|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:548813..555707- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00309.1 ID=Blg00309.1|Name=Blg00309.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6895bp|location=Sequence derived from alignment at Sc0000086:548813..555707- (Branchiostoma lanceolatum) GAGAACTTTAAGCTATATTTTCATATACAAATATACCACCGATAAGCTTC
CCCTTTCGCATTTTTAACCTCTCCATATCGACCTGTGTCTATATATACTA
ATCTCATTTCATGGACAACCGAGACGACAACATGGGGCAGTACGAAGTGT
TGACGTTTGTTCCCAATGTAATAGGTAAGTCTGAGGACTGGCATTTAAGA
TAACTCTCCAAGCAGAGGAGTGGGTCCGGCAGGTTTTTGACGTGTTTTTA
GGCGTTTTTGTCGAGCTTTCTACTTTGTCATGTTTTTTTTTTGTCTAGCC
AAGGACATTATATAATGTCCTTGGTCTAGCCAACCCACAAAAAAAACATG
ACAAAGAAGAAAGCCCGACATTAACCCCGAATTAAGGTGTATGTACCCCG
ACTTGTAGCATATGTACCCCGACTTGTAGCGTATGTACCCCGACTTGTAG
CGTATGTACCCCTACTTGTAGGGTATGTACCCCTACTTGTAGCGTATGTA
CCCCGACCTGTAGCGTATGTACCCCGACCTGTAGCATATGTACCCCGACC
TGTAGCGTATGTACCCCGACTTGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAGCGTATGTACCCCGACTTGTTGCGTATGTA
TCCCGACCTTAAGGTCTCATTCTTGTATTACTCCGAGTGGGTACCCTAGA
AGAGTCCGTTGCCCAAAATAAGAACGGCTGCATATACGTGTGTCTATATC
GGTTTAAATCCCTTTTAGCTGGCCCAGCTGATATCAAGCGTCAAACTGAT
GAAAGCTTGTTTGTAACGAAAGAAACTAACAGGTAAAGTTCGGCAGCCGC
GCGCGAGGTCGGACGTCCACAGCCGGACATTGGCGGTAATTCGGTCGATC
ACTTTCAGCTGCAAAGTACCTATTTAGGGGGTCTAGCAAAGTGCCGTTTG
TAATTGCCATAAAAAGGTATTGTATGCCAACTGGTAGTTGGCAATTTTTT
AAAATGATCTAGGGTAGATGAGCTCAACAGAGAATGAATGACATTGGTGC
ATTTCTTATAGCTTCATTGCGAACGCGCTCATGTAAAACACGTTTTANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCGTATGTACCCCG
ACTTGTAGCGTATGTACCCCGACTTGTAGCGTATGTACCCCGACCTGAAG
CGTATGTGACCCAACTTGTAGCGTATGTACCCCGACTTGTAGCGTTTAAA
TGGTCCTTTCCAAAGATACTCTCCAAGCAGAGGAANGTCCGTTTTCAGAT
ATAAACCATCATTGCATCTTAGTGCATCATTTAACATTTAAAGATGTTTA
TCAACACAGTACAGCGTGATTAATGTCCTTATGTTTTCTTCTTCAACAGA
CTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACTACCACATGCTTGATG
ACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAACGTCATCCTAGATGAA
GTAAACNTGAATTATATCAGTTGATCATCTTCTCTATCCAAATAACAAGT
TCAAAGTATGAAAGTCTTATCTTAGAAAAGAAGGCTATTGTAGCATTTCC
TCATAAACTATGTGAATGAGGCTCTCAATTATGCAAAATATGTATTCATT
TGCATATTGCTTTCTATCGATATTCCTCTCTTTCTCAGTTACCTATGTTA
CGTGTTTGAGAGTCCTATAATGGAGTGCAACAGATTTATAAACTTTCCTT
ATTAATTATGCAAATTACCTACTTATTTGTATAATTAGCATGCGATTTTG
TCAATCATCACTACCAACGATCTACCTACCAAATATTATGACGATCCGTC
AACGCTTTCTTGAGATATTCACTTTCCAAATCGGCTCCTGCAGTTCCAAC
TGCTATGGGGCCCAAACCTTCACAACATACTTCTCCCAGGTCCTATCTAC
CACTCAAAATCATGACCATAGCATGTCCACAACACGAGATATCAAACCCG
GAAGTTCCGCTGCAGTACCATAGTAAGCCATTAGGGGCCCAAAATCGAAT
CTACTCATTTTGAGGTCTCAAAAAGACCTACCCACATACCAAGTATCAAG
ACAATCCATCCAGGTACTCTCGAGTTATACTGTCTACACACACACGCACA
CACACGCACGCACACACACACACACACACACACACACACACACACACACG
AACACTGTACAAAACATACCCTTCTCGGCAAAGGTAATAATAAAACAGTG
TTACTCACATGTTACCATGTGATCGTCCGTTTTCAGATATAAACCATCAT
