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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:176454..184300- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00479.6 ID=Blg00479.6|Name=Blg00479.6|organism=Branchiostoma lanceolatum|type=mRNA|length=7847bp|location=Sequence derived from alignment at Sc0000042:176454..184300- (Branchiostoma lanceolatum) ATGTGTGTAGGCCAGGTGAGTGGGTAACCTACGAGTGGACACTCAAGGGG
TTTGGGGATGCTAGGATGATCATCTCTTTTATTTCGCCTTTCCCTCCACA
AAGCTGAGGTCAAACACAGTCTAACCCTCGTCTACGCATTGTAACGTTAC
ATATCAACAAAAACATCTCGTCATGGTGAGATGAAGATTTTCCCAAATCA
AGAAACTTCGAAAACTGCCTGAGAGCCTCGACTTTCCCAGAATTCGTCTC
CGGAGACACCTGTACAGAATAGTAGTCTCCACTTGCCGTGAGTGTCTCCA
TTCTTCAGGCCGACCTCATGGCTCTCCTACCGCACGTCTCCGCGCTGGTG
CTCGGCGTCCTGGCCACCCATGGCCCGAGGAGCGCTCAAGCACGCTTCGG
TGACAAGGTGGCTCTCGTACCGCGCGTCTCCGTGCTGGTGCTCGGCGTCC
TGGCCGCCCTGGGCCCGAGGAGCGCTGACGCACGCTTCGGTGACAAGGTG
ACGGACGTGGTGGACGACGACAGGTTCGAAGTGATGGGCCAGGCGTACGT
GGAGACGTTTACGGTGACTAACGACGTGGTGGAGCTTGAAGTCGTCGTGG
AGGTAACGTTATGCATTTCAGCTAGCCTGGATGCCAGACCCCCAACCTCT
AACATATCTATCGTTGCCCAAACGATAGATATGTTAGAGATTGGGGGTCT
GCCATCCAGGCTACATTTCAGCCGAAGTCATTTTAAAGAGATTAGATGCG
ATCGTAGCCAATCGTTTTCCATGTGACTAATTAGCTGATGTGCGTACCTA
CGGCTAAAGCCCTAATCTTATCCTATCTAGCCAGACCCTCGGCATTCTAA
ATTTGATATGTGTTACCCTTGACTTTATAATGGGAATTTTATACAAAACG
TGCGAGTATGACTAAAATATGATAACAAAACACACAAAGCGTAAGAATAT
TCGTTTGTTATCGATAAATTCGTTGAGCGCGGCGTTGTGGAACTGGAAGT
CGTGGTGGAGGTATGGCATTTCAGCCGACGTCATTTTAAAGAGATTAGAT
GCGATCGTAGCCAATCGTTTTCCATGTGACTTATTCAACTGGTGGACCGA
CTAAGTAGCTTATGCCAGCACAGGAAAGAACAAAAGATGGTCATGCCTTC
AAGTAGTAGAGCTATGTACCCAGCATTGATGTGTTCAAAACTTGCTATTT
TGCTAAAAGTATCCCGAGAATGTACAAATGTACAGTAGGGGCATCCTGAC
TAGATAGCTTTGAACGAACGTGGCTGTTACGTGTGAGCAAAAGACAATCA
AATATGAGGTTCGGTTCAAACCCAGTGACAGTGAGCCTGTGTTGGACTCG
GTAACCTGGTGGTGGGCACGCATATGGGATATATGCAAAACTGTCTTTAA
GCATTTTTGATTATACCCCGCCTCAAACCTCTACTGCTATGCAGGACGCG
GTAGCAGAAATAGACTGAACATTTACCAGGGAAAAGCGATTTTACAACGA
CTTTGATTCAAGAATATGTTGATTCCAAACTATCCAAACTTCTGCTTCTG
TATAGGAGACTGTTGATGTGTTTGAGTTCTGGCTGGTTCACGCTGTTTAA
CAACGACTCGAGGAAGATTCCTGTATTTCATTGTATTTGTCGTATACCTG
ATCTAATGCCTCTTTGCCGTTTCGATATGGTCCATTGCAATGTCTTGTCT
TTGTCAGCAGGGCTAGCCCTTTGAAATAGCCTCAGGCTAGTTGGGCAGCC
CTGGCTATGTGTCCTGAACAGTCAAACCAATAAATGAATAAATGTACGAG
CTACATGGACATTTAGTGGTTTTCGTCGATTTCGAGTCGCATGATGTTTT
CAATAACCTTTCTCACGCGGTGGACATGATAGAATGAAGACGAGGCCAAT
