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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:337534..343771+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00516.8 ID=Blg00516.8|Name=Blg00516.8|organism=Branchiostoma lanceolatum|type=mRNA|length=6238bp|location=Sequence derived from alignment at Sc0000042:337534..343771+ (Branchiostoma lanceolatum) AACAGTCATAAATCAAATGATATATCCGATCTTTGAGCTTTCACAACTCC
TGCAGACCTTTACTTCCGGGTAATTTGGCGGGAAGACCTACTTGGAAGGG
TCGTTTCTTTAGCTTCTTGGACAGGTAAAGAAGTAAGAATGAAGTCTTAC
CTGTTATCTGGATTAAAATAGGATCAGTGGAAGCCCAGGCGGCGACAGGA
GAGAGATTAAGAAACACGAGCTACAAGTTACAAGTTACCGTGTCTGAATG
TGCTGCTTAGGAAATGAACACCCCTTTCTCAGGCTCCCGTCCGATTGGTC
AATTTGTGGAAAGGAGTATTTTTGGAATGGGGAACTTTTCCGTCACTTCT
TGTATGTTAATATTTTGAACAGTCTTAAAGGGATACGCTAGTAATGTAAA
AAATGAATGATTCATGATAATAATGAATTATATTTGCTCATGAATAAAAT
CCATTTTGTGCATGGAAACATGGTTTTGCAAAAATAATAAGAAACACCCC
TTTATCTAAAATAGATTCAGCCGATACTGTCATGGCGGCCGCTTAAAAAA
AATCACGAGAACGCTGAAAACACATCTCATCAGGGGCGATTTCCTCGAAT
TTGTAGCAGAATTATCAACTTTCTTGTATCTTCTAGAAGTTAAGGTACGT
TATTTAAGTCCTACTTTCCTTACCTTAAGTACGTAGATTGAAATAATGAC
GTATAATATGTGACGGCAATCGGACCTGCATGAGAAATATTATATGGGGT
GGGGGGTTTGTTTTGTTCCACCCTTTGTCATATTTATTTATTTCTTTGTC
ATATTAAAATCATAAAATGCCAGCCTTTTCTTATCGCATATCTAGCTTCA
TAGCTTCATACTATGTCGCATGCTGAGTATGTGTTTGCCTCTGCTACTGA
CTGCCAGGGCAAAATGAGAATTTTTTTTCAAAGAAGGTGCAAATGATTGG
AAAGTATAAAATGATTTTTATCTTTCATCACATAGCTTCAGAAGTTAAGA
ACTTAAGATAGTGGGAGATATATTTAAGAACTAATGGTGAATAAAATGTG
CAAAGTGTTATGATAATTTGAAATGATAAACTTAAAGTTAAACTTTAATT
TTTCATCACAGAACTGCAGAAGATGGCAGAAGGTGAGGGTGAGGCCGGGG
TGAGCGCCATGCCCCTCCCTCCCATGCAGTTCGTCAGCCAGTACACGACG
GAGAACGTTTCCCGCGGCCTGGCGCCCCCGCCGCCTCCACCAATCACAGA
CCAGTACTCCATGTTCGGCAGCGACTACCAGGTGGACGACCAGATCATCC
GACCGCTGGAGTCACAGGTCGGAAGGGAAAGACACGCTGTTTCCATAAAA
ATACTCTTTACTAGTACAAGGGCTGCCGAAACAGAGATGGGCACTGCCTT
ATGCACCTTCGGTGCGGGGAGGACTTTAATCCTGAAAGTGAAAGGATGCA
TCCGTGAATAAGTTTGTATATCACTAGTACTTGCCAATGCTTTTATGACT
GTTTGTCACCTTCCTCAGGGCAGTACTGACTGGTTCTACTTGCAAACCCA
AAAGTCACTGAGTTTGTATCCCCCTCATCATCATCAATGTACATGTAGAA
TTTACTCTAACACTGCCTTCCTCTGCAGGGAATCCGTCGTCTCCACCCCG
ACAAGTTTGACCACAAGCTGGAGCTGAAGAAGCTGAACCACTCCATCCTG
GTCAACTTCCTGGACCTGCTGGACATCCTCATCAAGTCACCAAACACCCC
