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  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 28 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 28 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 28 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 28 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 28 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 33 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 33 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 33 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 33 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 33 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 39 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 39 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 39 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 39 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 99 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 107 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 108 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined variable: prot in include() (line 109 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 109 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).

TCONS_00001363 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001363
Unique NameTCONS_00001363
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1640

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001363 ID=TCONS_00001363|Name=TCONS_00001363|organism=Clytia hemisphaerica|type=transcript|length=1640bp
CgaatcttcaaaactactttactTGTAAACCGCGAGGGAGACAATTTAAA
ACGTGCATCATTCAACGAAAACGGCAACTAAGTTTTCAAGAGAAACTGTT
GTTAGAAGCTGAGCTGTTTAAACCAAGGTGAGCTATGCCTCGAAGAAGGA
CTGCTGTCTTTCCCGTAAACGGTCAAGGGACTCTAGTCTATACCGTTCGT
AAGAAGAGTCAATTCACCATCTACATAACACCTGACAAACAAAAGGTACC
AAAAAGCTTAGATTTCGATAGTGAATTCTCAGAGTTTGAAGAGGAGCAAA
GTTTTGATACGGAGAACTACATCTCGTTGACTGTTGGTGAGAATTTTGCA
CGTTTCAAACTGAAGATGCATAAAGATGGTGAAGAGAGAGTGTTGAAAGA
AGAATATGGGAAGAATATTGGAATTGAACCCAAAGAACTGGTCAGTTATT
GGTTCAGTTATGACCGCGATGCACTGACCTTGAAATACGGCAAAGGGCAC
GTTATGACTCAAACAACACTATTAGAGTTCCCTTTCTTGGAAGGCAAATC
GAAAGGCGAAGAAGAGCACATTCGAAAGAAGTACAATATTTTCTTCAATG
CAGaAGAGAAAAAATACGTGGTTGCCGAATCGGAGAAAATGGTGGAGGAC
GTGACAGGAGGACTGGTCAAAATCGAACAGACGTTACAATTCTATCCCAA
CCCTCTCGTGACTAATTTCTCACCTATCGTTAAAGATAGCTCGAAAGTCA
CTTTGTTCGATCTTGATCGAGATCAATTCATGTTTTCAAGTAGCCTACCA
CCTGCCTGTAAAGAACTCTACGATAATATCAAAGGTCTTCAACTGGAGTT
TCCAGAAGATCCTATTACGAAACTTTCAGACGCCATACGGTACAGCATCA
ACACACCTGGAATGACTTTAtatgaaaagttgaaagaaaaggaagaacAG
TTTGCTTACCTACGTGTAACACTTGGGCCTGACCGCCGTACCGCACCTGG
TATTCCCTATGTTCTAGAGATCTGGCCTTCAGGAAAAGGAAGCCCTATCC
ATAATCATGGAGGAGCATGTGCAATAATTAAAGTGCTATTTGGTAGAATC
ACTTGCAACATCTACAACAAGATCACACAGCCACCGGAACAAACAGAAAT
GCAACCTTTGACCAGATTTGATCTCAATGAAGAGCAAATGACCTGGATAG
GCCCCAACTGGTATCAAACGCATCGCTTACACAACAACACTGATGATTTC
TGCGCAACCATACAATGCTATCGATATGACTTCAATGATGCAATTCACTG
GCCCAATTTCGATTATGTGGGTTTTGTAGAAGACAAAGAAAAATACGAGT
TGGAAGAATTCTATCCAGATAGCGATTTCACGTTCGTTAATTTGAGACGA
ACTGTTCTTGACGAGtttcaaaaattcttagaaGGATGAGTTATGATTTT
AACTTTCCTGCAAAGATTGCAGTGCTTTcaagtaaataaatattttgtta
gCGTTTTTTTTTCACAGTAAACAGTAAACCATGTTACATTTTAAAACGTT
ATACTGTTGAACCCCCATGTAATTTGTATTTAATAAATTGAAAGACCTAT
GTGTGAATCGAAAAAAAACTTGATAATTTCacaattaaaa
Run BLAST on NCBI

