Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00072702-protein ID=TCONS_00072702-protein|Name=TCONS_00072702-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1034bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00072702-protein vs. Swiss-Prot (Human)
Match: MATN2 (Matrilin-2 OS=Homo sapiens GN=MATN2 PE=1 SV=4) HSP 1 Score: 224.172 bits (570), Expect = 1.519e-60 Identity = 122/375 (32.53%), Postives = 192/375 (51.20%), Query Frame = 0 Query: 404 CRNMNGQCQHICIDDKNKVTCKCYAGFYLDTDGHSCIDINECSSL--PCQEVCDNTYGSYKCACKKGYRLADDGHSCTDFDECKHFGNLCEQDCVNTDGSYECVCFRGYVFHNDISACVDVDECVLDNGGCAEDCDNTIGSYRCTCNKLGYRMVPGKTYCEEINECELGTASCSQICTNTDGGYECSCRNGYRLDHDLHNCLDIDECLVGVPGCWGGCINTFGSYRCQCDTGFRGIMNDTKCQDINECQYKNGGCSNQCINTHGSYYCKCPKGFVARDPHSYTCDDKDECK--DLPCDHSCSNTPGSFYCACNVGYKLVNRTK-CVDVNECQEKMDGCSYKCINTKGSFICQCPEGFITVGTQCIEALNGTGCKR 773 C + C+ +C++ C+CY+G+ L DG C+ ++ C+S C+ C N GSY C C +G+ L D +CT D C + C+ +CVNTD SY C C +G+ + D C ++ C L+ GC +C N SY C C++ GY + P C ++ C C Q+C NT+ + C C G+ ++ DL C +D CL+ GC C+N S+ CQC G + C ++ C + GC + C+++ S+ C+C +G++ R+ TC KD C+ D C+H C N+ S+ C C G++L K C + C+ GC + C+N S+IC+C EGF+ A +G CK+ Sbjct: 283 CAMEDHNCEQLCVNVPGSFVCQCYSGYALAEDGKRCVAVDYCASENHGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCRCHR-GYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVCQCSEGFLINEDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKLDSCALGDHGCEHSCVSSEDSFVCQCFEGYILRED-GKTCRRKDVCQAIDHGCEHICVNSDDSYTCECLEGFRLAEDGKRCRRKDVCKSTHHGCEHICVNNGNSYICKCSEGFVL-------AEDGRRCKK 648 HSP 2 Score: 222.246 bits (565), Expect = 6.601e-60 Identity = 146/428 (34.11%), Postives = 199/428 (46.50%), Query Frame = 0 Query: 404 CRNMNGQCQHICIDDKNKVTCKCYAGFYLDTDGHSC--IDINECSSLPCQEVCDNTYGSYKCACKKGYRLADDGHSCTDFDECKHFGNLCEQDCVNTDGSYECVCFRGYVFHNDISACVDVDECVLDNGGCAEDCDNTIGSYRCTCNKLGYRMVPGKTYCEEINECELGTASCSQICTNTDGGYECSCRNGYRLDHDLHNCLDIDECLVGVPGCWGGCINTFGSYRCQCDTGFRGIMNDTKCQDINECQYKNGGCSNQCINTHGSYYCKCPKGFVARDPHSYTCDDKDECK--DLPCDHSCSNTPGSFYCACNVGYKLVNRTK-CVDVNECQEKMDGCSYKCINTKGSFICQCPEGFITVGTQCIEALNGTGCKRLKVNMSHILTSQWTNVTDGWSWQVGISVDFLNVVNIPR-YRCIGVLVDEKFVL 825 C + C H CI+ C+C G+ L++D +C D+ C+++C N GS+ C C GY LA+DG C D C + CE +CVN DGSY C C G+ + D C +D C N GC +C NT SY C C K G+ + P K C IN C L C C N + Y C C GY LD + C +D C GC C+NT S+ CQC GF + C ++ C + GC C+N S+ C+CP+G V R TC D C D C+HSC ++ SF C C GY L K C + CQ GC + C+N+ S+ C+C EGF