TCONS_00001357 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001357
Unique NameTCONS_00001357
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1751

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001357 ID=TCONS_00001357|Name=TCONS_00001357|organism=Clytia hemisphaerica|type=transcript|length=1751bp
GGTGATTCAAACAGGGATTTCATTTGtgtatcttataaaaaacatgccGA
TGTTGTCCCTTTCCCatactttatataaaaagtgATATGCACAATCAGTT
TCTTGAAAACTATGAGCTCAGATTTCAGAATTTCGCTTTTTAAACGAGGG
AGACAATTTAAAACTTGCATCATTCAACGAAAACGGCAAATAAGTTTTCA
AGAGAAACTGTTGTTAGAAGCTGAGCTGTATAACCAAGTTGAACTATGCC
TCAAAGAAGGACTGCTGTCTTCCCCGTAAACGGTCAAGGGACTCTAGTCT
ATACCGTTCGTAAAAAGAGTCAATTCACCATCTACATAACACCTGACAAA
CAAAAGGTACCAAAAAGCTTGGATTTTGATAGTGAATTCTCAGAGTTTGA
AGAGGAGCAAAGTTTTGATACGGAGAACTACATCTCGTTGACTGTTGGTG
AGAATTTTGCACGTTTCAAACTGAAGATGCATAAAGATGATGAAGAGAGA
GTGTTGAAAGAAGAATATGGGAAAAATATTGGAATTGAACCTAAAGAACT
GGTCAGTTATTGGTTCAGTTATGACCGCGATGCACTGACCTTGAAATACG
GCAAAGGGCACGTTATGACTCAAACAACACTATTAGAGTTCCCTTTCTTG
GAAGGCAAATCGAAAGGCGAAGAAGAGCACATTCGAAAGAAGTACAATAT
TTTCTTCAATGCAGaAGAGAAAAAATACGTGGTTGCCGAATCGGAGAAAA
TGGTGGAGGACGTGACAGGAGGACTGGTCAAAATCGAACAGACGTTACAA
TTCTATCCCAACCCTCTCGTGACTAATTTCTCACCTATCGTTAAAGATAG
CTCGAAAGTCACTTTGTTCGATCTTGATCGAGATCAATTCATGTTTTCAA
GTAGCCTACCACCTGCCTGTAAAGAACTCTACGATAATATCAAAGGTCTT
CAACTGGAGTTTCCAGAAGATCCTATTACGAAACTTTCAGACGCCATACG
GTACAGCATCAACACACCTGGAATGACTTTAtatgaaaagttgaaagaaa
aggaagaacAGTTTGCTTACCTACGTGTAACACTTGGGCCTGACCGCCGT
ACCGCACCTGGTATTCCCTATGTTCTAGAGATCTGGCCTTCAGGAAAAGG
AAGCCCTATCCATAATCATGGAGGAGCATGTGCAATAATTAAAGTGCTAT
TTGGTAGAATCACTTGCAACATCTACAACAAGATCACACAGCCACCGGAA
CAAACAGAAATGCAACCTTTGACCAGATTTGATCTCAATGAAGAGCAAAT
GACCTGGATAGGCCCCAACTGGTATCAAACGCATCGCTTACACAACAACA
CTGATGATTTCTGCGCAACCATACAATGCTATCGATATGACTTCAATGAT
GCAATTCACTGGCCCAATTTCGATTATGTGGGTTTTGTAGAAGACAAAGA
AAAATACGAGTTGGAAGAATTCTATCCAGATAGCGATTTCACGTTCGTTA
ATTTGAGACGAACTGTTCTTGACGAGtttcaaaaattcttagaaGGATGA
GTTATGATTTTAACTTTCCTGCAAAGATTGCAGTGCTTTcaagtaaataa
atattttgttagCGTTTTTTTTTCACAGTAAACAGTAAACCATGTTACAT
TTTAAAACGTTATACTGTTGAACCCCCATGTAATTTGTATTTAATAAATT
GAAAGACCTATGTGTGAATCGAAAAAAAACTTGATAATTTCacaattaaa
a
Run BLAST on NCBI

protein sequence of TCONS_00001357-protein

>TCONS_00001357-protein ID=TCONS_00001357-protein|Name=TCONS_00001357-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
MPQRRTAVFPVNGQGTLVYTVRKKSQFTIYITPDKQKVPKSLDFDSEFSE