GAGGCAAAGAAGCAAAAATAATGTACAGATTTAGTTTGCCTCCTAAATCA
CATAAAGTTTTAAAATATGATATCCAAGTATTAGTATTACAACTAATGAA
ATGCACACAAAAAGATGCAGCGATTTAGAGCTTCGTTGACCGATCCCATA
GTCTCCGCCCTCCTCTGTCAAAACGTAGAAATGAAAATAAAAACATAGAA
ATGCAAATTTTTGACGGTCATGGAGCCACTTCCTCATAGGTCGATTCTCT
AATTATCAAGTAATCATTGGCTAAACTGCTAATTGTGATTAACAGTTAGG
ATCGGTCTAATGTTTGCCACAAGGGCCTCGTTTTCATTCTATCATGTCCG
CCGCGTGAAAAAGGTCTATGACGGTCCTCTATCACAAACTCCTCCTTCCG
CTCACGCCCTGCAGGACACGGTTGATGTTTACGAGTTCTGTTTCTGTGCA
GGACACGGTTGATGTTTACGAGTTCTGTTTCTGTGCAGGACACGGTTGAT
GTTTATGAGTTCTGTTTCTGTGCAGGACACGGTTGATGTTTACGAGTTCT
GGCTGGTGGACTTCCAGCCCTACGAGTTCAGCCCGAACGGCACGCTGTTC
AGCAGCGCCACCGGCGAGATGCAGCGGCAGTACACCTCCCCGTGCGCCAG
CTCATTCTGGAGACTCGACCTCTTCAGCCCGTCCTACGGATACCCCTTCC
CCTTCACAGACACCGGCAGCTTCGTGTAAGGAAGGCTAATTTTGTTCGTT
TCTTTGTTTCTTTGTTTGTTCGTGTGTTCGTTTCGTTGATGGCTTGTTTG
TTTGTTTGCCGCATACTGGTAAACCACCTCAAAGCGTAACACACTCGACT
CTTCAGTCCCTCCTACGGATACACCTTCCCCTATACCGACGTAGGCAGCT
TCGTGTAAAAAAGGCTGCTTGCTTGTTTGTGAACCACCTCATAGCGTAAC
ACACTGGACTCCTCAGCCCGTCTCACTGTTATCCATTCCCCTTCACAGAC
ATGTGCAGCTTCGTGTAAGATATATCATCTTTTGTTTGTTACGTTCATGA
AGGTTAGACATCCAGGTGAAGAATATTTAAAGACAATTCAATCTCTACAA
CTGGATGAAATGCGGAGATTACTTTCGGACATTTGTTTCTTTATTTGTTC
GTTCACTTGTTTGTTGTTGAATACTGGTAACGTTAAACCACATCGGTATT
ATAATCGGTTCGTCTAGCTCTCTAGGTTAAGTGGAAAATCATGGTACTGG
AAAGGTCATTGGGAATGCATGTTTATAATGATCTTTCAGCTGTAGGCCCA
GCAATGTTCTCACATTTACCTTGCTTACAACAGACTATTCTAAGTCAAGT
TTAACGGTTAAATGTAGTTCGATATCATATTAGAAATTGAACCTGTGCAG
AGTGGTATTGATTAGTCTTAAGATGTAGTTAGATGTCACCCTTTCGTTAT
CACTGTAACTATGCTTGCACTGTAACCGTGACCTGTGCTTAGCTCATCAG
AGCATAAACGTGCAATAAAGGTCTTTCATTCATTCATTCATTCATTCATT
CATTCAAATTTCCGTGCGCGTTGTAGGCCGACCAACGGCAGTGAGGAGGG
CGGCGTGCCTCCCAAGCTGCTGTACAACTACTACTTCAAGAGCGATCCCT
ACAACATCACCGACAACCGCGGCGAGAGGGTGGAGCGGACGACCAACAGG
ATGCTGTTTCAGGGTATTCCATCTTTGACTTGTAATTAGGGTGGAGGGTT
GTAGGGGGGTGGGGTGGCAGGATGGTTGCTAGTCCATTCCTGAAGGCATC
TACAGCCTGCATAGTATGGCCCGGTAGCTGATTCAATCGCGTTGCTATTT
CGTATATTGGACAGGAACGGTCACAAAGCAACATGGGTAAGGGAATGATG
CCAAACATCTCTGGTTGCCTTGTTTTTCCTTGCCTTGCTCCGCGGTTTCA
TCACCTATACGGTCAATTCGATTCTTTATTACAGACACACGAATGGTAGC
CTGAATGGCGTTGATATTTACAAATTGACAATTACAAAGACTTAACACAT
TTAAACATACATATACATATATACATCCCTAACATGACAGGCGCCCATCA
TTGCGTACCAGATTCATGGTACCTTGTGTCCCTGAGCTACAACACTTGTC
AACCACCTCCTATATTACTGACATGCTAACTGCACATGTTCACCGTGATC
TTTAGGTTCCTCCTACCGCCTGTTCAACTGCACGGATACCAGCGGCGGGA
