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  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 28 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 28 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 28 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 29 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 30 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 31 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 33 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 33 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 33 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 34 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 35 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 36 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 39 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 39 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 39 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 39 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 40 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 41 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 42 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 45 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 109 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant transcript - assumed 'transcript' in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 113 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: derives from in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 115 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
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  • Notice: Trying to get property of non-object in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 413 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Use of undefined constant mRNA - assumed 'mRNA' in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Undefined index: mRNA in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).
  • Notice: Trying to get property of non-object in include() (line 417 of /var/www/marimba/sites/all/themes/sea_theme/tripal_feature_relationships.tpl.php).

TCONS_00001360 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001360
Unique NameTCONS_00001360
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1192

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001360 ID=TCONS_00001360|Name=TCONS_00001360|organism=Clytia hemisphaerica|type=transcript|length=1192bp
TTATTGGTTTAGTTACGACCGCGATGCACTGACCTTGAAATACGGCAAAG
GGCACGTTATGACTCAAACAACACTGTTAGAATTCCCTTTCTTGGAAGGC
AAATCGAAAGGCGAAGAAGAACACATCCGAAAGAAGTACAATATTTTCTT
CAACGCAGAGAGAAAATACGTGGTTACCGAATCAGAGAAAATAATGGAGG
ACGTGACAGGAGGACTGGTCAAAATCGAACAGACGTTACAATTCTATTCC
AACCCTCTCGTGACTAATTTCTCACCTATCGTTAAAGATAGTTCGAAAGT