FEEEQSFDTENYISLTVGENFARFKLKMHKDDEERVLKEEYGKNIGIEPK
ELVSYWFSYDRDALTLKYGKGHVMTQTTLLEFPFLEGKSKGEEEHIRKKY
NIFFNAEEKKYVVAESEKMVEDVTGGLVKIEQTLQFYPNPLVTNFSPIVK
DSSKVTLFDLDRDQFMFSSSLPPACKELYDNIKGLQLEFPEDPITKLSDA
IRYSINTPGMTLYEKLKEKEEQFAYLRVTLGPDRRTAPGIPYVLEIWPSG
KGSPIHNHGGACAIIKVLFGRITCNIYNKITQPPEQTEMQPLTRFDLNEE
QMTWIGPNWYQTHRLHNNTDDFCATIQCYRYDFNDAIHWPNFDYVGFVED
KEKYELEEFYPDSDFTFVNLRRTVLDEFQKFLEG
Run BLAST on NCBI

transcript from alignment at sc0000010:596005..604106+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001357 ID=TCONS_00001357|Name=TCONS_00001357|organism=Clytia hemisphaerica|type=transcript|length=8102bp|location=Sequence derived from alignment at sc0000010:596005..604106+ (Clytia hemisphaerica)
GGTGATTCAAACAGGGATTTCATTTGtgtatcttataaaaaacatgccGA
TGTTGTCCCTTTCCCatactttatataaaaagtgATATGCACAATCAGTT
TCTTGAAAACTATGAGCTCAGATTTCAGAATTTCGCTTTTTAAACGAGGG
AGACAATTTAAAACTTGCATCATTCAACGAAAACGGCAAATAAGTTTTCA
AGAGAAACTGTTGTTAGAAGCTGAGCTGTATAACCAAGTTGAACTATGCC
TCAAAGAAGGACTGCTGTCTTCCCCGTAAACGGTCAAGGGACTCTAGTCT
ATACCGTTCGTAAAAAGAGTCAATTCACCATCTACATAACACCTGACAAA
CAAAAGGTACCAAAAAGCTTGGATTTTGATAGTGAATTCTCAGAGTTTGA
AGAGGAGCAAAGTTTTGATACGGAGAACTACATCTCGTTGACTGTTGGTG
AGAATTTTGCACGTTTCAAACTGAAGATGCATAAAGATGATGAAGAGAGA
GTGTTGAAAGAAGAATATGGGAAAAATATTGGAATTGAACCTAAAGAACT
GGTAAGCTGTACCAATCACATCGTTTTTTCTCGTACTTTTATTAACTTTT
AACTAATTCAATTTGTAATTCCGTTGCGAAATATTCTTTTAAATTACAAG
TCTGTATGTAACATAGTTTTTGGATACCCTACTTTCTAAGATTCCAGCAA
CGAACATCCCTTTCGAttgtaaaattttcatttttatcaaccCTGATGGA
CCTTTTTGGACCTCTCCAAGGAGACCTAAAAGTAGCCATTATAGAGTACA
AACTTTACGATTTGTCTAAGCCATATAAGTACACCTGCCAATAATGCTGG
GTCATTCATTCTGACTGACTTTTAAAATTACTGATTCAGGGCTGACTCTT
TTTCCCAGAGCTATTATGTTGGATCAAATTTATACTTCAgttactttttt
ttctttcttacaagTATTGCTTAAAAGCAATCGATTTTCTTTACAATCAG
ATCTCATTTTTGGTTGCAGGTCACTTATTGGTTTAGTTACGACCGCGATG
CACTGACCTTGAAATACGGCAAAGGGCACGTTATGACTCAAACAACACTG
TTAGAATTCCCTTTCTTGGAAGGCAAATCGAAAGGCGAAGAAGAACACAT
CCGAAAGAAGTACAATATTTTCTTCAACGCAGGTTAGATTTCGAACTCAC
CAATAATATTATCAATCAACTTTTGTCTACTTtgttaaaaagtttatttt
aagTCTGTCCGTCTGTCTACCTGTATGTCTGTATGCCCGAGAAAaccttt
gactttttttttacaaatcgACACTGAGTTCGAAttattgattttgtatt
ttaatttttcttgaaGAGAGAAAATACGTGGTTACCGAATCAGAGAAAAT
AATGGAGGACGTGACAGGAGGACTGGTCAAAATCGAACAGACGTTACAAT
TCTATTCCAACCCTCTCGTGACTAATTTCTCACCTATCGTTAAAGATAGT
TCGAAAGTCACTTTGCTTGATCTTGATCGAGATCAATTCATGTTTTCCAG
TAGTCTACCACCTGCCTGTAAAGAACTCTACGATAATATTAAAGGTATAT
CTAGTTGACTTCCAATGTCTAATTTTTTGTGGTCTTTAGTTTCCTAATAA
