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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:419526..426483+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00542.0 ID=Blg00542.0|Name=Blg00542.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6958bp|location=Sequence derived from alignment at Sc0000042:419526..426483+ (Branchiostoma lanceolatum) GTCCAAACAACGACTCACTCCTTTCCGGACTACTTTGGGCGACGGTGCCG
AATGGAGAATATCAACGGCTGTCTGAGCGTAAGTTCGGCAAATATTTGTG
ATTCGAGTTCGATGCGAGGGTCTGTCGGGGGGCGGGCAATGTTTAACGGT
AGATTTAAGGCCCCCTCTCATTGGGCTCCGGCACTGCGGCGGCACTGCCG
CGGCAGCTCATGACGGCACAGTCGCGAAGTTTTCATTTGCACTCTCACTG
ACGTGCGGCGCATTTGCGTTTGAAGCCCAGATGAGTGAGTGCCTGGTGTG
TTGTGTGTGGTGTCGATCCTTTTCAACTTCTAGACAACGTGCGCTGATTC
TCAGTGTAGTTATGCCTTTTACAAACGGTTTATTATGAATTGATGTGATA
TAGTCTTCCCTACCAAAGTGATTTTTGATTTTATAAAATGTGTGGTGTTT
ACTAATATTTCTAAGTGGTTCCCTCCAGCCAGGGAGAAACGTGAGTTTCA
CACTTTCTTTAGATGTACTGTATATCCAAAACTGTTGGTATTGACTGCGG
GGCAAAGCCAAACATGTCTACATAGTATGTCCTAAACGTGAGTAGCCCAG
TCATCCCAATGAAAATATCAGAAGATCTACAGCTACAATCCTCAACCTCA
TTACAATGCAGTAAATTAGGTTTAGCCAAACTCTTAAACAGATCAATAGC
TAGGGAAATGGACCGATTGTAGTTTGATGGTAGTGATTTCAATTAATCAG
AAATCACAGTGCTGTCAACGGATCAAAATACAATGAAAAATGATACAAAA
ATGCATCAAAAATTGATTTCAAGTGATAAAAGGATTTTAACTTATGACAC
TTGGTGCAACAAAGGTAACATGTTATAGAATATACGTATAACCTTGAAAC
TGACATATCACTTTTTACACAATAGCGCGCGCGGTGAGCTCCCGGCAAGC
TCCCGGCGAGCGCGCGGCACTTTGCCACTTGCGTTTTATTAAATTAAATT
AAAAAAAAAAAATCGCCATTTCAACCGGCACGCCGGAACGGCACTGGGAC
GTCACTAGGACGGTACGCCGAGGTCTGTGCACGGCACTGCGGAGGTAGCT
ATTTCCACGCTACCGCACGCTACCGCCACAGTTCCGCAGCTCAATGAGAG
GGGGCCTTTAGGGGGACCTGCGAAGGTGGCGTCGCGGTGGCGCAGTGGCA
ATGTGTTTGGCCCGGAACCCAGAGGTCATGGATTCAAATCCGGGGTCCCT
GATTTGTGTTGCTGACGTTGTGCACTTGGGAAAGGCACTTAACACGACTT
TCCCTACTTCACTGAGGTGAAAATGAGTATCTAGCTTCGGTTAGGGAAGT
CACTGGGATAGGACGTTAAACGGAGGTCCCGTGTTTGAGGAGAGCCACGC
CTCGAGCACGGAAAAGGATCTACCACGCTTATTGAAAAGAGCGAAAAATG
CGAAAATACATCCACCGCAAACACTTCCACCTTTACAGTATCAATAGCAG
ACCGGCTGCGATTAACGGCAAATCAATGCAAATTACATTTGTATCTCAAT
GAAACAAAAAAAATACACGTCAAAAACCAGCCGGACCCACTCCTCTGCTT
GGAGAGTACCAACTATATTCTTATCAATTCTCAGATGTCCCGGGATACTT
GCAAGCCTCCCAGTGGGCGGGGCTATGACGTCATCGAGATAGACAACCTG
CGATTGCGCACAGAGATCGGCTTCAGTCAACACGAGATTGGGAAAAAACA
GGAAGTCGTCATCAGTTTGCGCCTGGGTTGTGACGTGAGCAAAGCGGGTA
AAAGTGATGACGTCAGCGATTCCGTGAACTACAGGGATGTTGCCAAAGAC
GTCATCAACTACGTGGAGTCGGCGTCTTTTAATTTGGTGGAGAAATTAGC
GACTGATGTTGCTAGAATCTGCATCGCTGTCCACAAGGTACGTGTGATTT
