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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:413769..419161- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00196.3 ID=Blg00196.3|Name=Blg00196.3|organism=Branchiostoma lanceolatum|type=mRNA|length=5393bp|location=Sequence derived from alignment at Sc0000026:413769..419161- (Branchiostoma lanceolatum) ATGCACCGGAAAAACTATGTCTTCCCGCTGGTGGCCGTTGTTCTTCTCGC
GGCTGTGCACCTCTGCTGGGCCGCCAGCTGTGTGAAGACAGGTCCGTGCT
CCTGTCAGATGGACGACGGCTCAGGGGTCATTGACCTCAGGCCTCTTGTC
AACGGGAGCCCGACGTACGTATAGTCACTTTACGCCGAAAATTCTTTGTA
TCGCATAATCGCTTTGTACATATCTGGTTTGTACGTTAAGTACAAGCTGT
TTAGGACCAGAATGATAGTTTTGAACCACTCACGATTTTATCGACGTATT
TGGTGCCTGACGTCCAACAGGACGTCCCTAGCCGTCCGGATATACTCATC
ACGACTTGAGTGGAGTGAGGAAATGCGTGTTAAGTGCCTTTCCCAATGGC
ACAGCATCTGGACCTCCTAGGAGTTTAAACACAGGACATGTAGATTCTGA
GTTAACTAACGAAAACGCAAGGTAACACGATTCCACCCAAAACAATTTGC
CCGCTCCATACCGACCGTGTCTGTGTTTGCGCTCCTTTTCCCTCTCCAGG
TTCAAGGACATAAAAAGCTCCTATTTTCCTGACATCTGGGTCTACTCCTA
CAACCCATGTGTACCGTTCTCCGAAGGCTCCTGCAAAAATGTATCTGTAA
GTCTCCGCTTGCTAAATGTGGTGCTTTTATGCAATTTGTCAACCACGTCG
CTGGACTTTTGGAAATGTGTTCTAATGTTGTTAGTTACAAGAATATTCAT
CAATCAGTGACTTATAAAGGTAACGAGATACGCACCTCCAAATTTTTGAT
GTCTACTGTACATCTTGATCACGGAGTGACCTAGTCTCGCGAGAACACGA
GACTAGGACGAGACTTGTGAAGATCGCCCAGTCCACATCCAGTTGGAACG
TGCTGGGATGAACCGTACCGAAGGTTGGGAGCTGCCCAAGTCCTACTTAC
CCCTGCTCCGCAAGGAGGAAGGACGAGCAAGGAGGCAGGACGATCTTCAC
AAGTCTCATCCTTAAGTCTCGTGTTCTCGCGAGACTAGGTCACTCCGTGA
TCAAGATGTACAGTAGACATCGAAAATTTGGAGGTGCGTATCTCGTTACC
TTTTATAAGTCACTGATTGATGAATATTCTTGTAACTGTTATTATACGTG
ACTGATAAATCTCTTCAACGATAATGTTGTTAGGTTTGTGCCAAGGACAG
ACTAAACCAGCGGAAGTACGAGAGTTACGGCACGCAGGAGTCCGCGGTGT
TCAGGTCTGACACGGGTGTAGGGCTCGTCCTGGGGTACGTGGACTCGCCC
TCGCTCAGGTCAGTCAACGTTTTGTCAGTTTATGAAACAATCAGTTTATG
AACGTATAAATATTACTTTGTTGCCTTTTTTTTCAGTTTGAATTAGTGCT
GCGTATCCAAACGTAACATCAGCTGGTACAGGTACAGGTACCGGTACAGA
GGTTTAGGTACAGGTCCGGACAATTTGAAAAATTAACATGTGTTTCTCTG
AACCTCTTCAACAATGACAGAAACATAAATAAACTGCTTTCAACTTGTCA
GTATCTTTATTCAAAGAACATAACTAGCTAGGTTTCCTACTACCAAACTC
CCTTCATAACTCCCTGCCTGCCTGAACGATCTGTTGCATATTAGTCACCC
TGTTTCAAGGTGTCAATTTGGTCACGTTTGGTGTTGCATGAGGCCATGAG
GTCAGGAGATCGGTCACAAAATACGCACATACTTGGTGTAAATTTATATC
GGAACAGTACCGGTACTTCATGATCCGGTATTTTGGACCTGTACCTAATC
AATTTTTACGTTACAGTACCGGTACGCAGCACTAGTTTGTACTCTCATCA
AAGCGAGACCTCCCCTCACCCGAGAGGGCGTCCCTTACCGACTCTAGGTA
CTCAGTCGGAAGTTTATTTGATTATTTACCATTATCATTATCTATTTATC
TATTTATTTGAGCTTCGTTACAAAAAGTAACTGGATTTGGGTGACAGAAC
CAGATCAGTCCTGTCCAATAGATTGTGAAGGATCGTCATAACACTAACAT