CACTTTGCTTGATCTTGATCGAGATCAATTCATGTTTTCCAGTAGTCTAC
CACCTGCCTGTAAAGAACTCTACGATAATATCAAAGGTCTTCAACTGGAG
TTTCCAGAAGATCCTATTACGAAACTTTCAGACGCCATACGGTACAGCAT
CAACACACCTGGAATGACTTTAtatgaaaagttgaaagaaaaggaagaac
AGTTTGCTTACCTACGTGTAACACTTGGGCCTGACCGCCGTACCGCACCT
GGTATTCCCTATGTTCTAGAGATCTGGCCTTCAGGAAAAGGAAGCCCTAT
CCATAATCATGGAGGAGCATGTGCAATAATTAAAGTGCTATTTGGTAGAA
TCACTTGCAACATCTACAACAAGATCACACAGCCACCGGAACAAACAGAA
ATGCAACCTTTGACCAGATTTGATCTCAATGAAGAGCAAATGACCTGGAT
AGGCCCCAACTGGTATCAAACGCATCGCTTACACAACAACACTGATGATT
TCTGCGCAACCATACAATGCTATCGATATGACTTCAATGATGCAATTCAC
TGGCCCAATTTCGATTATGTGGGTTTTGTAGAAGACAAAGAAAAATACGA
GTTGGAAGAATTCTATCCAGATAGCGATTTCACGTTCGTTAATTTGAGAC
GAACTGTTCTTGACGAGtttcaaaaattcttagaaGGATGAGTTATGATT
TTAACTTTCCTGCAAAGATTGCAGTGCTTTcaagtaaataaatattttgt
tagCGTTTTTTTTTCACAGTAAACAGTAAACCATGTTACATTTTAAAACG
TTATACTGTTGAACCCCCATGTAATTTGTATTTAATAAATTGAAAGACCT
ATGTGTGAATCGAAAAAAAACTTGATAATTTCacaattaaaa
Run BLAST on NCBI

transcript from alignment at sc0000010:597029..604106+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001360 ID=TCONS_00001360|Name=TCONS_00001360|organism=Clytia hemisphaerica|type=transcript|length=7078bp|location=Sequence derived from alignment at sc0000010:597029..604106+ (Clytia hemisphaerica)
TTATTGGTTTAGTTACGACCGCGATGCACTGACCTTGAAATACGGCAAAG GGCACGTTATGACTCAAACAACACTGTTAGAATTCCCTTTCTTGGAAGGC AAATCGAAAGGCGAAGAAGAACACATCCGAAAGAAGTACAATATTTTCTT CAACGCAGGTTAGATTTCGAACTCACCAATAATATTATCAATCAACTTTT GTCTACTTtgttaaaaagtttattttaagTCTGTCCGTCTGTCTACCTGT ATGTCTGTATGCCCGAGAAAacctttgactttttttttacaaatcgACAC TGAGTTCGAAttattgattttgtattttaatttttcttgaaGAGAGAAAA TACGTGGTTACCGAATCAGAGAAAATAATGGAGGACGTGACAGGAGGACT GGTCAAAATCGAACAGACGTTACAATTCTATTCCAACCCTCTCGTGACTA ATTTCTCACCTATCGTTAAAGATAGTTCGAAAGTCACTTTGCTTGATCTT GATCGAGATCAATTCATGTTTTCCAGTAGTCTACCACCTGCCTGTAAAGA ACTCTACGATAATATTAAAGGTATATCTAGTTGACTTCCAATGTCTAATT TTTTGTGGTCTTTAGTTTCCTAATAAATAATACCATACCAGAACCCATAG TATAATTAATGTATATCGTGCTGCTCATGCTCTGTCTTTATCAAACTGCA ATCACCGCATGTCAAATCTTGTTGTCGAATATGTCGTTTGCTCTTCTCTC GTTTTAAAGGCCagagtaagtaagtaagtctaaGACCGCAGTCAGAAGTC TGAAGGCTTCTTTCGACAGCTATTACCCAAAGGTAAAAAGGGTGGGCGCC AATTTTTACTCCCTGGACTGCTGCACTtatccttgatccttctcttaatt gctgagcatcaaacaaagaagcatcaagtaccattttgggaatctttggt attaCCCGCTTGGGGTGGAACCCACAACCtagcgaaccgtagccggaagc tctaccactgcactacggtcgctgaaGGCCATAGgtataaatactttttg gaaattaGAAATCATTGTCTTCTGCAGGTCTCCAACTGGAGTTTCCAGAA GATCCTATTACGAAACTTTCAGACGCCATACGGTACAGCATCAACACACC TGGAATGACTTTAtacgaaaagttgaaagaaaaggaagaacAGTTTGCTT ACCTACGTGTAACACTCGGTCCTGACCGCCGNAGCCGGaagctctaccac tgcactacggtcgctgaaGGCCATAGgtataaatactttttggaaatttg aaatcatTATCGTCTACCGCGCCTGGTATTCCCTATGTTCTAGAGATCTG GCCTTCAGGTAAGGAGATGGTTCAGTGCAGCTCGCTTTGGCAAGTTAACC GTAGTGGTAGTAACATGTTTTCAATATTTAAGAGGGAGATCATGAATCGC ATTACTCGTTGATGTGTCTTGATGTATACCGGATGGTCCAAAGAAAGTTT