transcript from alignment at sc0000010:600456..604106+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001363 ID=TCONS_00001363|Name=TCONS_00001363|organism=Clytia hemisphaerica|type=transcript|length=3651bp|location=Sequence derived from alignment at sc0000010:600456..604106+ (Clytia hemisphaerica)
CgaatcttcaaaactactttactTGTAAACCGCGAGGGAGACAATTTAAA ACGTGCATCATTCAACGAAAACGGCAACTAAGTTTTCAAGAGAAACTGTT GTTAGAAGCTGAGCTGTTTAAACCAAGGTGAGCTATGCCTCGAAGAAGGA CTGCTGTCTTTCCCGTAAACGGTCAAGGGACTCTAGTCTATACCGTTCGT AAGAAGAGTCAATTCACCATCTACATAACACCTGACAAACAAAAGGTACC AAAAAGCTTAGATTTCGATAGTGAATTCTCAGAGTTTGAAGAGGAGCAAA GTTTTGATACGGAGAACTACATCTCGTTGACTGTTGGTGAGAATTTTGCA CGTTTCAAACTGAAGATGCATAAAGATGGTGAAGAGAGAGTGTTGAAAGA AGAATATGGGAAGAATATTGGAATTGAACCCAAAGAACTGGTAAGCTGTA CTAATCACATCGTCTTATCTTTCGTCTAGACTTTCTCAGTCTGGTTACGT TACGTAGTTGTACTTCTATTGTTTTTACAGCTATATATCCTGTCCTATAC GTAGCGTTCTTAAAGCTCGTGATTTTTCTTTAACGTTGGAATTTGTTTTT GGTTTTAGGTCAGTTATTGGTTCAGTTATGACCGCGATGCACTGACCTTG AAATACGGCAAAGGGCACGTTATGACTCAAACAACACTATTAGAGTTCCC TTTCTTGGAAGGCAAATCGAAAGGCGAAGAAGAGCACATTCGAAAGAAGT ACAATATTTTCTTCAATGCAGGTTAGACTTTGAAGTCGCTAATATTCTCA ATcgacttttgttttttttccctTGGTTATCAACTTCAACTAAGTTTGGG TATaaatctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctg tctgtctgtctgtctgtctgtcttaCAATATTGTCACCGGATTTGTCGTT TTATTGGATTTCTCTCATATAATGTGTATGTCGGATGGAAATGGTTATTT AGGTGTGTGACATTGGGTTGATGGATGTTTACTAATTGGCAGTTTTTACA CTAGGCTTGGATAGTGTTagttttttcttttggaaaggtgGGTTTTGGCT TTTATCAACAGTTCTGTATTGTTTTCTTCGTGTCTCTCTGTCTGTCTGTC CGTCCGAAGATTTATGGGTTGACCAATTTTCTTACCATTTGAGGCTAGGT TCGAATTattaattttatatttatttttctagaAGAGAAAAAATACGTGG TTGCCGAATCGGAGAAAATGGTGGAGGACGTGACAGGAGGACTGGTCAAA ATCGAACAGACGTTACAATTCTATCCCAACCCTCTCGTGACTAATTTCTC ACCTATCGTTAAAGATAGCTCGAAAGTCACTTTGTTCGATCTTGATCGAG ATCAATTCATGTTTTCAAGTAGCCTACCACCTGCCTGTAAAGAACTCTAC GATAATATCAAAGGTACGTCTAGTTAATTTCATAACAGATCATCTATTCT GCTCCTAAAGGGATTTGGCAAATGTGCCGATCTAACTTGGTTGTCTGTCA AAACAATTAAAACTACGTTGCTTTTTGGTTTTAATGATTATAAGATTGAC ATATGATTTTGGTGTGATTGCTTTGCTTTAGCCAATAACTGCGCACAAAA TCTCATTCCGCAAACATGAGCAAATTATTTTATGGAACCATGCCCTTTAG AGTGAATACTTGCCATGCCATGCGTTGAGTAGTAGAATCTGCTCAGAGAC TAATGTCTAGTTGACCTCTAATTTCTAACGTATTTTGATGGTCTAAAATA GACGTTACTGCTTAGAAAAATAGCCTTGACGTTTTAAATATAGGCAAGTT ATTCATCAGTAGTCATTATCATCTGCNGTTGATCTCtaatttctaatatt tttttggtTCATGGTCTAGAATAGACGTTACTACTTAAAAAATCATTATC GTCTACAGGTCTTCAACTGGAGTTTCCAGAAGATCCTATTACGAAACTTT CAGACGCCATACGGTACAGCATCAACACACCTGGAATGACTTTAtatgaa aagttgaaagaaaaggaagaacAGTTTGCTTACCTACGTGTAACACTTGG GCCTGACCGCCGTACCGCACCTGGTATTCCCTATGTTCTAGAGATCTGGC CTTCAGGTAAGGAGATTTGATTATGTCCGGCATTGACTAGTTTACTGTag tattaccttaagggaattaattttcgcgggacttattttcACGACTAACT TCGACTgtaaattttcgcgaggatttaatttcgcgaattgacgaattttt tcagattttcagatttttccttAGTTTGATTACGAGATTTTGTGTGTTTA GTAGAGTCTTATATCTTCATAactgaataaaaatttattcgaattacaga gacatTCGAGAGTCATTTAAGAGAGTTTCCATTAGATCAAAAAACTTAGA ATTTTTAgcgtaaaaaaattaattttcgagaggatcaaattttgcgaatt tagCGAGAGAtgagagtttgaaaattttcgcgagagattatatttcgcga aaaagttgaaattcgcgaaaattcgcgaaatataatccccgcgaaaattt attcccttaaggtaccatgtttgtaatttttgatagaAAGATCGGGGACC GCCATAGAGCTTGGTGTATGTGGTTTATACTATGATTTTCATTACATGGT ATAATTATTTTGATGTATCCCTCTAACAACCCTAACTCCACAATGGGATT TGGTTTAGGCCTACCAGGGTCCAATGTCTGTCTTTGTGAGCACGTTAAAT GTACTATGTACCAGTGTATCTCTCGCAGTACCTCTAcggcaataaatttt gaaattagccgtagatatcgggtctgtaTTTAGACTAATGTTAACGCAAT TACACCAGACATTACAAGTCAATTCTGCCATGCACTTTTTCAAATTATAC GCTCAtatgttttcttcttttatattaCTAATTGCGAAATTAGCATGATC