CAGTATGGCGGTACACCAACCAGACGGAAACAGTCGAGTTCCGCTCAACC
GTCTACTTCACCAACATCCGCCCCATCGAAACCTCGGACCTCACAAAGGT
AAAGAATCATCTCGCATGCTTGATATCCATCATCATGTTTCATACTCTTG
ACAAGTTGGAGTGTACATGTACACAAATATGTTGGATATCCAATATGTTC
GATAACCAATCCGCTCATAGTATGGATATCCAACATATACTCATAGCATA
ACTCGTAGGGTCAGCTGTCACCATTGCATGGGTTCATGTAGGAGAAACAA
TAACTCTACTCCGTCAGCATCGCTAAATCCATGTTTTGCCAAAGATCGGA
GTCTGAAATGGATTCTGTGTTGAACTTCTTTTGCTACCAATTCTATATTG
GCTATGGGGATAGGCAGCAGGGAGAAGATTAGTGTAGTGGTGTCATTGGC
CAAACCTCTATTTTTGTATGTCCAATCGTAGCGATTGCTCTATTGTTCTT
ACCGCTATATCCACTCCATTGCCGTTGACCCCCAGGGCCACTCCTATGTC
CAGTCGCACGCCGAGCCGATCTACCGGATCTCCCCAATTACTCAACGTGG
TGGTCACTTGCAAAACGCTTTCTTATGTATGAAAAAAAAACACGTCCTTA
CCACAGACCATGTTGATAACACGTGTGTATGTTTCCTATGTCCAGTCGCA
CGCCGAGCTGATCAACCGGATCTCACGGATTGGCTCAACGTGGTTGGTCA
ATGGGGTGGTCACTGGTCAAATGTTTTCTTATGTATGAAAAAAAAATTAC
CATAGACGGTGTTGATAGTGTGTGTATGTTTCTGCCCCCTGTATGTTAAT
GTCCACTGTTTGTGACCGCCCAGGGCCACTCCTATGTCCAGTCGCACGCG
GAGCTGATCTACCGGATCTCCCGCATCGCCCTGGTGAACGTGGTGGTCAG
CAGCTCGGCGCTGGTCAAGCCGCTGCTCAACTACGTCATCATCTCCCCTG
GTTACGANATATCCCCTGGTTACGAGCCTGACGGCACGCCCGCCACCGAC
CTCGCCACGGTGGAGATACAGGTGCTATATTTAGCTTGAAAGTTCATCTG
TGTTTGTAGAAATCATTCTTAAACAAGTTTTAACTATAATTTCCAACACA
AGAATTGGACTCACACAAATTTTCGACTGTACAACACCAGTCTTTGTCAA
GGAGTGAGCAATCCACCGCTGGGCGCTAGACGCACTGCTTAACCCAGCTT
ACATCCCTGTTCGTTCCTTAGTTCACGACGTCCACGCAGTCGCCTTCGGG
AGAGCGGAACCACTACATCCACTCGGGAACGTCGCTGAACTACACCGCGG
ACTACGTCACCCTGCACGACCTGGACGCGGTCACCAGCTACCCCACCACC
ACCCCGCCCTGCGTCATCACTAACGGAGCCATCAAGTAAGATTTCTTTTC
TTCCAACAGTCATCTTTCGAAGCTGAGCTTGAACTAATCTCCAAGCAACT
GACAGCATGATAAATCGTAACGTTTTTTTAGTTGATGGCGTCGTGTTAGA
AAATTGGTTTACCATCCTGATATTTTGTAGTCCTACCTTACTTATCCAGA
CTTTTACTGAGAGAGAACTTTGGTATATTGGATTTTGATTGTGTCTCGAA
GCGGTGCAATGGCCGAGTGGGTAGAGTGTTCGTCTTGCACACGGTAGGTC
GTGAGTTTGAACCCCGGCCGGGTACATACTGCTTTCTCTGCTTAGCATTC
AGCATTTGGGAAAGAGTATGGAAGTTAAACACACATCACTACCAGCGGAC
TAGCCCCCTGCTGTAGAGACTTGCACAAAGTTGTGTGGCCCAAGGGCTGA
GAATCGGAGATGGGCGCCACCATATGTTCCACTAAGTGGCGCGGGAGGAC
TTTAACTTTAATTAACTAACTCGAAGCGGGCAGCTCTGATATGCGATGAA
CAGGTTGCCTTGATGACAATGTGAAACTCTATCCACAGCCTGTGTACTCA
GACGTGGACGTTTGTGGTTATCCTGAAGATCACCCCGCGGAATGTGGACG
ACGGTCTGCCGGTGGACGCGTCAGGTGACTGATATATTCCTACTTTAAGA
TTGGTGTACTGCGAAGGTATCTGTTTTCAGTGATCCTTTTGTGGAGATCA
TACATCAGATTTCAAGCCTGCTGCGTTTCATATGCATCCGATATCGACGT
TTCTCTTTGCCCTGGCATTTTACTATGCTACACTGCACTGCACTGTGTTT
GATTTGGCGTTCTGGATTCATACTAAGCAGTGGAAATCAGTTATATAGAA