ccataaattcaaaatttatgattttcatCACAAAGTGTTAGAACAACTAT CCACCGCACAAACAGATAGGGTTGATTCTACCAGCGTCGATGAAtatcaa tttctgaaaattttccgATAGAGTGACTTCAGACATCGGTGGTCTCTCGC CCCTGGGAAACTATAACTATACTATAAAAGTAACTTAATTCNACTTTTTC AGATTATACGCTCAtatgttttcttcttttatattaCTAACTGCGAAATA AATTAGCATGGTCAGGGGATTGTCCAGGGTTGATGAATCTATATTTGCTT TCTTTCTCAGGAAAAGGAAGCCCTATCCATAATCATGGAGGAGCATGCGC TATCATTAAAGTGCTATTTGGTAGAATCACTTGCAACATCTACAACAAGA TCACACAGCCACCAGAACAAACAGAAATGCAACCTTTGACCAGATTTGAT CTCAATGAAGAGCAAATGACCTGGATAGGCCCCAACTGGTATCAAACGCA TCGCTTACACAATAACACTGATGATTTCTGCGCAACCATACAATGCTATC GATATGACTTCAATGATGCAATTCGCTGCCCAAATTTCCATTATGTGGGT TTTGTAGAAGGCAAAGAAAAATATGAGTTGGAAGAATTCTATCCAGATAG CGATTTCACGTTCGTTAATTTGAGACGAACTGTTCTTGACGAGTATCAAA AATTCTTGGAAGGCTGAGTagtgattttgattttattttttttctgtaaa agtgttgtttttaatcaaattttatttaGCCCTCTTAGCCGAGGGTAATC TAAAAGATATTTTAGAGCTTCTACagtttaaccctatttttatcagtgGG GGTGTTTTCCATCAGCCTGGCATTTATTTGCTAATAGCTTTGTATTTGTC TGATACTTTCGTACACAAGTCGTTTCTTTTGTCAGTAATGAGTTGTGGTA GCGAACCCCAAATGAACTTTCTGGTGCGAACCCTGAAACAAGATTTTGAC AAGATAGTCTACCTGCAGGCTTTTATTGGCACGGCCAGTAAAAGAGTCGC GGTATTTCAGCACGGTAAAATAAAAAGACGCAATTGTTAAAGAGTTAACG ACTTAAAAGTATCAAAGAGTTGGACAATAAAAGGCTAtttcatatttaaa aaaaaatcaaatttgtttaaTACCGATTTAGTTGTATGAAAAGAGATTCT CGAAAAACATTATCAGTGATTCGACAAAACATACTTTCACCGAAGTTTCT TTTAAGATAATCCTATAGAGTCTGTGTAAAACATGATAAGGCAAGTGGGT AAAACGATATGAACCTTTTGTCGGGAGATGATGATTCGTATGACAATCTC GTAATTAGGAACTTATAGTATTTTTATAGACTTAAAAAAGCTTTGTTAGT TCTATGTTGTTTTAATGATCTTTGATGTTTAGTAAattcaaacaaacaaa cgaAAATACTAGTAAGGAAATAATTCTCGTTCCAACACaatcttacacgt ttttttataagaacaaactatataagaacataaggcttcgatgaccaaaa tgttaagaataagttaagaacattttaaggcttcgcggactcaaAAACAG CCAATtacttaggaaaatggacaaaaatacataaaaattgggggaaaata agaacatgttaaggacattttgaaactcaaaaagttaagaacatctgaag gcttcaaaaaatttggatgttcttataaaaaaacgtgtatctgtttgaaa gaaaattagtttaCTGGTAATAGACAAGCTCCTCTTCTTTCCTAGAAAGG TGTTTTACATTCTGcgaaaaaaaaaacctaaaaGTTTTTGCTGACTCAAA CAGTGATTTGAATCTGTGACTATCTTGTGACTATCAGCCTCTTTCCAATC CTTTATATAAAGCCGCCATAATGTGTACgaatcttcaaaactactttact TGTAAACCGCGAGGGAGACAATTTAAAACGTGCATCATTCAACGAAAACG GCAACTAAGTTTTCAAGAGAAACTGTTGTTAGAAGCTGAGCTGTTTAAAC CAAGGTGAGCTATGCCTCGAAGAAGGACTGCTGTCTTTCCCGTAAACGGT CAAGGGACTCTAGTCTATACCGTTCGTAAGAAGAGTCAATTCACCATCTA CATAACACCTGACAAACAAAAGGTACCAAAAAGCTTAGATTTCGATAGTG AATTCTCAGAGTTTGAAGAGGAGCAAAGTTTTGATACGGAGAACTACATC TCGTTGACTGTTGGTGAGAATTTTGCACGTTTCAAACTGAAGATGCATAA AGATGGTGAAGAGAGAGTGTTGAAAGAAGAATATGGGAAGAATATTGGAA TTGAACCCAAAGAACTGGTAAGCTGTACTAATCACATCGTCTTATCTTTC GTCTAGACTTTCTCAGTCTGGTTACGTTACGTAGTTGTACTTCTATTGTT TTTACAGCTATATATCCTGTCCTATACGTAGCGTTCTTAAAGCTCGTGAT TTTTCTTTAACGTTGGAATTTGTTTTTGGTTTTAGGTCAGTTATTGGTTC AGTTATGACCGCGATGCACTGACCTTGAAATACGGCAAAGGGCACGTTAT GACTCAAACAACACTATTAGAGTTCCCTTTCTTGGAAGGCAAATCGAAAG GCGAAGAAGAGCACATTCGAAAGAAGTACAATATTTTCTTCAATGCAGGT