A +G C+R V S + V +G S+ S F+ + R +C +D FV+ Sbjct: 242 CSTLEHNCAHFCINIPGSYVCRCKQGYILNSDQTTCRIQDLCAMEDHNCEQLCVNVPGSFVCQCYSGYALAEDGKRCVAVDYCASENHGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLK-GFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCRCHRGYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVCQCSEGFLINEDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSD-GKTCAKLDSCALGDHGCEHSCVSSEDSFVCQCFEGYILREDGKTCRRKDVCQAIDHGCEHICVNSDDSYTCECLEGFRL-------AEDGKRCRRKDVCKSTHHGCEHICVNNGNSYICKCSEGFVLAEDGRRCKKCTEGPIDLVFVI 660 HSP 3 Score: 174.096 bits (440), Expect = 2.141e-44 Identity = 108/308 (35.06%), Postives = 147/308 (47.73%), Query Frame = 0 Query: 475 GHSCTDFDE-CKHFGNLCEQDCVNTDGSYECVCFRGYVFHNDISACVDVDECVLDNGGCAEDCDNTIGSYRCTCNKLGYRMVPGKTYCEEINECELGTASCSQICTNTDGGYECSCRNGYRLDHDLHNCLDIDECLVGVPGCWGGCINTFGSYRCQCDTGFRGIMNDTKCQDINECQYKNGGCSNQCINTHGSYYCKCPKGFVARDPHSYTCDDKDEC--KDLPCDHSCSNTPGSFYCACNVGYKLVNRTK-CVDVNECQEKMDGCSYKCINTKGSFICQCPEGFI--TVGTQCIE----ALNGTGCK 772 H C+ + C HF C+N GSY C C +GY+ ++D + C D C +++ C + C N GS+ C C GY + C ++ C C C N DG Y C C G+ L+ D C ID C GC C+NT SY C C GF + C+ IN C GC ++C+N SYYC+C +G+ DP+ TC D C +D C+ C NT SF C C+ G+ + K C V+ C GC Y C+N SF CQCPEG + + G C + AL GC+ Sbjct: 239 AHMCSTLEHNCAHF-------CINIPGSYVCRCKQGYILNSDQTTCRIQDLCAMEDHNCEQLCVNVPGSFVCQCYS-GYALAEDGKRCVAVDYCASENHGCEHECVNADGSYLCQCHEGFALNPDKKTCTKIDYCASSNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCRCHRGYTL-DPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVCQCSEGFLINEDLKTCSRVDYCLLSDHGCEYSCVNMDRSFACQCPEGHVLRSDGKTCAKLDSCALGDHGCE 537 HSP 4 Score: 83.5741 bits (205), Expect = 3.232e-16 Identity = 54/163 (33.13%), Postives = 78/163 (47.85%), Query Frame = 0 Query: 371 EFTCENKQCIDASLRCN---GHKDCHDGSDEICSGQCRNMNGQCQHICIDDKNKVTCKCYAGFYLDTDGHSCIDINECSSLP--CQEVCDNTYGSYKCACKKGYRLADDGHSCTDFDECKHFGNLCEQDCVNTDGSYECVCFRGYVFHNDISACVDVDECVLD 528 E++C N +D S C GH DG C + C+H C+ ++ C+C+ G+ L DG +C + C ++ C+ +C N+ SY C C +G+RLA+DG C D CK + CE CVN SY C C G+V D C E +D Sbjct: 496 EYSCVN---MDRSFACQCPEGHVLRSDGKTCAKLDSCALGDHGCEHSCVSSEDSFVCQCFEGYILREDGKTCRRKDVCQAIDHGCEHICVNSDDSYTCECLEGFRLAEDGKRCRRKDVCKSTHHGCEHICVNNGNSYICKCSEGFVLAEDGRRCKKCTEGPID 655 The following BLAST results are available for this feature:
BLAST of TCONS_00072702-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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