GCGCAGGTCACTCTTTGTTTTATGTATCTGTATCTGTAACTGTATCCATA
TTGTAGGGCTTAGACTGAGGCTGGATATCCTCATCAAGTCACCAAACACC
CCGCGCAGGTCACTCTTTGTTTTATGTATCTGTTTCCATATTGCAGAGCT
TAGCTTGAAAGTTTACCGGTGTTGGTAGACATCACAATGCAGCAAAACTG
AACTGTAACTTTCAATACAAAAAGGAGACTTACCCATATTTTTGACTGTC
CGACTCCAGTCTTTGTCCAGAAATGTGCAACCCACAATGCCACATTATGT
AGGCAACAAATGAATTGGTCAGTAGTTGATCATAAACTACATGTACCATA
ATGAAGATTTTGATTCTATCATCTTTTTTTTATTTATTGCTTTATATGGC
CGTGGAAGAGGAGTTAAAGTTTAAATAAGAAACCATAGATACGATTTGTT
TTACGTGAATTTTTGCTTGTGTTTTCCTGTGTCTTCATCAAAAAGGGAGG
AAAAGATCGATGACCTGAACCTGCTGTTCATCCACATGCACCACCTCATC
AACGAGTACCGGCCGCACCAGGCGCGGGAAACTCTCCGGGTCATGATGGA
AGTGCAGAAACGACAGAGGCTGGAGACGGCTGACAGGTCAGTACAGTCGG
GCCTAACCATAACCACAGCCCTAACCCTAGCCCTAACCACAGCCCTAACC
CAACGAGTGCCGGCCGCACCAGGCGCGGGAAACTCTCAGGGACATGATGG
AGGTGCAGTAACGACAGAGGCTGGAGACGGCTGACAGGTCAGTAATAACC
CTAACCTGTACCAGTGTTCTCGCCAGGCCTTTTCAGCATAGGGGCCCCCT
ATGCTGTGATTTGGACCCCCTATGCTGTGATCTGGACCCCTATGCTGTGT
TTCAACCAGCATAGGGGTGCTTCTTTCTGGGACAAACCTTGTGACCCTTC
ATAAATCTTATAAAAAGTTCATATTTGGCTTTAGAATGAGGCTGTGACAG
AGGAAAAACTCTACTTCACAAAATTTGTCCCTCAAAATGCATGAAATAAT
GTCTCATTGGGTTATGAATTTACAAATTTTCCAGGAGAACATGCCGGACT
CCCTACTCTGGTCACTCCACGCATGACTTGCACCGCGTTAAGTTGGCCTT
CTGTACCTGACCCCTATGCTGTGAAAAAATCCTGGTGAGAACACTGTGTA
CCCTAACTCTAACCTAACAAGTACCGGCCGCACCAGGCGCGGGAAACTCT
CCGGGTTATGATGGAGGTGCAGAAACGGCAGAGGCTGGAGACAGCCGACA
GGTTTGTACAGATGTGCCCAACTGTAGTGTTAAAAGGAAAACAACAATTC
CTCAACCACCACTTGCTAACCACTGGTCTGCATTCTGGCTATGCAGCAGT
ACCACCTAGCAGATTATGTAAGAACTGCAGCATGATACAATGATTCTGTT
TTCCCCACCCCAGGTTTCAGCAGCACCTGGACCGCGTCATCGACATGCTG
AAGCAGTGCGTGCAGTCCATGCCTGAGGACATAGGGGGCGCCTCTGACAG
CGAGGACATCAAGCCGGACCTGGAGGAGCTGAACAGACAGGCGGGGATCT
CGCAGAGCAAACGTGACGAGGACTATGGGAAAGACAGACTAATGTGCAGC
ATAGTGGACAACATCAAGTCATGATGAACATTCTTAGCTTCCAACCAGGG
TTGAACAAGTTTTCAAAAATTCACTTGCCCTATCGGGCAAGTAGAAAAAA
AATCTACTTGCCCGAACCAACTTTTGACTTGCCCGAAATCTAAATGACAT
TTTTTCTTTGCATCTTTGCTTGCGGTAATGAATTCTGTTATTTTTCAGTA
AAAACGTCTTGTTAAGCATGTAATTATAGCAAAAAAGTTTTAACTACAAG
ACCAAGCTGTGTGGATGTCATGACCGTATTTACGGGAAATGACAAAAACT
TGAACAAGAAGCATGATATTACAACGTATCTTCTTTCACTTAAACCACGC
CAATTTCATTTGTTGCTTCTCAGATTTTTCAGAATAAAATCAGAGCGATA
CGGAAAAAAAATTTGGCAAAAAGTCTAAGGTAAAGACACAGGCTTATTTA
ACATAAAGAACAACATTCAAGTTTTCAGCAAATGTTGTGTATCGATCATT