AGGGAATTGTCCAGGGTTGATGAATCTATATTTTCTTTCTCAGGAAAAGG AAGCCCTATCCATAATCATGGAGGAGCATGTGCAATAATTAAAGTGCTAT TTGGTAGAATCACTTGCAACATCTACAACAAGATCACACAGCCACCGGAA CAAACAGAAATGCAACCTTTGACCAGATTTGATCTCAATGAAGAGCAAAT GACCTGGATAGGCCCCAACTGGTATCAAACGCATCGCTTACACAACAACA CTGATGATTTCTGCGCAACCATACAATGCTATCGATATGACTTCAATGAT GCAATTCACTGGCCCAATTTCGATTATGTGGGTTTTGTAGAAGACAAAGA AAAATACGAGTTGGAAGAATTCTATCCAGATAGCGATTTCACGTTCGTTA ATTTGAGACGAACTGTTCTTGACGAGtttcaaaaattcttagaaGGATGA GTTATGATTTTAACTTTCCTGCAAAGATTGCAGTGCTTTcaagtaaataa atattttgttagCGTTTTTTTTTCACAGTAAACAGTAAACCATGTTACAT TTTAAAACGTTATACTGTTGAACCCCCATGTAATTTGTATTTAATAAATT GAAAGACCTATGTGTGAATCGAAAAAAAACTTGATAATTTCacaattaaa a
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000729XLOC_000729Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001363-exon-sc0000010-1491911889:600456..600895TCONS_00001363-exon-sc0000010-1491911889:600456..600895Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1510915933:600456..600895TCONS_00001363-exon-sc0000010-1510915933:600456..600895Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1575043694:600456..600895TCONS_00001363-exon-sc0000010-1575043694:600456..600895Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1491911889:601064..601226TCONS_00001363-exon-sc0000010-1491911889:601064..601226Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1510915933:601064..601226TCONS_00001363-exon-sc0000010-1510915933:601064..601226Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1575043694:601064..601226TCONS_00001363-exon-sc0000010-1575043694:601064..601226Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1491911889:601688..601918TCONS_00001363-exon-sc0000010-1491911889:601688..601918Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1510915933:601688..601918TCONS_00001363-exon-sc0000010-1510915933:601688..601918Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1575043694:601688..601918TCONS_00001363-exon-sc0000010-1575043694:601688..601918Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1491911889:602414..602611TCONS_00001363-exon-sc0000010-1491911889:602414..602611Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1510915933:602414..602611TCONS_00001363-exon-sc0000010-1510915933:602414..602611Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1575043694:602414..602611TCONS_00001363-exon-sc0000010-1575043694:602414..602611Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1491911889:603499..604106TCONS_00001363-exon-sc0000010-1491911889:603499..604106Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1510915933:603499..604106TCONS_00001363-exon-sc0000010-1510915933:603499..604106Clytia hemisphaericaexon
TCONS_00001363-exon-sc0000010-1575043694:603499..604106TCONS_00001363-exon-sc0000010-1575043694:603499..604106Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:600456..604106 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.200675 0.332575 0.240835 0.350167 0.214861 0 0.313502 1.02432 10.1039 28.8426 2.56491 2.5181 5.11558 3.23592 14.3419 1.42295 29.1754 24.8956 41.7397 64.4017 2.01969 1.85643 10.0774 19.0457 56.1734 232.771 51.3204 91.5077 121.536 64.3962
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001363 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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