TAGACTTTGAAGTCGCTAATATTCTCAATcgacttttgttttttttccct TGGTTATCAACTTCAACTAAGTTTGGGTATaaatctgtctgtctgtctgt ctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtct taCAATATTGTCACCGGATTTGTCGTTTTATTGGATTTCTCTCATATAAT GTGTATGTCGGATGGAAATGGTTATTTAGGTGTGTGACATTGGGTTGATG GATGTTTACTAATTGGCAGTTTTTACACTAGGCTTGGATAGTGTTagttt tttcttttggaaaggtgGGTTTTGGCTTTTATCAACAGTTCTGTATTGTT TTCTTCGTGTCTCTCTGTCTGTCTGTCCGTCCGAAGATTTATGGGTTGAC CAATTTTCTTACCATTTGAGGCTAGGTTCGAATTattaattttatattta tttttctagaAGAGAAAAAATACGTGGTTGCCGAATCGGAGAAAATGGTG GAGGACGTGACAGGAGGACTGGTCAAAATCGAACAGACGTTACAATTCTA TCCCAACCCTCTCGTGACTAATTTCTCACCTATCGTTAAAGATAGCTCGA AAGTCACTTTGTTCGATCTTGATCGAGATCAATTCATGTTTTCAAGTAGC CTACCACCTGCCTGTAAAGAACTCTACGATAATATCAAAGGTACGTCTAG TTAATTTCATAACAGATCATCTATTCTGCTCCTAAAGGGATTTGGCAAAT GTGCCGATCTAACTTGGTTGTCTGTCAAAACAATTAAAACTACGTTGCTT TTTGGTTTTAATGATTATAAGATTGACATATGATTTTGGTGTGATTGCTT TGCTTTAGCCAATAACTGCGCACAAAATCTCATTCCGCAAACATGAGCAA ATTATTTTATGGAACCATGCCCTTTAGAGTGAATACTTGCCATGCCATGC GTTGAGTAGTAGAATCTGCTCAGAGACTAATGTCTAGTTGACCTCTAATT TCTAACGTATTTTGATGGTCTAAAATAGACGTTACTGCTTAGAAAAATAG CCTTGACGTTTTAAATATAGGCAAGTTATTCATCAGTAGTCATTATCATC TGCNGTTGATCTCtaatttctaatatttttttggtTCATGGTCTAGAATA GACGTTACTACTTAAAAAATCATTATCGTCTACAGGTCTTCAACTGGAGT TTCCAGAAGATCCTATTACGAAACTTTCAGACGCCATACGGTACAGCATC AACACACCTGGAATGACTTTAtatgaaaagttgaaagaaaaggaagaacA GTTTGCTTACCTACGTGTAACACTTGGGCCTGACCGCCGTACCGCACCTG GTATTCCCTATGTTCTAGAGATCTGGCCTTCAGGTAAGGAGATTTGATTA TGTCCGGCATTGACTAGTTTACTGTagtattaccttaagggaattaattt tcgcgggacttattttcACGACTAACTTCGACTgtaaattttcgcgagga tttaatttcgcgaattgacgaattttttcagattttcagatttttccttA GTTTGATTACGAGATTTTGTGTGTTTAGTAGAGTCTTATATCTTCATAac tgaataaaaatttattcgaattacagagacatTCGAGAGTCATTTAAGAG AGTTTCCATTAGATCAAAAAACTTAGAATTTTTAgcgtaaaaaaattaat tttcgagaggatcaaattttgcgaatttagCGAGAGAtgagagtttgaaa attttcgcgagagattatatttcgcgaaaaagttgaaattcgcgaaaatt cgcgaaatataatccccgcgaaaatttattcccttaaggtaccatgtttg taatttttgatagaAAGATCGGGGACCGCCATAGAGCTTGGTGTATGTGG TTTATACTATGATTTTCATTACATGGTATAATTATTTTGATGTATCCCTC TAACAACCCTAACTCCACAATGGGATTTGGTTTAGGCCTACCAGGGTCCA ATGTCTGTCTTTGTGAGCACGTTAAATGTACTATGTACCAGTGTATCTCT CGCAGTACCTCTAcggcaataaattttgaaattagccgtagatatcgggt ctgtaTTTAGACTAATGTTAACGCAATTACACCAGACATTACAAGTCAAT TCTGCCATGCACTTTTTCAAATTATACGCTCAtatgttttcttcttttat attaCTAATTGCGAAATTAGCATGATCAGGGAATTGTCCAGGGTTGATGA ATCTATATTTTCTTTCTCAGGAAAAGGAAGCCCTATCCATAATCATGGAG GAGCATGTGCAATAATTAAAGTGCTATTTGGTAGAATCACTTGCAACATC TACAACAAGATCACACAGCCACCGGAACAAACAGAAATGCAACCTTTGAC CAGATTTGATCTCAATGAAGAGCAAATGACCTGGATAGGCCCCAACTGGT ATCAAACGCATCGCTTACACAACAACACTGATGATTTCTGCGCAACCATA CAATGCTATCGATATGACTTCAATGATGCAATTCACTGGCCCAATTTCGA TTATGTGGGTTTTGTAGAAGACAAAGAAAAATACGAGTTGGAAGAATTCT ATCCAGATAGCGATTTCACGTTCGTTAATTTGAGACGAACTGTTCTTGAC GAGtttcaaaaattcttagaaGGATGAGTTATGATTTTAACTTTCCTGCA