCTGTAGAGTTGCTGAAAAATACACTGAGTAG
CAAGTGGCCAAGAAGGGTGAGTAATTTTTCGGACTGAAGAGTTGCTAAGG
TGGACCTCTGTGTCCTGCTAACTCTTCTGACAAATAAGTCACCATATTTT
GCCAATGTCTCCTATTTTGTTGTAAAGCTAAGGAGTCTCGAGGAGACTAT
GTATTGATTTGTGCTAACTGAGCTGGACTGTTTCTATCGTGTAACACTGT
AGCACTGAACAAGGCACGATCCTCTGGTTGCGCTCAAGAATCATTTTCGC
TGAGTATAGTCGACAGGTTATGCGTTGGCATGGCTTGCAACGGTAGAAAA
GTTAATGTACGCCACGGCTCTTTCAAAGACTATCATGACAGTCAATATAG
TAACCTATACACACACAATAAGCTAGTGACACCGTTTTCTTTTTTCAACG
AGTTTTAAGCGTAACTTAAATATAAGTCTACAGAGTACAAATGTACAATA
CATATACGTGCACTGCATTACACTGCAGACTGGTCACGGTAGCCTACGTA
GCAGACTCCTCGGTGGGCATTTCAACATGGCCGTCTGCCGCTGATGGTGC
ACTGTTTTCTTATTGCTAGCTAGTTCCTTATGCTCCTGTTTTCCGCTTTT
CCGCTTGGAATAATTAGAAGGCAGTCAGATTACAATCAGATAAACAAAAC
AAAAACTGCAATGCTTTTTGAGAGGAAGCTTGACCAAAGTAAGTAAAATG
CCAGTCCAGGAGCCTGCTATGGAGGCTACACCACGTCAGGTGTTTCTGAT
CGCGTGATTATGGTATCCCGGGCCCGCCTATTGAAAAGACTTATGTCTTG
TTGACTTTATCGACTATGTACATTGGTCGACACGCTATGCAAATACGGAT
GTATGCAGACCGTAGTAAGAATGCAAAAGAGGACTTTAGAAAACCACGCT
ATTAAAACGTCAAAAACGGCTGGTTGAATTCTAGAATTGATTACAAGAGG
GATAAAAGATGTCACTTGCAGGTGACGTCTCTAGGGTCAGAAGTTTAAAG
CTGTACGTGGTGAAATACGATACGTTTCTTTTATTGGGTCCCGGGCAAAA
CATTTACACAGGGAAGGTCGTTTGTCGTTGTACATCGCATGAAAGCAGGT
TCATGTCGGAATTCGAAGGTAGGTATGGTTTAACTTTCCGGGTTACCAAA
ATATTGAAGGGGTGTCTGCAAAACTGTAGAATTACGTATGGTTGTCACTT
CACACGTATTTACGTGCTGTGCGTGTAAAGGGTAGGTGCGTGTGTGGGGA
GGGGGGCGCGGACGATCACGTTCATAGCCGGACCTTGGACCGCACACCTG
CGTGATCTTCACGTGAAGGCGAGTTCCCGTTAGAGGGTCGGTCGATATTG
CCACACCGACAGACGTCTGTTCAGTCTGACAGTTTAGTGGGACTAACGTT
ATATTCTAAGTGCTGGTACTGAATATTCCCTTCAGTTAAACGGTTCGCTG
GTTACGTTTTGTTTGTAACGGACGGTAACGGAAAAGGTAGGTGATTTGCA
AGTTGTCGTTTTTCCCAACACCTTTAGCGATTGGTGATTTACTAGAAGGT
AATCTTATGTGTGTTAAGCATATCACTTGAAACGAGAGGTGACCAAAAAT
TGTTACCTAGTACCAAGGAGGTTATAGTATGACTATAATCACTATACCCT
CCTTGCTAGTACATATGTCAGGTGTGTTACTTAGTATTGTAGATTGCATG
TATAGCTTTATCTTACCACAGTGGTCTGGCCTATCATTGGAATGTCGTAC
TTAAAGCGACAAATATACCCTTTAGATACAGCTGTTCAATTCGTTATTTC
TGTTTAAAAGTGTTTTTTTTTTCAAGTCACACCATGCGTTAAGTAAAAAA
ATACTAGATGGGTGATGATTTGAACCGTCAAAAAACTAGGTTTCTATCCG
TCAAGCGACGCCGCAAATGAACTACAACTACCTGTAACGTTACATGTACT
