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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96910_cuf0 >transcript:BL96910_cuf0-protein ID=transcript:BL96910_cuf0-protein|Name=transcript:BL96910_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=140bp
MCPCRTGGSVSLVYEDPSGSAGLSTPDKIGLAVGVSVALAALAGLGALLM FCFKKKGPYRPPTAKPRRSIVSPIVDSFETNIYSASMDDAWSHRVGKRGP QLNRFRDPDAVYGRLSYSPPPSTASSTSTRESWLPEPYVN Run BLAST on NCBI mRNA from alignment at Sc0000023:1822748..1826621- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96910_cuf0 ID=transcript:BL96910_cuf0|Name=transcript:BL96910_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3874bp|location=Sequence derived from alignment at Sc0000023:1822748..1826621- (Branchiostoma lanceolatum) GATGGAGTTCAGCGGCGTTGACTTTGAGAACTTGACAAGTCAGCATTCTT
TCCCGGTGAATCAGCTTCTTCCGGCTCTACGAGAAACGCTGAGGAGTGTC
GGCATCTCCGAGCCCTGTGTGGCCTCAAGCAGGATACTACTAAGGAGAAA
GGTAGATCATTTTTCTGGCTCAAAGACTACATGCTGCATCAAAGGTTTTC
AACAGGAAACCTATATGATACGTTGTTAAAGTGGGAGATCAACAGTACAG
AAGATTTGATAAGAAGTCTGTCTCTCTCTCCAATGTCTACATCAGGTTTT
CTATAGATTTTATGCCATGTGTTCGAACGTTACTCTGTGTCCAACGGCAG
CATCTCGTTCTCTATATAGATTAAATAATTGGTGAATAAGAATATCAGTG
TGCTTTTCTGTGTGCTTTAAAGAGTTTAAAGGATCATTAGTCTGCAGTCA
TCAAATGATGACGTTTGAGGTCAGCTGTAGCACAAAAACACACACCTTTT
TATCTTTTCACTATAAACCTACGTCTGCAGGATCACATCAAATTTTCGAT
GTCGAAAGAACCAGACAGCGCGATCAACCTCACAACAGAAGTCGAGAAGT
TAGACTCAGCAGCAGTGCTGCAACTCAATCTTCATTCAGTAAGTGTTAAA
GAGGCCGCATACGATTAGCAACACTCGATTGTTACACCATATCAAAGGCT
TATGCTACCCTTTATAGCATTAGTAATTAGGATTTTAACGTTTATTCTAA
ACCTCTATTTTGAACCATGCATCGGTTTAATAGTTCTTGCCATACATTTT
TCCGTGTACAATTGTCGTGCAATAAAGTTCTTCTACATTTCACGACCTTT
GTATTATCTTAATCTCAGAACTGCACTCTTGTACCGATGCGTCTTTTTAA
GCACCTGACATTGGCATTGAGAATTAGAAAGTACATGTGACTCCCAAAGA
TGTAGGCTCTGACTTGAGAGTCAATTGGGTGACTTGGCTGTGTTGCAGGT
GTTCACTGGTGACGTCACCCGTTACGATGGGACCTTTGACAGCATCTGCC
CACCACTATCACCAGAAGAAATGTGTCCCTGTCGCACAGGAGGCAGCGTT
TCTCTCGTGGTGAGCCGAACTCTCCAAAGTGGGGGACCATAGATTTGATC
TTAAAGGGGCCCAAAGCAATATTAAGGCGTTGAAAGTCGTATTTTCGAAA
TCAATTTTCTAGTGATTTCTTCCCATAGTAAGTTTAAACATCGGAGGTTT
TAAACATCTAAAGTATAAAATAATGATGCAAATGTGCTAATATGGGAAAG
CAAATGTCACTTTCATACAGATTGCCCTATCCAGAATACTTCTAGGTTCA
TCCCCTGAAATCACTTAGGTCACCTTTAAACCACAGTGTATACACTTGGA