ACTTTACTGCAGCACCGCATAGTCCTTGTTTAATCCTTTATTGCGAACAG
CGAATGCTTCTAATGACTTAGCTGCCAATCTTTGTGACCTATGTATAGAT
GTATCCACTAAGTATAAGATATAACGTTACATAAACTTGTTTTGTTGACA
CCGATCTCACCAGGAGTGTTTGCCTTTGGGCTCTTAATAAGTTTGATACT
AAAAGAACATCTGCGTATCTCGAGTGCAATCCATTGGGTGATCTAAATAC
GTTCTCACCAGGAGCCTTCGGATCATGAGCAAGAGAGGACCTGAGTTTAG
CAATGAAAGAACAACTATCAATGCTTCTTAAGACTCGGATGCAATCTAAA
TATTTTTTGCCCCCATCTGGCCAGGCGTGTTTACATTCCGGTTCATGACG
GAACAAAGTTGTAAAAGAACCCACTTTACTGCGAACAGTGAATGCTTCTA
ACGACTTAGCTGCCAATCTTTGTAACCTATGTGTATGTATCCGCTAAGTA
TAAGACATAGCGTTACATAAACCTGTTTTGTTGTCCCCGATCTGGCCAGG
CGTGTTCACGTTCCGGTTCGTGACGGAACAAAGTTGTAAAAGAACCCACT
TTACTGCGAACAGTGAATGCTTCTAACGACTTAGCTGCCAATCTTTGTGA
CCTATGTATATGTATCCGCTAAGTATAAGACATAGCGTTACATAAACCTG
TTTTGTTGTCCCCGATCTGGCCAGGCGTATTCACGTTCCGGTTCGTGACG
GAGCGGTGTAACGACACGACGGCTGACGAGTCCTCCGCGAACTGCACCAT
CGTGGACAACATCAACCCGTCCGTCATCTCCATGAACATCACCATTCAGG
TTAGAAGATTTCAGTTATCTGTTGTGAGTGTGGCGCCTGAATTCTGACAC
TCAAACATCCTAGATATCACCAGTAAAAGTATATACGTTAGGTAGTTCCA
AAGCCAAGTCGAGTTTTGTTAGTATCTGTGTGTTCCAGGACCTCTGGCCC
TCTAACGCCCTAGAAACAGCCCATAAATGTATGTACGTAAGGTAGACACA
AACCAAGGTGGATAGATGTAAACCATCGTGGACAACATCAACCCGTCCGT
CATATCCATGAACATTCAGGTACGCAGGACTTGTTACCTCCTTAGTATGC
GTCTGTGTGGTACCTGAATTCTAGCACTCATGACCAATAAAAGTATACAT
GACAAGGTGGATAGATGTAAACCATCGTGGACAACATCAACCCGTCTGTC
ACACGAATGGTGGTATAGTAATCAGAACTCAAATGATGTAATTTGTTTCT
GTTATATTTTGCCTGACCCCTGCCTCTTCCCTGATGACCTCAATGAAAAG
CTGCCTGTATGCCGATTTGAGCGTCTCATGAATAAACAAAGGTTCAA Coding sequence (CDS) from alignment at Sc0000042:176454..184300- >Blg00479.6 ID=Blg00479.6|Name=Blg00479.6|organism=Branchiostoma lanceolatum|type=CDS|length=1410bp|location=Sequence derived from alignment at Sc0000042:176454..184300- (Branchiostoma lanceolatum) ATGTGTGTAGGCCAGGCCGACCTCATGGCTCTCCTACCGCACGTCTCCGC GCTGGTGCTCGGCGTCCTGGCCACCCATGGCCCGAGGAGCGCTCAAGCAC GCTTCGGTGACAAGGTGGCTCTCGTACCGCGCGTCTCCGTGCTGGTGCTC GGCGTCCTGGCCGCCCTGGGCCCGAGGAGCGCTGACGCACGCTTCGGTGA CAAGGTGACGGACGTGGTGGACGACGACAGGTTCGAAGTGATGGGCCAGG CGTACGTGGAGACGTTTACGGTGACTAACGACGTGGTGGAGCTTGAAGTC GTCGTGGAGGACACGGTTGATGTTTACGAGTTCTGGCTGGTGGACTTCCA GCCCTACGAGTTCAGCCCGAACGGCACGCTGTTCAGCAGCGCCACCGGCG AGATGCAGCGGCAGTACACCTCCCCGTGCGCCAGCTCATTCTGGAGACTC GACCTCTTCAGCCCGTCCTACGGATACCCCTTCCCCTTCACAGACACCGG CAGCTTCGTGCCGACCAACGGCAGTGAGGAGGGCGGCGTGCCTCCCAAGC TGCTGTACAACTACTACTTCAAGAGCGATCCCTACAACATCACCGACAAC