AAATCGACTCAAGCATACCATGCGTCACAATGTCACTAGTACTGGTACAA
CGGCTGAGTGCTGAAAGATTAGTCTCTGTATGAAGGCAGAACCCTCGTTG
TTGATGGCCCTCCCTTGATCTCCAAGCAGATGTTGGGAGGGAAGATCGTA
GTAACGTTTTCTGACCGCCTACTGTAAAATAAAACGGAGCAGCTATCAAA
CGTTACAAGTCGTCTCTCTCAACATCTGCTTGGAGATATAACCCTCAAAG
GCCGTTCAGTGAGAGGGTCATGGTTAATGATTATAGTAGTTAGGCCCTTT
GTAGCCGCTAGTACTAGTAGCCGCTAGCTGCAATCTTTTCGATTGCTATC
GGGTCATCGGTTACTTCGGGAGATGGTACTAAGGTAAGGCCATTTCAGGA
CTCTACGTGAAACTTGTGAGTACCGCCAGTGGCGTGAAGTCGGAAGCGGC
TGAAAAATGACACCGTCTGGTAACAGGTTGTCGTCTGGTAACAGGTGACA
AACACAGAGGGGTTATCTTTCTTTCAACAAATGATGATCCGTGCAATACT
AGTATTTGCAGATTATTTCGCACGATTTAACACAGAGGTTAATCGATAAT
TGTTGTTTATATTTCATCTGTAGGTTTTCTCCAGGAACCATAATCATGTA
TTTCTGGCAACAGTGGAAGATTCTGTCCCAGTTGCAGAGGCTGCCACGTC
AGCGGCTGGTGCAGCTGACGGAAGTGCTGCAGGGCAAGGCGATGGGCGTG
ACGGAGCCAGCAGCCGCCACCGCCGCCGCGCAACATCTGCGACGCCGCCC
CGACGCCAGCATGCAGGCCCAGACGGAGGGACTAGGCCAAGAGGACACCA
TGCTAGGGCTGAAACAGGCCCAACCGACGGTATCCAGTCATCACCGGCGG
GACTTCGACTCCAGCATGCAGGTACACGCCGACGGACTGGGCCATCACGA
CACGATGTTCGCGGCTCACGCCAGGGCCATGTCCACCGTGTCTGAGCAGC
AAGTACCGAGCGTGAGGAAAACCAACGGCAACGGGAACGAGAGGAAGGGT
CGCGCCCAGGTGATCGAGCAGCTACTGTCTCCAGATGCCCCGCAGGACGT
CTTGAAGCGGGCCACCGACAGACTCAACCAGCAGGAGAAGATGCACCTGA
GACAACTTGTCATGAAGGCGATGGCTTGATGGAATGATGCGTGTAACGTG
GAGTCGTTGAAAACTGAGAACAGAGANGATGCGATATGCGTGTAACGTGA
AGTCGTTGAAAAAGAACAGAGAGACTTTAGAAGTAACATTTGTAGAGACT
AATCTTAAAGCATTTTCATTCAACGATTACGTGTATCTTGAAGAGTGCCT
CTTGTACAATTATTGTATTCATTACTTCTGGAACTATCACAAACTTATCG
TGTGTGAAAAAGCAATAGCAGTTTTATGTTAGGTGAAAATGTTTCTATCA
GCTCATCAAAGAGTTACGTCACTGCTACAGGTGTGCACATCAAAGAGCCG
CACAGGGCAACATGTGTCCTGTGCGTCCTGTGCACATCAGCCAGCCTGAC
GCCAGGTGGCGCTACTGCGCGCGACAGAATCCACACCTGCGGCATCTTGT
CACACATGTTGCCCTGTGCGGCTCTTTGATGTGCACACCTGTAGCGGTGA
CGTAAGTCTTTGAAGAGCTGATAGAAACATTTTCACCTAACATAAAACTG
CTATTGTTCAGCTTTTGGTATGTTCCCTATAAGTAGTCAAAACCTATTGC
CTGAAAAAGTTACCAAGCAGCAAGGTCTACAACAAAATAAACGTGTAATA
TATAACATTTTTCTCCTTCTTACCAGTTAATTGTAAATAGTGTGGCAGTG
TTGTTGCTCACAAAAAGTTCCATCTGAAAGACTTTCATAATTTGGTCTTA
CCCTGGTTGAATTGGAACCAACATTGTAAGCATATATGTTGATTTTACAT
ATACTTTTTTGTCAGCAAAAATTGTGTGGAACTCCTTGCAACTTTAGAGC