GTGTAACGTACTTGACCACATTTTTTTCCGAACTTTGAAAGTTTTCAACA
CACAGAAACGTCTGCAGTATCGTCTCTGAATATCATCTAAGAGGTCCGTT
ATGACGCAAAGCAAAACCATGCTCAAATATTACACATCTTTACAGTATAT
CACACGATATATCTATTTTTGTACACTCTATCCAAGGCAATGGGGCTATA
GGGAGAAACCTCATTGCTCTATCTACATGTACGAATGTCGTCAGGAGGAC
TATATTTGTTGTGGCGTTTGTAACTAAGTGACTTTGTTTGTGGATTAGCA
ACATAACTCAAGAAGTTTAAGATAGAATATTGTAAATGGTTAACTCGTGA
TTTATTGAAAAATATGATACGATTTTTGGGGCCCTGGCGGCTATCCTTGG
CACTGCAGCAGAACATTTGTATCTTATCTCACATGTCTATAGGTCCCGTG
GGTCCAGGTTCGAGCCCACAAGCCGCAAGCGCTGCGCTTCTCTGACTCCG
TCGGCGTCCTGATCGAGAGAACGCCGGAGGATTTCGACGACAGCGTGGTC
TACCTCTCCCTGGGGTCCAACATCGAGCCCAGGAGGAACCTGAGGGATGC
CCTCGCATTGCTGAAGGAGAAAGTCTTGGTGCTGAAGGTGTCTTCGCCGT
TTCTTACCTCGCCTCAGCTCCAAACCGACCAGCCAGACTTGATCAACATG
GCGGTTAGGATCCTGACGGGAATGGCGCCGGCACAACTCAAAACCGTTCN
TGGAAATGTCTTCTAACCTTGACCTATGACACGATGACGTGAGCACTACG
CGGGTGGTGTAACCTCAAACCGTGGTCTTGGTTATTACTCTGAGTGGGTC
CGTTTTCTGTGAAGTCCGACAGCCATCTTAGATTCGTGAAGACTCTTAGA
CTCTTACTAGTATCTCTACTTTGTATCACTACTTGAATTAACTAAGAATA
TTTATATGTGTAAGCAAAATTATATTATCCTTTTTTAACACATCTGTGAT
ATTTCCGACGGCATTATCAGATTTACATGTATGTTTTATACATGATGCCT
AAGACCCCGTCACGCGAATCGGAGCAGTGTCCGATGGGAAACGACCCTCG
GCACCAGCACCACAGAGCCTTTGTTTCTGACAAACACTTAGATTTTAATT
TCTGGTTACAAATAGCCGAACAGGACTCCCGAACACCTAGTATTTGTTAG
CATTCTTGTTCAATGAGATGTATACTAACATCGCTCAAGGCATTGCTTGT
ACACAGTTGTTAAGCTCTTAAATGCTTGAGCTCAGGTCTTTTTGTGCACA
GCTCTTGACTTTTTTCAATCAAGTTGGTACCTAATCCGGCTCTTCTTTGG
CGCACGTCCCTTTGTTCCGACGGAATTACTTGTAAGTCGGGATGAATTAT
TTTCGTGCTCAAAAGGCCTGAGAAAATGTTGAGAATTCTCTGATGACGTT
TGACCCCTTAGCACACATTCAGGACCCTCCTACGACCTCGCCCGCGGTAC
AAACTCCCAACCTTGGTTTATAAGCAGTAGGACCAATTTTGAGACACGCC
ATGGACGACTAAGTTCCTCGAAAGGACAACAGATTGACAATCTGGTGGTC
GTTTTGGGGCCTCTCTTGTTGCGGCCGGGAGTGCCATTGGCCATAGCAGC
TTATTCATACATACATACATACATACATACGTACGTACATACATAGTCAG
ACTTATAATCAGGCTCTAATAGGTATGTTGTATACACGTGTGACAATGTT
GTCCAACCGGTTTCTACATTAAGCAAAACCCCGTCCAAACAACGACTCAC
TCCTTTCCGGACTACTTTGGGCGACGGTGCCGAATGGAGAATATCAACGG
CTGTCTGAGCGTAAGTTCGGCAAATATTTGTGATTCGAGTTCGATGCGAG
GGTCTGTCGGGGGGCGGGCAATGTTTAACGGTAGATTTAAGGCCCCCTCT
CATTGGGCTCCGGCACTGCGGCGGCACTGCCGCGGCAGCTCATGACGGCA
CAGTCGCGAAGTTTTCATTTGCACTCTCACTGACGTGCGGCGCATTTGCG
TTTGAAGCCCAGATGAGTGAGTGCCTGGTGTGTTGTGTGTGGTGTCGATC
CTTTTCAACTTCTAGACAACGTGCGCTGATTCTCAGTGTAGTTATGCCTT
TTACAAACGGTTTATTATGAATTGATGTGATATAGTCTTCCCTACCAAAG
TGATTTTTGATTTTATAAAATGTGTGGTGTTTACTAATATTTCTAAGTGG
TTCCCTCCAGCCAGGGAGAAACGTGAGTTTCACACTTTCTTTAGATGTAC