CCTTAGATCCAGTACTACAATATTCCTGTGTTCACTGAGGGCTATTATTA
TTCTCCCATTTCTTTAGTAAACAGAAGAAAAAATCAGGTATTTGTCATAT
GATGGAAAAGTTACATTTAGAGTGTTGTGGATCTAATATAACTAAACATG
GTTCTTATGATATGGCCAGTTTTGAATCATTGTCGTAAAATTNAAAAGTT
ACATTTAGAGTGTTGTGGATCTAATATAACTAAACATGGTTCTTATGATA
TGGCCAGTTTTGAATCATTGTCGTGAAATTTTTATTTTCTAGATAACATT
AGTCAATATCAATCCACACATGTACATCAAACAACACCTTCAAATGATTT
TTTGCAGTATTAACATTTAGAAGTTGAACAGAAATTTAGAATATCCTGAA
TATACACTCAATCAGTTAAAATGTTGTGGGAACCCTCAGAGTGTGTCATA
TCCACAATGTTGCTGTTCAATGAAAGAAGGAAAATGCTACATTGAGAGAG
TGCTCACAGGGATATCATGTTTCAAAGGATTTGATGTTGCAAAGTTTCAT
GCCAGCAGGTCTACGAACTGAGAGAGCCATGGGTGTTTGTTTACATGTAC
TATGTGAGCCAAATTGTCCTGTTTTGGGTTGAATTCATAATCTTTTGGAA
TATTTTGAAAGAAATGTAGTTTCTAATGATAAGATACATTGTGGTGTGGT
GTTTTTGTGATCCTTTCACTGGAATAAAGTTTGTTTTGAAACAGACTGCA
TGAAAAAATCTTACTTGCCCGATCGGGCAAGTGGGGGAGGATATCCACTT
GCCCGAACAGCACTTTCACTTGCCCCGGGCAATCGGGCAACCATACTTGT
TCAACCCTGCCAACACAAGGAGTCTGTCTGATTTTGTAGATTTGCACTGT
ACCCTTTATAGGCCATATTGTATCCAGTCTGACTATGGAAAGACAGAGTC
ATGTACAGCATAGTGGACAACATCAAGTCATGATGAACATTCTAAACTTC
CAACCTCCAACACAACAAGAAGTCTGTCCGATTTTGTAGATTTGCACCGT
AGCCTTCATAGGCCATATTGCAGACAGTGGAATTATGAGTAGGCAAGAGA
CACATGCTATGAAAACGCATATGGGGCCGTGCATACTGTGTCCGGTCTGA
CTACGGAAAGACAGATTCATGAAAAGCATTGTGGACAACATCAAGTCATG
ATGAACAGCTGAATATGTTTGGCAACATAATTAAGTATATAAGAATAAAT
ATTGTCAGTATTGTTCCCAAATCTAGTTAGCTCACGAGCTGATCTTCCAT
TGGTCGTAACAGGAAAAACGATATGTACAGATCATACAGTTTCATTGAAC
AGGCAAATTCCCCTAGCCCTTTTTGACAAGTATACTGTATTAGCATACAG
TTGAGAGCCTAACAACTCTGACTTTTAATGTTAGGGATGAAATAGGTCTC
AAGCAAGGAGTGACTGGAAATCAGTAAGTGGACTACTGCTGTACTGATTC
CTACACCATGTTTGTCATAGCCTGTGTTACCCAGTTTCTCACTGCCAGGG
ACTAATCCCCCTCCCCAAGACCCACAGTCAAGCGAGCCACTAGGAGCATG
AACAGTAAGGCCATGTGGTCCATATCTGTTTCTCATTGGCCCACACCTCT
GTGCAAGCACTACAGCAAGGGACTGGCTGAGTTCTCTACATGTCCCTACT
GGGCCATTGCAGCAGTCAGTGAACAATATGAAGGATGTGTTCACCTGTAC
ATACCGATCACATACATGTAGATGTATCCAGTAATATCACCTATTTATTA
GGTGCCTTGAAGGCAAAGGAGATGCAAAACGGAATGGGCATTAGCATAAC
TGCAAGATTTCATGCCAACTAGACCAATGACATTATCCAGATTTGTCATG
TCCTTGACTGGACCAAATGTAACAAGGCCACAGCTTACAAACCTGTTTTC
TTAATTCCTAGACTTGAGCTGATTTGGTAATAAATGGTGTCGCAAAATAA
GCTTTTATTGGGATCATTTTATACAACTTTGTCTTGTTCTTAACTCATCG
ATCTTATTAGGTTATCACTTAGCCTGAGTACCAGCCTGTTTATCTATTGT
CCGCTCCCCACAATCCGCTACCAGATCGTGAGGAGCGGACGAAAGCTAAA
