Blg00462.1 (mRNA) - B. lanceolatum

Overview
NameBlg00462.1
Unique NameBlg00462.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0003367:32..1817-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00462.1 ID=Blg00462.1|Name=Blg00462.1|organism=Branchiostoma lanceolatum|type=mRNA|length=1786bp|location=Sequence derived from alignment at xfSc0003367:32..1817- (Branchiostoma lanceolatum)
GCTTTTCCCATCTTCAATGATCTTGCTTTTTCAGGCCTGGGCATGAGATG
TGGAGTCTGCAGAGGATGTGATCCATAAAATTCACTTGCTACATGTATGT
TCTTAAAGTACAGTAGTTGGAATGTGATGATTTGTGACCCTCTCCCCCAG
ATGACAAGCGGCCCGTGGACCAGACCAACATCCCGTCTCACCTGGAGCAG
ATGTTAGAGATCCTGATCCAGGAGGAGGAGGAGCGTGGGGAGGCAGGGCC
GTGCATGGAGTATCTCATGCAGCATAAACTCCTGGAGACCTTACACACTC
TGGGCAGGGCAGATGTGAGTATCTCAGGAATTCACACCTTTTGAAATTGT
CTCTGTTCCTCTTCTTTTACAAGTCTCAGTAGCCAATCTTGCTTTAAACA
AGGTTAACCTTCTTGCTTTAATTAAAGAAGGGGAATGCTGTAAAATCCTT
CCATTGACTGTAACTTGAAATGATCACATGGTAATAGTATGCTGTTAGTT
TGATATTCAGAATTTTTTAAAGCTTTTTTCATACCTGTCTTTTGCTAATT
GTTTGTGACTCTGAAGCAGGTACTATAAATCCAGTGTTTCTCTTACACAG
TGCCCACCTGGAATGAAGCAGGAGGTTTTGGTGTTCTTCACAAAACTTCT
GGGGAAAATCCAGCAGCCGATCCTGCCGCATGTCAATGTGCACAGACCAG
TCCACGTGAGCTCTAACTTACAAATGTACTGGGTTACAGGGGAGGGGACA
GTGAATGTGTTCATTGTCGTATATAGATACAGTACTTCTGATTACAGGTC
TCAAAATATCCCTGGGACGTAAAACTTGAGTTGGGGAAAGGATGATTTCA
CTGCTATGTAGTCATAAAAGTAAAAAGCATGTATGATAATACAAAAGAGC
TAAACGGTGTAATGTTACTAAAATGTGTGTTTTTCAATTTTGTTTCCCTC
CATCCAGAGGCTGATCCGTGTGTGTGGTGAAGTGCAGGCGGCTCCAACAG
AAAATGAGGAAATCCAGTTTTTATGCACATTGTGTGCCAAGCTGAAGGAC
AACCCGTACCTAGTCAACTTCTTCCTACAGGTGTGATTTCTTCTTTTACA
CCATGACTATTTTATGTCATGAATTCATTCTAGCTGGACTAGGTAATATT
AAGTTAACTGATCTTTTGCATTGATGCATATGACTTGAAGGTTTGGGTAA
ACTCCATGAAAAATGGAGGCATTGTTTTTTTATTACTGTTATCTGTACAT
CTATGTCCAAGTTAACTATCAGTATCAGTTTTCTGAACTCCCAGGACTTG
ATAAAACCTTGAAGTTTTTGACACACATAGAAAGCTAAAAGTTCATTTGG
TCAGTTGCATTGTACAGTTAACCATGTTTATATTTGGTTGTTTTTCTGGC
CAAAAGTTCAATCCCAGAAAAATGTGGTTTCAAGTTTGTGTTTACTCAGT
TATTGAACAGTACAAGCATAGAGATGTTATGAGTGAAGCCTTTGATCAAT
TTCTTCTTGTTTTCAGTTTGAATAATTTTTTTTCAATCTTGATGTGTTTG
GTTTTCTTGTCCATATCCAATCCTTACCATCTGTTTATTTTCCTGTTCTA
TCTCCCTCCTGTTCTTCTCTCCTTCCTTCCTTTTTACCAGAGAGACTGGT
GGGCTCGTACCAGATCTGTAAGTCAAGGGTCAGAGGTCATGACATTTGTA
GCCTTGTTCTAGCTTGCTAAGACAGTCGAACCGCAGGTCATCGTAGAACG
CTTTATTTTCTTTTTTACGGCGTCGGGCGGGTCCCG

Coding sequence (CDS) from alignment at xfSc0003367:32..1817-

>Blg00462.1 ID=Blg00462.1|Name=Blg00462.1|organism=Branchiostoma lanceolatum|type=CDS|length=348bp|location=Sequence derived from alignment at xfSc0003367:32..1817- (Branchiostoma lanceolatum)
ATGTTAGAGATCCTGATCCAGGAGGAGGAGGAGCGTGGGGAGGCAGGGCC
GTGCATGGAGTATCTCATGCAGCATAAACTCCTGGAGACCTTACACACTC
TGGGCAGGGCAGATTGCCCACCTGGAATGAAGCAGGAGGTTTTGGTGTTC
TTCACAAAACTTCTGGGGAAAATCCAGCAGCCGATCCTGCCGCATGTCAA
TGTGCACAGACCAGTCCACAGGCTGATCCGTGTGTGTGGTGAAGTGCAGG
CGGCTCCAACAGAAAATGAGGAAATCCAGTTTTTATGCACATTGTGTGCC
AAGCTGAAGGACAACCCGTACCTAGTCAACTTCTTCCTACAGGTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00462.1Blg00462.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00462.1-exon-xfSc0003367-1570713199:1504..1817Blg00462.1-exon-xfSc0003367-1570713199:1504..1817Branchiostoma lanceolatumexon
Blg00462.1-exon-xfSc0003367-1570713199:1113..1217Blg00462.1-exon-xfSc0003367-1570713199:1113..1217Branchiostoma lanceolatumexon
Blg00462.1-exon-xfSc0003367-1570713199:32..860Blg00462.1-exon-xfSc0003367-1570713199:32..860Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0003367genomexfSc0003367:32..1817 -
Properties
Property NameValue
GeneIDBlg00462