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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073098 ID=TCONS_00073098|Name=TCONS_00073098|organism=Clytia hemisphaerica|type=transcript|length=820bp CGAGCATtaataaagaatttaaaatgaacAACATAAAATGAAGACCAATC TAATCACATTCTAAAATATTGGGGAAATGAGCAATATATGAGCCCATACA TACACATTGTTCCATGATTGTATCAATGTCTATGActtgtaaaatttttg attgcTCAACATGAGTGATTAAGTTCATTGCTAATTCATCAGGCCTTAAA CATGTGTTAAACTGTGTTAAACTTGTAGAAGGCAAAATATTATAGAAGTA ACCAAAAGCAACATAATATTCATCATCATCAGTATTAAAACAAGCAAATC TTTCAATATTAAAATACTGTTTTGTGGACAAGCATACAGTTGTGCTGTGG CGTTTGATTTCTCTGGTTGATCTTGTTGATCGAATAGTAAACCCATGACA CTTAATGGATGAAAACATTGATACAGATTCGATAACTGCAGAAGGATGAA GAGCGATGAATAGGTCAAGCTCTAGGGGTGAAGGAGTGAATTTTCTAAAT GATCCAAGACCAGTAATGTCAGGAGTTATAACAAATTTTGCCCCTTGGTA CACATTATGACaacttttgatgaatttttcttctttagagCCTCCTTGAA TTGTTTCTTCACACAAAACTGGCAAAAGATTGGCAGCAGAAACAGCACTG GCCAACTGAAAGCAAATGTTCTGAGTACCGTGAATAAGGCTCAGGATATA ACCATTTTTGTCTTCGTAgtaaaacaaactatatacatACAGTGGTCCAA GTTCTTTAACATTTTGTGGAAGGTGTAAAAGAGAGTGAATGTTCATGGTT TGATAACGTAGTGGGTAGAT Run BLAST on NCBI protein sequence of TCONS_00073098-protein >TCONS_00073098-protein ID=TCONS_00073098-protein|Name=TCONS_00073098-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
IYPLRYQTMNIHSLLHLPQNVKELGPLYVYSLFYYEDKNGYILSLIHGTQ NICFQLASAVSAANLLPVLCEETIQGGSKEEKFIKSCHNVYQGAKFVITP DITGLGSFRKFTPSPLELDLFIALHPSAVIESVSMFSSIKCHGFTIRSTR STREIKRHSTTVCLSTKQYFNIERFACFNTDDDEYYVAFGYFYNILPSTS LTQFNTCLRPDELAMNLITHVEQSKILQVIDIDTIMEQCVCMGSYIAHFP NILECD Run BLAST on NCBI transcript from alignment at scaffold_86:109140..109959 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073098 ID=TCONS_00073098|Name=TCONS_00073098|organism=Clytia hemisphaerica|type=transcript|length=820bp|location=Sequence derived from alignment at scaffold_86:109140..109959 (Clytia hemisphaerica) ATCTACCCACTACGTTATCAAACCATGAACATTCACTCTCTTTTACACCT
TCCACAAAATGTTAAAGAACTTGGACCACTGTatgtatatagtttgtttt
acTACGAAGACAAAAATGGTTATATCCTGAGCCTTATTCACGGTACTCAG
AACATTTGCTTTCAGTTGGCCAGTGCTGTTTCTGCTGCCAATCTTTTGCC
AGTTTTGTGTGAAGAAACAATTCAAGGAGGctctaaagaagaaaaattca
tcaaaagttGTCATAATGTGTACCAAGGGGCAAAATTTGTTATAACTCCT
GACATTACTGGTCTTGGATCATTTAGAAAATTCACTCCTTCACCCCTAGA
GCTTGACCTATTCATCGCTCTTCATCCTTCTGCAGTTATCGAATCTGTAT
CAATGTTTTCATCCATTAAGTGTCATGGGTTTACTATTCGATCAACAAGA
TCAACCAGAGAAATCAAACGCCACAGCACAACTGTATGCTTGTCCACAAA
ACAGTATTTTAATATTGAAAGATTTGCTTGTTTTAATACTGATGATGATG
AATATTATGTTGCTTTTGGTTACTTCTATAATATTTTGCCTTCTACAAGT
TTAACACAGTTTAACACATGTTTAAGGCCTGATGAATTAGCAATGAACTT
AATCACTCATGTTGAgcaatcaaaaattttacaagTCATAGACATTGATA
CAATCATGGAACAATGTGTATGTATGGGCTCATATATTGCTCATTTCCCC
AATATTTTAGAATGTGATTAGATTGGTCTTCATTTTATGTTgttcatttt
aaattctttattaATGCTCG Coding sequence (CDS) from alignment at scaffold_86:109140..109959 >TCONS_00073098 ID=TCONS_00073098|Name=TCONS_00073098|organism=Clytia hemisphaerica|type=CDS|length=771bp|location=Sequence derived from alignment at scaffold_86:109140..109959 (Clytia hemisphaerica) ATCTACCCACTACGTTATCAAACCATGAACATTCACTCTCTTTTACACCT TCCACAAAATGTTAAAGAACTTGGACCACTGTatgtatatagtttgtttt acTACGAAGACAAAAATGGTTATATCCTGAGCCTTATTCACGGTACTCAG AACATTTGCTTTCAGTTGGCCAGTGCTGTTTCTGCTGCCAATCTTTTGCC AGTTTTGTGTGAAGAAACAATTCAAGGAGGctctaaagaagaaaaattca tcaaaagttGTCATAATGTGTACCAAGGGGCAAAATTTGTTATAACTCCT GACATTACTGGTCTTGGATCATTTAGAAAATTCACTCCTTCACCCCTAGA GCTTGACCTATTCATCGCTCTTCATCCTTCTGCAGTTATCGAATCTGTAT CAATGTTTTCATCCATTAAGTGTCATGGGTTTACTATTCGATCAACAAGA TCAACCAGAGAAATCAAACGCCACAGCACAACTGTATGCTTGTCCACAAA ACAGTATTTTAATATTGAAAGATTTGCTTGTTTTAATACTGATGATGATG AATATTATGTTGCTTTTGGTTACTTCTATAATATTTTGCCTTCTACAAGT TTAACACAGTTTAACACATGTTTAAGGCCTGATGAATTAGCAATGAACTT AATCACTCATGTTGAgcaatcaaaaattttacaagTCATAGACATTGATA CAATCATGGAACAATGTGTATGTATGGGCTCATATATTGCTCATTTCCCC AATATTTTAGAATGTGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00073098-exon-scaffold_86-1491911889:109140..109959 | TCONS_00073098-exon-scaffold_86-1491911889:109140..109959 | Clytia hemisphaerica | exon |
TCONS_00073098-exon-scaffold_86-1510915933:109140..109959 | TCONS_00073098-exon-scaffold_86-1510915933:109140..109959 | Clytia hemisphaerica | exon |
TCONS_00073098-exon-scaffold_86-1575043694:109140..109959 | TCONS_00073098-exon-scaffold_86-1575043694:109140..109959 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_86 | supercontig | scaffold_86:109140..109959 . |
Blast
The following BLAST results are available for this feature:
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