TATTTTTGTTGATATAGGTTTACCCTGAATTGTTAAGTGAATACAAGTAT
TTTCCATTGTTTCAATATACATGTATATGTCATCCCTGAAATTTACTTCT
CTTATTCTCAGTGCTATGAATTGTGACTTTCAGAGTCTTACAGGCGGTCA
TAGATCTTTGTGGTTAGAGTTACAAAGATGTAGTATGAACTGCAGAAAAC
ATGTCAAAAGTAGGTAATTCTTGTCATAGAAGAAGCTTTTTTAAAAAATG
TATTAATGATTTCTCTCTGTCTGTATGAATGTACATAATAAATACAAGCA
TATGTTTTGTAAGTGTAATTGTATTACTTGTGGAGAGAGAAAAGGCAACA
GACTTTGGTTATTCTGCTAGAATATTAGAGCACGTTTTTTTTACCAAATA
GCCCAGTGGGAAAAGTGCATGCTATACATTTGGGAGGTTGCAGGCTCAAC
CCCTAGCTGTGTCATTCATACCAAAGATGTTTATAGTGATACATACTGCT
TTAACTGCTTAGCACTCAGCAAGAGTAGGGGAGTTAAACACACACACCCC
TACCAGTGGACTAGTCTCCTACTGTAGTGCTTGCATAACTGTGTGACCC Coding sequence (CDS) from alignment at Sc0000086:573262..579160+ >Blg00354.1 ID=Blg00354.1|Name=Blg00354.1|organism=Branchiostoma lanceolatum|type=CDS|length=534bp|location=Sequence derived from alignment at Sc0000086:573262..579160+ (Branchiostoma lanceolatum) ATGTATTTCTGGCAACAGTGGAAGATTCTGTCCCAGTTGCAGAGGCTGCC ACGTCAGCGGCTGGTGCAGCTGACGGAAGTGCTGCAGGGCAAGGCGATGG GCGTGACGGAGCCAGCAGCCGCCACCGCCGCCGCGCAACATCTGCGACGC CGCCCCGACGCCAGCATGCAGGCCCAGACGGAGGGACTAGGCCAAGAGGA CACCATGCTAGGGCTGAAACAGGCCCAACCGACGGTATCCAGTCATCACC GGCGGGACTTCGACTCCAGCATGCAGGTACACGCCGACGGACTGGGCCAT CACGACACGATGTTCGCGGCTCACGCCAGGGCCATGTCCACCGTGTCTGA GCAGCAAGTACCGAGCGTGAGGAAAACCAACGGCAACGGGAACGAGAGGA AGGGTCGCGCCCAGGTGATCGAGCAGCTACTGTCTCCAGATGCCCCGCAG GACGTCTTGAAGCGGGCCACCGACAGACTCAACCAGCAGGAGAAGATGCA CCTGAGACAACTTGTCATGAAGGCGATGGCTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00354.1-exon-Sc0000086-1570713199:573262..573353 | Blg00354.1-exon-Sc0000086-1570713199:573262..573353 | Branchiostoma lanceolatum | exon |
Blg00354.1-exon-Sc0000086-1570713199:574096..574246 | Blg00354.1-exon-Sc0000086-1570713199:574096..574246 | Branchiostoma lanceolatum | exon |
Blg00354.1-exon-Sc0000086-1570713199:577185..579160 | Blg00354.1-exon-Sc0000086-1570713199:577185..579160 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:573262..579160 + |
Properties
Property Name | Value |
GeneID | Blg00354 |
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