TGTATATCCAAAACTGTTGGTATTGACTGCGGGGCAAAGCCAAACATGTC
TACATAGTATGTCCTAAACGTGAGTAGCCCAGTCATCCCAATGAAAATAT
CAGAAGATCTACAGCTACAATCCTCAACCTCATTACAATGCAGTAAATTA
GGTTTAGCCAAACTCTTAAACAGATCAATAGCTAGGGAAATGGACCGATT
GTAGTTTGATGGTAGTGATTTCAATTAATCAGAAATCACAGTGCTGTCAA
CGGATCAAAATACAATGAAAAATGATACAAAAATGCATCAAAAATTGATT
TCAAGTGATAAAAGGATTTTAACTTATGACACTTGGTGCAACAAAGGTAA
CATGTTATAGAATATACGTATAACCTTGAAACTGACATATCACTTTTTAC
ACAATAGCGCGCGCGGTGAGCTCCCGGCAAGCTCCCGGCGAGCGCGCGGC
ACTTTGCCACTTGCGTTTTATTAAATTAAATTAAAAAAAAAAAATCGCCA
TTTCAACCGGCACGCCGGAACGGCACTGGGACGTCACTAGGACGGTACGC
CGAGGTCTGTGCACGGCACTGCGGAGGTAGCTATTTCCACGCTACCGCAC
GCTACCGCCACAGTTCCGCAGCTCAATGAGAGGGGGCCTTTAGGGGGACC
TGCGAAGGTGGCGTCGCGGTGGCGCAGTGGCAATGTGTTTGGCCCGGAAC
CCAGAGGTCATGGATTCAAATCCGGGGTCCCTGATTTGTGTTGCTGACGT
TGTGCACTTGGGAAAGGCACTTAACACGACTTTCCCTACTTCACTGAGGT
GAAAATGAGTATCTAGCTTCGGTTAGGGAAGTCACTGGGATAGGACGTTA
AACGGAGGTCCCGTGTTTGAGGAGAGCCACGCCTCGAGCACGGAAAAGGA
TCTACCACGCTTATTGAAAAGAGCGAAAAATGCGAAAATACATCCACCGC
AAACACTTCCACCTTTACAGTATCAATAGCAGACCGGCTGCGATTAACGG
CAAATCAATGCAAATTACATTTGTATCTCAATGAAACAAAAAAAATACAC
GTCAAAAACCAGCCGGACCCACTCCTCTGCTTGGAGAGTACCAACTATAT
TCTTATCAATTCTCAGATGTCCCGGGATACTTGCAAGCCTCCCAGTGGGC
GGGGCTATGACGTCATCGAGATAGACAACCTGCGATTGCGCACAGAGATC
GGCTTCAGTCAACACGAGATTGGGAAAAAACAGGAAGTCGTCATCAGTTT
GCGCCTGGGTTGTGACGTGAGCAAAGCGGGTAAAAGTGATGACGTCAGCG
ATTCCGTGAACTACAGGGATGTTGCCAAAGACGTCATCAACTACGTGGAG
TCGGCGTCTTTTAATTTGGTGGAGAAATTAGCGACTGATGTTGCTAGAAT
CTGCATCGCTGTCCACAAGGTACGTGTGATTTGTGTAACGTACTTGACCA
CATTTTTTTCCGAACTTTGAAAGTTTTCAACACACAGAAACGTCTGCAGT
ATCGTCTCTGAATATCATCTAAGAGGTCCGTTATGACGCAAAGCAAAACC
ATGCTCAAATATTACACATCTTTACAGTATATCACACGATATATCTATTT
TTGTACACTCTATCCAAGGCAATGGGGCTATAGGGAGAAACCTCATTGCT
CTATCTACATGTACGAATGTCGTCAGGAGGACTATATTTGTTGTGGCGTT
TGTAACTAAGTGACTTTGTTTGTGGATTAGCAACATAACTCAAGAAGTTT
AAGATAGAATATTGTAAATGGTTAACTCGTGATTTATTGAAAAATATGAT
ACGATTTTTGGGGCCCTGGCGGCTATCCTTGGCACTGCAGCAGAACATTT
GTATCTTATCTCACATGTCTATAGGTCCCGTGGGTCCAGGTTCGAGCCCA
CAAGCCGCAAGCGCTGCGCTTCTCTGACTCCGTCGGCGTCCTGATCGAGA
GAACGCCGGAGGATTTCGACGACAGCGTGGTCTACCTCTCCCTGGGGTCC
AACATCGAGCCCAGGAGGAACCTGAGGGATGCCCTCGCATTGCTGAAGGA
GAAAGTCTTGGTGCTGAAGGTGTCTTCGCCGTTTCTTACCTCGCCTCAGC
TCCAAACCGACCAGCCAGACTTGATCAACATGGCGGTTAGGATCCTGACG
GGAATGGCGCCGGCACAACTCAAAACCGTTCTGTGTGGAATAGAGAAGTC
GCTGCTGCGCGTGCGCGACCCTAACAACAAAAATGGCCCCCGCACAATCG
ACCTTGACATCTCGCTCTGGGGGTCAGAAGTGCTGGAATACAGCGTTGTC