CCTATGATGTGTCTTGTACGTGCGTAAGTGCACAAAACGTCAAATCAGTC
GGTAGCCTTGCAGCAACTGGGCATTACGGTATGATTCCGCTGTCCATAAA
ACGTTCATAAGCAGTAGAAAGAGTAAGATATTGCTAATATCAATACCATC
ATAATGTTATGAATTTAGACGTCTGTTCCGGTTGCTATCATTGTAACATG
TGCTAATAGCAGCTAATAAATATTTCCTCGTAATGATAGGGAATTGGAGA
GATAAGTTGTCAGCGCAGCCTTCAGATTCAGTCTGCCAACTCATCATAAA
TACCAGTATTGTGCCCATGCCCTCTTTTCTAACTCGTATGACTCATTTCC
ATTATAGTACGAGGACCCATCAGGCAGTGCGGGACTGTCCACTCCTGACA
AAATCGGGTTGGCTGTTGGCGTCTCCGTAGCTCTAGCAGCCCTGGCAGGA
CTCGGGGCGCTTCTGATGTTTTGCTTCAAGAAGAAAGGACCGTACCGGCC
ACCGACAGCCAAACCGCGTAGGAGTATCGTCTCTCCCATCGTCGACTCGT
TCGAGACAAACATCTATAGCGTAAGTAGTTCCCTTTGTATTGGATGGATT
CGGTCAGACCTGATATCGTTATTTTTCCCTTTTGTATCATAAAAAAAAGT
TGCTATGTGAATTGTTCTTGATTGCTTCTGTCGAACATCCTAAAAAGTTT
TTTTGGAAATTTGCAAATTTTAACGTGAAATGACATCAAATGTTGCCTGT
GCTGATTGTTAGTTAGAAATGTATCATGGCTACACTGCACACATTGTGTA
GATATGTTTTCAATAGTAAGATACAGACATTTTCTTTCGGTTGCGTTTTT
TTATATGATGACTTTTGAACTATTTGGATTATACATTGCTATTGTAATTC
ATACCCTATATCTCTATAAATTCCCAAACTAGGCAACCAAATTCATGTAT
GAAATCTAATCTACCTAACGATACTTACGTCAAAAATGGTTTTTGAAGTC
TGGTTGAGAGAAGATTGGGGCGCCATGATGGAAAGGTCACTTTGTTTTTA
TTTGAGAACAGCATATTTCTTTACAACAAGTTTCATCAACTCAGATAAAC
TTCATTATCAATTCAGATCATGATAATGTTTATTAGTAATCATTGATACA
AAGACGAATTACAAAAGTAGAATAGCAGAAGTGTGAGCAGTTTGCGAACA
AAACAGAAACCCAAAAACTCTTACTGCAAGTCATGCCTAATCTCCAAGCA
GATCTCCACCAGGGCGAAATCATAATATCGGGGGCTGACTGAAGATTTTG
GCTGGCTGATATTACAATTCTACTCCCGTGGAGATCCGCTTGGAGATTAA
GTCATGCCGTTGGTTTGTTGCTACAGGCTTCCATGGATGACGCGTGGAGC
CACAGAGTGGGTAAGAGGGGACCTCAGCTGAACCGGTTCCGGGACCCTGA
TGCTGTGTACGGCCGGCTGTCGTACTCACCACCTCCCAGCACTGCCAGTT
CCACATCAACGAGGGAGAGCTGGCTTCCTGAACCCTATGTTAACTAGTCC
ATCTACGTCTTCTAACACTGCAGCAAAACTAATGTATGGGCGTGAGGGGA
TGTGCTTTTTATAAGTTTGTTAGAAGAGAAAACACGATTTCTGAAATTGC
TACTAATTCAATTAGTATCAGAAGCATTACAATCCTGCAATGTACGGGCA
AGTAATCGTGGCCGTATTTGCCAAAATGTGTGCAACCACAGCAAATAACA
TTTCAAGGAATTCAAAGCAAAAAAACGCATATATAATGAAACTATCTATT
TTTGGCAAAATTTCTGACATTTCATTCCTATTGAGTCGTTCTCTGTCTGT
GTATACTGTGTGCTGCGTGCATGGCTATGAGCTGGGAGACCTGAGCAGAT
ATAATATAGCTTTGCATAGTGCCTAAAGATGACCACGACGCATGTTAAGA
GTATTTAACAAAGGCAGGCCATGCAACAGTTTCTATATGTTATTGTAATG
TGTCACCAATATTCAAGCTTCGTACGGCGCATCTGAAGCTCGCGTCGAAA
TATCAAAACTAAACCTCCTATCACGTAGCGTTAAGGAAAGCTTATATACA
TACATGCAATTTAGATGACCTCTTGATATTATTTTGACAATAATCTGGCC