TGCATCTTAGTGCATCATTTAACATTTAAAGATGTTTATCAACACAGTAC
AGCGTGATTAATGTCCTTATGTTTTCTTCTTCAACAGACTATGTTCGCAT
CGTCTTGCTCCTCGTTGCCTACTACCACATGCTTGATGACCCTGTTATCG
GCTCCGTGTGCTACTTCAGTAACGTCATCCTAGATGAAGTAAACGGCTAT
GCCGCCCGCTTGTTCAACCAATGTAAGACAATGAGATCAATATATGAACT
ATTGCATTAGTTTACAGACTCTGAGATATTGCAGGAAAGGCTAGAAATAA
CACTTAATTCCTTCATAAACATCTTTTGTCGTACAAAGGAGCTAACAATA
TTATGGTAGATCCACATATCATCATGTTGGTTCAAAGACTCTGATAATTA
TCGCAAGCCATTGACAGTGTATAATGAGATCAAATCAAAAATAGTGCACG
ACTTTCTTGTATAGTAGTATAGATAAACCAGGGAGTTAGACCATAGTCAT
AGAGCATGAGGTTTACTGTTAATGTTAGCAATAGAAGATAACAGTACGTT
TGGCCGCACCGATCAATTTCCTCATTTTCGGACATTATAAAAAAATATTT
AATGTGGGCTGGGAGGAAAACTAACACATGACTATATTCAGTCCCTAGAG
TTGTGTACACCAAAGGCGCAGACAGTATTATTCCATCAGACATTGTTATC
GGGTTAATTTTCCCGTTCAGCAATTATCTTTTTGACTCCGAGAAGAAATT
GAACTTGCATGGCCTTACCTGGCCCATCTGAATTTCTTTGTTCCTTTACC
GCAACGTTTGACTTCTTTTCCTCACTCTCCTTCTTTTTTATTTGCGAGAA
ATGCCTCAGACCACACTACCCTTACAATAAAATGCAATAATCATGTACAT
TATCACTAATACATTGTTGTACCTGTACGTCTGTAGGCACTCGTTTCGGG
AGTCAGTTGGACATACTGGTAGATCTAGTGGGTACCTGTGGGCTGCTGAC
GGTGCTGTGTATGCTGTACCCGAGATGGGCCATGGTCTTCCAGGTCAGCA
CAGCACTGGACATCTCAAGCCACTGGATGCACTTTTACAGGTGCTTGTTA
GAGGGTTTATTAAGTCTATCTTTATTATACATGAATATATATATACATAT
ATATATATATATATACAGTATATATATATATGTATATAACAGAGAGAAAG
AGAGATAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGATGAGGTATCATGAAGAG
GGTTTTAAATTTCATTTCTTTATTGGATTGGAGAGTTTGATCCCACAACC
ATTGCAAACAAATAGAGCAACATTACAGCTTAACACTCCAGCTATTTCAC
CGGCACCCAAAGCTACATATGAAGGATTTTGGGCGATTTAGAATTCCTTA
ATATGTCACAGCTGTAACCCCGATTCACTAGAAAATACGGACCGTCCCAA
TACACGATAATGGCTGTAAAGACTATTACTTTGAAATGAAGATTCGGGGT
TTACCTGTTACAACTTTTCTTTCCCCGAAGCACAATCTCACTGATGAAGT
CTGCGACCCACAAGATGGCAAATTTCGCCAGCCCACTCCTGAACCTGTAC
TACTCCAACTCGGTCAGTATTCAGAGTGTTAACATTTCATACTTCATGCT
GAAATACATTGTGTAGATCAGAAGCTATCACTACTAGCTGTGACAACGAC
CTTATCTGCATGTTGACGATGACCTTTGTTGCATTTTCATTCCCAGAAGG
GCTAAATGCCGTGCGTTTAATAAATAAAAGGGAAAAAGACAAGCATGTAC
TATTTTACAATTTGTACCACTAAGTAACAATCAGATAATATTTTGTGGTT
AATTTGGGGGTATATAAAGGGTTTGGGGTATCATTTGAAAACTTGCACAG
GCTGTAGAGACATGTCACATTTCTTCACATTCCAGCACTTTATGCGTGTC
ATGTGCATTGGCAATCAGGCCTGTTACATCATGTTGTACCTGCGGTACTT
CACACCAGGACCATTTTGTGAGTCATCCGCCATTCAATGTGATTTGTATA
ATATAAATGAGACAAAACTGTATGAAGTTGTGTTGACATTATTAAATGAT
GTGGCNTTTATTAGATGATGTGGCGGGAAGGTTATATATAGTAGTTTTAA
ACTCTGAAGATAAAAGCATTCCAGAGAAGGCATATGAAACTTCACATTGA
CTAAAATTACTTTTCTGGTAAAAATATTTTAACACAGGTTTGACCAATCC
TCTGCTCTTCTTCCAGATAACTGAGGACCCAGTTGCTCGGCACACGTCAC
CTCCCGAAAGTGTAACGTAAGCATGAGGTCAAAGGTGGTTGAACGGGGGC
CGGTACAGACTTTCAACCACCTTTGACCCGGTGCTGACGTCACATTTCTA
GAAAGTGGTGTCTACTTAGCAACCGGGTCCTCCGTTATCCTGAGGGTTGG
AGTGAAATGCTATTCCATGACGTTACGTACCAACACAATTGACCTTTTAT
GTTAGATCTCTTTCAAAGTTTTATTTCACTTTTGTCCATGTGAAGGGCCA
TTCACGAGAGTCGGTCTGTATGCAGTACTCTTCTACCTGTGTCTCCCTGT
GGCACTGCTGAAGGCCTACATCAACTGTGTGCAGCTGCAGGAAGCAGTAA