AAGATTGCAGTGCTTTcaagtaaataaatattttgttagCGTTTTTTTTT CACAGTAAACAGTAAACCATGTTACATTTTAAAACGTTATACTGTTGAAC CCCCATGTAATTTGTATTTAATAAATTGAAAGACCTATGTGTGAATCGAA AAAAAACTTGATAATTTCacaattaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000729XLOC_000729Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001360-exon-sc0000010-1491911889:597029..597186TCONS_00001360-exon-sc0000010-1491911889:597029..597186Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1510915933:597029..597186TCONS_00001360-exon-sc0000010-1510915933:597029..597186Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1575043694:597029..597186TCONS_00001360-exon-sc0000010-1575043694:597029..597186Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1491911889:597371..597569TCONS_00001360-exon-sc0000010-1491911889:597371..597569Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1510915933:597371..597569TCONS_00001360-exon-sc0000010-1510915933:597371..597569Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1575043694:597371..597569TCONS_00001360-exon-sc0000010-1575043694:597371..597569Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1491911889:601890..601918TCONS_00001360-exon-sc0000010-1491911889:601890..601918Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1510915933:601890..601918TCONS_00001360-exon-sc0000010-1510915933:601890..601918Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1575043694:601890..601918TCONS_00001360-exon-sc0000010-1575043694:601890..601918Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1491911889:602414..602611TCONS_00001360-exon-sc0000010-1491911889:602414..602611Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1510915933:602414..602611TCONS_00001360-exon-sc0000010-1510915933:602414..602611Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1575043694:602414..602611TCONS_00001360-exon-sc0000010-1575043694:602414..602611Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1491911889:603499..604106TCONS_00001360-exon-sc0000010-1491911889:603499..604106Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1510915933:603499..604106TCONS_00001360-exon-sc0000010-1510915933:603499..604106Clytia hemisphaericaexon
TCONS_00001360-exon-sc0000010-1575043694:603499..604106TCONS_00001360-exon-sc0000010-1575043694:603499..604106Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:597029..604106 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.160874 0 0.564168 0 0 0.367525 0.38933 0.360541 6.83958 11.3942 1.48641 1.91003 2.09424 1.2244 9.63785 0.99052 20.4132 18.8829 47.989 48.6334 2.84361 0.664501 4.96556 4.31117 57.3078 104.561 13.3232 27.3194 3.79398 1.67637
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001360 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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