GATAAGAAAGCGGGATCCAAACACAGCTTACTTAACGGCCACAATAAGAA
AAAAGTACCCGACCCAGACATCCTTCGGTTCACCCATGTCGTCGTGCCAT
TGGCTGAGATCTCTCCCCACATGAAGCATCCCACCAATGGCAGCACGCTA
GCCTCTGTTGCCATGGAGATGACGGGTCGGAAGGATTATCATAAAACGTT
CCCCATCATAGAGCTCTTCCGTTAGACGTTAAACTTAGGGCCCGGTCACT
TTCGGCGTACGGTTGTCTTACGATCGCAAACTGAGAGCAATCTTGGGATA
GTCGCTCATGTAGATCTGATCACTGAGCACATTCATTTAGTTAGTTCATG
TATTGGTAAGCTGGACTTCTGTGGTATATAATTCAGTTGTCTTGCTACGG
AAAAGGCT Coding sequence (CDS) from alignment at Sc0000042:419526..426483+ >Blg00542.0 ID=Blg00542.0|Name=Blg00542.0|organism=Branchiostoma lanceolatum|type=CDS|length=981bp|location=Sequence derived from alignment at Sc0000042:419526..426483+ (Branchiostoma lanceolatum) ATGGAGAATATCAACGGCTGTCTGAGCATGTCCCGGGATACTTGCAAGCC TCCCAGTGGGCGGGGCTATGACGTCATCGAGATAGACAACCTGCGATTGC GCACAGAGATCGGCTTCAGTCAACACGAGATTGGGAAAAAACAGGAAGTC GTCATCAGTTTGCGCCTGGGTTGTGACGTGAGCAAAGCGGGTAAAAGTGA TGACGTCAGCGATTCCGTGAACTACAGGGATGTTGCCAAAGACGTCATCA ACTACGTGGAGTCGGCGTCTTTTAATTTGGTGGAGAAATTAGCGACTGAT GTTGCTAGAATCTGCATCGCTGTCCACAAGGTCCCGTGGGTCCAGGTTCG AGCCCACAAGCCGCAAGCGCTGCGCTTCTCTGACTCCGTCGGCGTCCTGA TCGAGAGAACGCCGGAGGATTTCGACGACAGCGTGGTCTACCTCTCCCTG GGGTCCAACATCGAGCCCAGGAGGAACCTGAGGGATGCCCTCGCATTGCT GAAGGAGAAAGTCTTGGTGCTGAAGGTGTCTTCGCCGTTTCTTACCTCGC CTCAGCTCCAAACCGACCAGCCAGACTTGATCAACATGGCGGTTAGGATC CTGACGGGAATGGCGCCGGCACAACTCAAAACCGTTCTGTGTGGAATAGA GAAGTCGCTGCTGCGCGTGCGCGACCCTAACAACAAAAATGGCCCCCGCA CAATCGACCTTGACATCTCGCTCTGGGGGTCAGAAGTGCTGGAATACAGC GTTGTCGATAAGAAAGCGGGATCCAAACACAGCTTACTTAACGGCCACAA TAAGAAAAAAGTACCCGACCCAGACATCCTTCGGTTCACCCATGTCGTCG TGCCATTGGCTGAGATCTCTCCCCACATGAAGCATCCCACCAATGGCAGC ACGCTAGCCTCTGTTGCCATGGAGATGACGGGTCGGAAGGATTATCATAA AACGTTCCCCATCATAGAGCTCTTCCGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00542.0-exon-Sc0000042-1570713199:419526..419603 | Blg00542.0-exon-Sc0000042-1570713199:419526..419603 | Branchiostoma lanceolatum | exon |
Blg00542.0-exon-Sc0000042-1570713199:421160..421462 | Blg00542.0-exon-Sc0000042-1570713199:421160..421462 | Branchiostoma lanceolatum | exon |
Blg00542.0-exon-Sc0000042-1570713199:425650..426483 | Blg00542.0-exon-Sc0000042-1570713199:425650..426483 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000042 | genome | Sc0000042:419526..426483 + |
Properties
Property Name | Value |
GeneID | Blg00542 |
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