CAACCTGTGAGAACACGATCATCTTGTCAACAGTTCAAATTTTGGCACAA
CACTGGACAACACAAAGCACAACGCAATCGTACTGTATACCACACGTTCT
TGCTAGCTAGAGTGTTAAGAAATATTCTAACGTGTAATGTTACTGTTCTG
TTCTGTCCATTGCAGTACGTGCTACTCGTGACTTGTCCACACATAACGTA
TATGAAAACTGTTTACTACAGGGTAGTACGTGCTACTGGTGACTTTTCCA
CACATAACGTGAATGAAAACTGTTGACTACAGGGTAGTACGTGCTACTGG
TGACTTTTCCACACATAACGTGAATGAAAATTGGTGACTACAGGGTAGTA
CGTGCTACTGGTGACTTTTCCACACATAACGTGAATGAAAATTGGTGACT
ACAGGGTAGTACGTGCTACTGGTGACTTTTCCACACATAACGTGAATGAA
AACTGTTGACTACAGGGTAGTACGTGCTACTGGTGACTTTTCCACACATA
ACGTGAATGGAAACTGTTGACTACAGGGTAGGCGCTGTAGAACTGTGGTG
CGTGGAGAAGAACCAGCCACAAAACCTCACTGTTGTCGGACGACATCCCG
AGTGGCCAAACACCATTGTAAGTGAATAGCTCTTTATTCACAACCGCATA
TTTACATGTGCCAACATTTATCAGCCCTCCTCTATCAGCGCTGAAACCCG
CTCGGGAAATGTTCGGCAACCCCTCCCGGTCTCAGCCCTGATCTTTTGAA
CGGAGATTTTGGTTTCTGGGGGCGTCACTGACAGTTGTTCATAAATAATT
AATGAGCTAGCCTTAATTGGTACAAACAGTCGTTAGTTGCTCATGAATAA
TTAAGTAGCCATGTAAGACGTTAGCTGATTGGCTGATAGCTTCCCAGCGT
CCTTTGCGGCTTTGCTCGAGATGAGCTTTAGCAAACCCTCTGATTGGCTG
AAAGCTGTTTAGTGGTGACGTCGCCAGAAGCGTGTTCAGGGGCTCGGAAG
TGCAGGGCCGCTATGGAGGTAACGAACATATCGGGTCTGCTGGGAGGATG
ACATTTCGATGACCGTCGTTCATCTCCATCAGGGCAATACTGACTGATTT
CACAGTGCACTGAAGCTAGGTGTTACTCAGCTAACAATGCAGTCCAAAAC
GTAAAGTATTGTTACGATTGATATTGTTAAAGACCCACTATGTAGTTTTA
GGCCAATACAGAAAGTAGATTTTCCTACTGTTTCTTTGCATAGCAAGCTT
TATCAACTCTATCGAATTGCTTACCGATATTCAGGAAGGGAGGTTACAAC
ATTACTGCACCATACAAACAACTTTAAAAAACTGTTATCCTCCATCCAAA
ACATCACACAGTGTGAGACTAACACATGGCCACACATGGCTTCTGTACTT
CTTATCAGGCTGATCGCCCAGTGAGGTGCCTGTTTACAGTTCACCAGTTT
CTGTAAAAATCATCCTTACCAGAGTTCTTGCAGTTTTGAAGGGAAAATAA
CCACACTTTATTGATACCCTTCAAAGTAGACTCTCTAGAATAAATTAATA
CTTGTATTCTACCCTCTTGGAGAAAGATATGAGTGTTTCCAAAGAAGAAG
AGCTTCATGACATCTGGCAGTCTAAAGTGTGCCTAAGTGATTAGACCACC
ATTGGGGTCCTCCAGTGCACTGGGATGATGTTGTTTATCTACTATTGAGG
TGGTGTCCGGGAGTTTTTGTTTTGTTTTTGTACAGTTCACAAACACCAAA
AATAGATGAAATAATGAAGAAAATATGCTGAAAAGGGGTTGTACATGTCA
GTACCTGCCATTAATATTAAGATTTGTTAACAAGAATATTTTCAATTTTT
GCGCCAAAATCCTACATATAGTGGGCCTTTAAGCAACAATGGTGGCTCAT
GTGAATAAAGAACTTTGCTATTCAGTCATTCACCAACCTGATGAAATTAT
TCACGAAACCATTGTAAGTGTTCCATCATTACCTAGAATATATATAGTTT
TTGTCACTGAATGATCGTCTTGAGACTTTGCATGCTGAAAACTGAGTCGG
TCGAACCGAGAAACGGACTTTGCAAAGAATACTTACCCTCTGGTGATTAC
TGAAAATCTTTGCCACGTTCAATGAATTCACAGACACGTGTGATTGTGAA
GTTGTATGAATCATTTGTAGTTGTACGTCTCTAACATATAGAGGAATAGC
AGACAAACACTTTCTTTTTATCAGGAAACTTAGATTTTGAAAATGATCCT
GTAGCAGTAGAATGTCCACTGCTAGCTGAGGAAAAATCTACACTACTGAC
AGGATGATGATTTTGCACTGCTGACAGGATCCTGTCATTAGTCACTTCTA
TGTCAAAACATGTGCCCGGATCTAATCCAAATTCCAATCTAACTATTTAG
TCAGTATAAAGACACTAAATGATGACGTACAGCTGTGAATCATTACCATT