GGACAATCACTGAAGTGGACATGCAAGAGAGAAAACAAGCGCTGGCATAT
TAAAGACAAAGACATTACCAGAACAAACCGGAAAATCCTTCCCAAATGGA
TTTCACTTGGAGAGGGTTTTTTCCAGGTTATTGGTGGATTGAAGACGAAA
CGTGGAAGCTCTGCATGTCATAAGACAGCGGGCCAATCGCGAGTCTCAAA
ATACCAGAAAGAGTTTCTACTTTCTGCCGTATCTTTCACGTGATGACTGG
TGTGCGCTTAGGTAGTGGACCGCTTCATCTGCGAGGCAAACTAGTGGGCG
GATAGCTTTGTTTTTTTTTTTACATAAAATAATGTACATCCGCGCATACA
AAGGCTGCTTCAGACAGATTTGGTTGAAAGCTTATAAACAATACATCCTT
TCCCAACATTCTATAATTTCATGTATAGTGTGGATATAACGGTTACGTCC
TGTTTACATTTTTGTCCAGCATACTACAAGGCAAAGATGTTGCAAACATG
TATTTTCTTGACATTATCATATCTGGACTTGCAAATGTAACACTATATAG
GGTCAGTATATCATAGTTTTCTTTAAATTATAAATGTACGTGCGTTATAA
TGTGCAACTTGCTTTTCCGGCCTGGAACATTAATACGGAAGGAAGGGGCA
AAAATATGGATAATAACCCTCTGATCCCGCGGCCTCAAAAAGGCCATGGG
ACTACCTGTACGAGTGTCTTTATGACGTGGAAATAGGATATGAAGTAGAT
TAATCATGCTGTCGCGAAAGTAGCAACTTAACTCTTGATGCACATAGAGA
CACGCCAGTTGTGAAGTACCTGCTGTATGTAGAATATCTAGAGACGACTA
CAAATGCTGCATTCACGTGGGAATAAAAAGTGAGGTCAAAATACT Coding sequence (CDS) from alignment at Sc0000086:548813..555707- >Blg00309.1 ID=Blg00309.1|Name=Blg00309.1|organism=Branchiostoma lanceolatum|type=CDS|length=501bp|location=Sequence derived from alignment at Sc0000086:548813..555707- (Branchiostoma lanceolatum) ATGGACAACCGAGACGACAACATGGGGCAGTACGAAGTGTTGACGTTTGT TCCCAATGTAATAGACTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACT ACCACATGCTTGATGACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAAC GTCATCCTAGATGAAGTAAACGGCTATGCCGCCCGCTTGTTCAACCAATG CACTCGTTTCGGGAGTCAGTTGGACATACTGGTAGATCTAGTGGGTACCT GTGGGCTGCTGACGGTGCTGTGTATGCTGTACCCGAGATGGGCCATGGTC TTCCAGGTCAGCACAGCACTGGACATCTCAAGCCACTGGATGCACTTTTA CAGCACAATCTCACTGATGAAGTCTGCGACCCACAAGATGGCAAATTTCG CCAGCCCACTCCTGAACCTGTACTACTCCAACTCGGGCCATTCACGAGAG TCGGTCTGTATGCAGTACTCTTCTACCTGTGTCTCCCTGTGGCACTGCTG A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00309.1-exon-Sc0000086-1570713199:555534..555707 | Blg00309.1-exon-Sc0000086-1570713199:555534..555707 | Branchiostoma lanceolatum | exon |
Blg00309.1-exon-Sc0000086-1570713199:553268..553308 | Blg00309.1-exon-Sc0000086-1570713199:553268..553308 | Branchiostoma lanceolatum | exon |
Blg00309.1-exon-Sc0000086-1570713199:552186..552279 | Blg00309.1-exon-Sc0000086-1570713199:552186..552279 | Branchiostoma lanceolatum | exon |
Blg00309.1-exon-Sc0000086-1570713199:551318..551471 | Blg00309.1-exon-Sc0000086-1570713199:551318..551471 | Branchiostoma lanceolatum | exon |
Blg00309.1-exon-Sc0000086-1570713199:550746..550827 | Blg00309.1-exon-Sc0000086-1570713199:550746..550827 | Branchiostoma lanceolatum | exon |
Blg00309.1-exon-Sc0000086-1570713199:548813..549812 | Blg00309.1-exon-Sc0000086-1570713199:548813..549812 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:548813..555707 - |
Properties
Property Name | Value |
GeneID | Blg00309 |
|