TTGCTCTAAAACCCACGTTAAATGCTAGATACATATAAACGCATCTATTG
TTGTTGGAATAAAAAGTTCAAACCGACTAGACGTGCTCATCTGACATTAT
TGGACCGTGATTTAAAACACATATCGACTAGCTAGCTTTAACAAATGATC
AATCCACGAATGGGAAAATGCGAACACTAGAAGGAAAGGGCAATACATAT
CTGTATCTAAAGTGATAGGAAACGAGTCGTTAAGTGTTAGTATTGTCGCC
GGTCTAGCAGACTAAAGCAGTCATCCCGGCATGGTGTGAAATTTTGACCT
GAAATATACAAACACATTGACTGA Coding sequence (CDS) from alignment at Sc0000023:1822748..1826621- >transcript:BL96910_cuf0 ID=transcript:BL96910_cuf0|Name=transcript:BL96910_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1269bp|location=Sequence derived from alignment at Sc0000023:1822748..1826621- (Branchiostoma lanceolatum) ATGTGTCCCTGTCGCACAGGAGGCAGCGTTTCTCTCGTGTACGAGGACCC ATCAGGCAGTGCGGGACTGTCCACTCCTGACAAAATCGGGTTGGCTGTTG GCGTCTCCGTAGCTCTAGCAGCCCTGGCAGGACTCGGGGCGCTTCTGATG TTTTGCTTCAAGAAGAAAGGACCGTACCGGCCACCGACAGCCAAACCGCG TAGGAGTATCGTCTCTCCCATCGTCGACTCGTTCGAGACAAACATCTATA GCGCTTCCATGGATGACGCGTGGAGCCACAGAGTGGGTAAGAGGGGACCT CAGCTGAACCGGTTCCGGGACCCTGATGCTGTGTACGGCCGGCTGTCGTA CTCACCACCTCCCAGCACTGCCAGTTCCACATCAACGAGGGAGAGCTGGC TTCCTGAACCCTATGTTAACTAGATGTGTCCCTGTCGCACAGGAGGCAGC GTTTCTCTCGTGTACGAGGACCCATCAGGCAGTGCGGGACTGTCCACTCC TGACAAAATCGGGTTGGCTGTTGGCGTCTCCGTAGCTCTAGCAGCCCTGG CAGGACTCGGGGCGCTTCTGATGTTTTGCTTCAAGAAGAAAGGACCGTAC CGGCCACCGACAGCCAAACCGCGTAGGAGTATCGTCTCTCCCATCGTCGA CTCGTTCGAGACAAACATCTATAGCGCTTCCATGGATGACGCGTGGAGCC ACAGAGTGGGTAAGAGGGGACCTCAGCTGAACCGGTTCCGGGACCCTGAT GCTGTGTACGGCCGGCTGTCGTACTCACCACCTCCCAGCACTGCCAGTTC CACATCAACGAGGGAGAGCTGGCTTCCTGAACCCTATGTTAACTAGATGT GTCCCTGTCGCACAGGAGGCAGCGTTTCTCTCGTGTACGAGGACCCATCA GGCAGTGCGGGACTGTCCACTCCTGACAAAATCGGGTTGGCTGTTGGCGT CTCCGTAGCTCTAGCAGCCCTGGCAGGACTCGGGGCGCTTCTGATGTTTT GCTTCAAGAAGAAAGGACCGTACCGGCCACCGACAGCCAAACCGCGTAGG AGTATCGTCTCTCCCATCGTCGACTCGTTCGAGACAAACATCTATAGCGC TTCCATGGATGACGCGTGGAGCCACAGAGTGGGTAAGAGGGGACCTCAGC TGAACCGGTTCCGGGACCCTGATGCTGTGTACGGCCGGCTGTCGTACTCA CCACCTCCCAGCACTGCCAGTTCCACATCAACGAGGGAGAGCTGGCTTCC TGAACCCTATGTTAACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000023 | genome | Sc0000023:1822748..1826621 - |
Properties
Property Name | Value |
Transcript id | BL96910_cuf0 |
Biotype | protein_coding |
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