GATTTCACCCGATGATGTTTCCCTACAGATCATGGCCCTGTTCAGCCCCT
GCTGCTGCCCGGGAGCAGGCCCAAACTGCGCAGACTCAGCAACTTTGTGA
AACTCAGCAACTTTGTGAACAGGAGAGTCAGCATGAACACCCTGGATTTT
CTACCATGGCCTGATTTCTGATTTATTTTGCCAAATCATTCACATTTGAA
CACCCTGGATCTTCTACCATGGCCTGATTTCTGACTTATTTTGCCAAATC
ATTCACATTTGTTTTCTAGGGATCGGGCAAAAGCAATATCGCTTGCAATA
CATTACCACATGATTCTTGTTACAAATCAAGGGTGGCCCTCTTCTCTAAT
AGATACACATGAGAAGAAGATCAACAAAATAACAACTAGAGTTCCACGAA
CACATTATCTTCGCCAAATAATCCAGGCTTATTATGGATAGTGATTGATA
TCTATTTACATGCTTTAATATCACCCCCTGAAAATTTGATCATACACAAT
GCCGTTTGGAAGTTATGAGGGGGGAAGTCTAGATAGGGTTTAAATCATTT
GGTGGTACAGGACTAGTATACAATGTAAGTGGTCATAAAAAAATCTGAGT
ATATTGATATCATATGGGCCCCTAAAGGTTTGAAATTGCAGTGTCGTAAG
TTGAAAATGATGACGAAATGGTACAGTCAATATATATGAATAGACTAAAT
CGTTATTCTATATCATACACATTTTGAAAGACATTGATAGTAAATGTGAC
TTTTCCGTACCTACATGTAGCAGTGGTGCAGTTTTGGGGCAGTGTACTCT
CCAAGCAGAACAGTGTGTCCGGCTGGTTTTTGACGTGTTGTTAGGTGTTT
TTGTTAGGCTTTCTATTTTGTCCCCTTTTCGCTATGATATCGG Coding sequence (CDS) from alignment at Sc0000026:413769..419161- >Blg00196.3 ID=Blg00196.3|Name=Blg00196.3|organism=Branchiostoma lanceolatum|type=CDS|length=522bp|location=Sequence derived from alignment at Sc0000026:413769..419161- (Branchiostoma lanceolatum) ATGCACCGGAAAAACTATGTCTTCCCGCTGGTGGCCGTTGTTCTTCTCGC GGCTGTGCACCTCTGCTGGGCCGCCAGCTGTGTGAAGACAGGTCCGTGCT CCTGTCAGATGGACGACGGCTCAGGGGTCATTGACCTCAGGCCTCTTGTC AACGGGAGCCCGACGTTCAAGGACATAAAAAGCTCCTATTTTCCTGACAT CTGGGTCTACTCCTACAACCCATGTGTACCGTTCTCCGAAGGCTCCTGCA AAAATGTATCTGTTTGTGCCAAGGACAGACTAAACCAGCGGAAGTACGAG AGTTACGGCACGCAGGAGTCCGCGGTGTTCAGGTCTGACACGGGTGTAGG GCTCGTCCTGGGGTACGTGGACTCGCCCTCGCTCAGATCATGGCCCTGTT CAGCCCCTGCTGCTGCCCGGGAGCAGGCCCAAACTGCGCAGACTCAGCAA CTTTGTGAAACTCAGCAACTTTGTGAACAGGAGAGTCAGCATGAACACCC TGGATTTTCTACCATGGCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00196.3-exon-Sc0000026-1570713199:418998..419161 | Blg00196.3-exon-Sc0000026-1570713199:418998..419161 | Branchiostoma lanceolatum | exon |
Blg00196.3-exon-Sc0000026-1570713199:418516..418612 | Blg00196.3-exon-Sc0000026-1570713199:418516..418612 | Branchiostoma lanceolatum | exon |
Blg00196.3-exon-Sc0000026-1570713199:417854..417978 | Blg00196.3-exon-Sc0000026-1570713199:417854..417978 | Branchiostoma lanceolatum | exon |
Blg00196.3-exon-Sc0000026-1570713199:413769..414633 | Blg00196.3-exon-Sc0000026-1570713199:413769..414633 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000026 | genome | Sc0000026:413769..419161 - |
Properties
Property Name | Value |
GeneID | Blg00196 |
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