AAAGGCTGGTACTCAGGCTAGTCATTACTAGAAGGATTTGACCTCAAAAG
TTTTCAATCAAACCTTACTGTAGCTTTTCTAAGGCTATAACAAACCTCGC
TCATGCCTGTGTAAAACCCTGGGACCTATGTGCCCATGACACAAGACATA
TCTACAGCCCTTTTTCCAATGAAACATTATCCCACACT Coding sequence (CDS) from alignment at Sc0000042:337534..343771+ >Blg00516.8 ID=Blg00516.8|Name=Blg00516.8|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000042:337534..343771+ (Branchiostoma lanceolatum) ATGGCAGAAGGTGAGGGTGAGGCCGGGGTGAGCGCCATGCCCCTCCCTCC CATGCAGTTCGTCAGCCAGTACACGACGGAGAACGTTTCCCGCGGCCTGG CGCCCCCGCCGCCTCCACCAATCACAGACCAGTACTCCATGTTCGGCAGC GACTACCAGGTGGACGACCAGATCATCCGACCGCTGGAGTCACAGGGAAT CCGTCGTCTCCACCCCGACAAGTTTGACCACAAGCTGGAGCTGAAGAAGC TGAACCACTCCATCCTGGTCAACTTCCTGGACCTGCTGGACATCCTCATC AAGTCACCAAACACCCCGCGCAGGGAGGAAAAGATCGATGACCTGAACCT GCTGTTCATCCACATGCACCACCTCATCAACGAGTACCGGCCGCACCAGG CGCGGGAAACTCTCCGGGTCATGATGGAAGTGCAGAAACGACAGAGGCTG GAGACGGCTGACAGGTTTCAGCAGCACCTGGACCGCGTCATCGACATGCT GAAGCAGTGCGTGCAGTCCATGCCTGAGGACATAGGGGGCGCCTCTGACA GCGAGGACATCAAGCCGGACCTGGAGGAGCTGAACAGACAGGCGGGGATC TCGCAGAGCAAACGTGACGAGGACTATGGGAAAGACAGACTAATGTGCAG CATAGTGGACAACATCAAGTCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00516.8-exon-Sc0000042-1570713199:337534..338177 | Blg00516.8-exon-Sc0000042-1570713199:337534..338177 | Branchiostoma lanceolatum | exon |
Blg00516.8-exon-Sc0000042-1570713199:338645..338850 | Blg00516.8-exon-Sc0000042-1570713199:338645..338850 | Branchiostoma lanceolatum | exon |
Blg00516.8-exon-Sc0000042-1570713199:339162..339289 | Blg00516.8-exon-Sc0000042-1570713199:339162..339289 | Branchiostoma lanceolatum | exon |
Blg00516.8-exon-Sc0000042-1570713199:339779..339919 | Blg00516.8-exon-Sc0000042-1570713199:339779..339919 | Branchiostoma lanceolatum | exon |
Blg00516.8-exon-Sc0000042-1570713199:340747..340945 | Blg00516.8-exon-Sc0000042-1570713199:340747..340945 | Branchiostoma lanceolatum | exon |
Blg00516.8-exon-Sc0000042-1570713199:342405..343771 | Blg00516.8-exon-Sc0000042-1570713199:342405..343771 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000042 | genome | Sc0000042:337534..343771 + |
Properties
Property Name | Value |
GeneID | Blg00516 |
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