CGCGGCGAGAGGGTGGAGCGGACGACCAACAGGATGCTGTTTCAGGGTTC CTCCTACCGCCTGTTCAACTGCACGGATACCAGCGGCGGGACAGTATGGC GGTACACCAACCAGACGGAAACAGTCGAGTTCCGCTCAACCGTCTACTTC ACCAACATCCGCCCCATCGAAACCTCGGACCTCACAAAGGGCCACTCCTA TGTCCAGTCGCACGCGGAGCTGATCTACCGGATCTCCCGCATCGCCCTGG TGAACGTGGTGGTCAGCAGCTCGGCGCTGGTCAAGCCGCTGCTCAACTAC GTCATCATCTCCCCTGGTTACGANATATCCCCTGGTTACGAGCCTGACGG CACGCCCGCCACCGACCTCGCCACGGTGGAGATACAGTTCACGACGTCCA CGCAGTCGCCTTCGGGAGAGCGGAACCACTACATCCACTCGGGAACGTCG CTGAACTACACCGCGGACTACGTCACCCTGCACGACCTGGACGCGGTCAC CAGCTACCCCACCACCACCCCGCCCTGCGTCATCACTAACGGAGCCATCA ACCTGTGTACTCAGACGTGGACGTTTGTGGTTATCCTGAAGATCACCCCG CGGAATGTGGACGACGGTCTGCCGGTGGACGCGTCAGGCGTATTCACGTT CCGGTTCGTGACGGAGCGGTGTAACGACACGACGGCTGACGAGTCCTCCG CGAACTGCACCATCGTGGACAACATCAACCCGTCCGTCATCTCCATGAAC ATCACCATTCAGGTTAGAAGATTTCAGTTATCTGTTGTGAGTGTGGCGCC TGAATTCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00479.6-exon-Sc0000042-1570713199:184286..184300 | Blg00479.6-exon-Sc0000042-1570713199:184286..184300 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:183699..183992 | Blg00479.6-exon-Sc0000042-1570713199:183699..183992 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:181676..181875 | Blg00479.6-exon-Sc0000042-1570713199:181676..181875 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:180688..180824 | Blg00479.6-exon-Sc0000042-1570713199:180688..180824 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:180053..180195 | Blg00479.6-exon-Sc0000042-1570713199:180053..180195 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:179080..179277 | Blg00479.6-exon-Sc0000042-1570713199:179080..179277 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:178716..178879 | Blg00479.6-exon-Sc0000042-1570713199:178716..178879 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:178077..178162 | Blg00479.6-exon-Sc0000042-1570713199:178077..178162 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:176794..177126 | Blg00479.6-exon-Sc0000042-1570713199:176794..177126 | Branchiostoma lanceolatum | exon |
Blg00479.6-exon-Sc0000042-1570713199:176454..176644 | Blg00479.6-exon-Sc0000042-1570713199:176454..176644 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000042 | genome | Sc0000042:176454..184300 - |
Properties
Property Name | Value |
GeneID | Blg00479 |
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