ATAATACCATACCAGAACCCATAGTATAATTAATGTATATCGTGCTGCTC
ATGCTCTGTCTTTATCAAACTGCAATCACCGCATGTCAAATCTTGTTGTC
GAATATGTCGTTTGCTCTTCTCTCGTTTTAAAGGCCagagtaagtaagta
agtctaaGACCGCAGTCAGAAGTCTGAAGGCTTCTTTCGACAGCTATTAC
CCAAAGGTAAAAAGGGTGGGCGCCAATTTTTACTCCCTGGACTGCTGCAC
Ttatccttgatccttctcttaattgctgagcatcaaacaaagaagcatca
agtaccattttgggaatctttggtattaCCCGCTTGGGGTGGAACCCACA
ACCtagcgaaccgtagccggaagctctaccactgcactacggtcgctgaa
GGCCATAGgtataaatactttttggaaattaGAAATCATTGTCTTCTGCA
GGTCTCCAACTGGAGTTTCCAGAAGATCCTATTACGAAACTTTCAGACGC
CATACGGTACAGCATCAACACACCTGGAATGACTTTAtacgaaaagttga
aagaaaaggaagaacAGTTTGCTTACCTACGTGTAACACTCGGTCCTGAC
CGCCGNAGCCGGaagctctaccactgcactacggtcgctgaaGGCCATAG
gtataaatactttttggaaatttgaaatcatTATCGTCTACCGCGCCTGG
TATTCCCTATGTTCTAGAGATCTGGCCTTCAGGTAAGGAGATGGTTCAGT
GCAGCTCGCTTTGGCAAGTTAACCGTAGTGGTAGTAACATGTTTTCAATA
TTTAAGAGGGAGATCATGAATCGCATTACTCGTTGATGTGTCTTGATGTA
TACCGGATGGTCCAAAGAAAGTTTccataaattcaaaatttatgattttc
atCACAAAGTGTTAGAACAACTATCCACCGCACAAACAGATAGGGTTGAT
TCTACCAGCGTCGATGAAtatcaatttctgaaaattttccgATAGAGTGA
CTTCAGACATCGGTGGTCTCTCGCCCCTGGGAAACTATAACTATACTATA
AAAGTAACTTAATTCNACTTTTTCAGATTATACGCTCAtatgttttcttc
ttttatattaCTAACTGCGAAATAAATTAGCATGGTCAGGGGATTGTCCA
GGGTTGATGAATCTATATTTGCTTTCTTTCTCAGGAAAAGGAAGCCCTAT
CCATAATCATGGAGGAGCATGCGCTATCATTAAAGTGCTATTTGGTAGAA
TCACTTGCAACATCTACAACAAGATCACACAGCCACCAGAACAAACAGAA
ATGCAACCTTTGACCAGATTTGATCTCAATGAAGAGCAAATGACCTGGAT
AGGCCCCAACTGGTATCAAACGCATCGCTTACACAATAACACTGATGATT
TCTGCGCAACCATACAATGCTATCGATATGACTTCAATGATGCAATTCGC
TGCCCAAATTTCCATTATGTGGGTTTTGTAGAAGGCAAAGAAAAATATGA
GTTGGAAGAATTCTATCCAGATAGCGATTTCACGTTCGTTAATTTGAGAC
GAACTGTTCTTGACGAGTATCAAAAATTCTTGGAAGGCTGAGTagtgatt
ttgattttattttttttctgtaaaagtgttgtttttaatcaaattttatt
taGCCCTCTTAGCCGAGGGTAATCTAAAAGATATTTTAGAGCTTCTACag
tttaaccctatttttatcagtgGGGGTGTTTTCCATCAGCCTGGCATTTA
TTTGCTAATAGCTTTGTATTTGTCTGATACTTTCGTACACAAGTCGTTTC
TTTTGTCAGTAATGAGTTGTGGTAGCGAACCCCAAATGAACTTTCTGGTG
CGAACCCTGAAACAAGATTTTGACAAGATAGTCTACCTGCAGGCTTTTAT
TGGCACGGCCAGTAAAAGAGTCGCGGTATTTCAGCACGGTAAAATAAAAA
GACGCAATTGTTAAAGAGTTAACGACTTAAAAGTATCAAAGAGTTGGACA
ATAAAAGGCTAtttcatatttaaaaaaaaatcaaatttgtttaaTACCGA
TTTAGTTGTATGAAAAGAGATTCTCGAAAAACATTATCAGTGATTCGACA
AAACATACTTTCACCGAAGTTTCTTTTAAGATAATCCTATAGAGTCTGTG
TAAAACATGATAAGGCAAGTGGGTAAAACGATATGAACCTTTTGTCGGGA
GATGATGATTCGTATGACAATCTCGTAATTAGGAACTTATAGTATTTTTA
TAGACTTAAAAAAGCTTTGTTAGTTCTATGTTGTTTTAATGATCTTTGAT
GTTTAGTAAattcaaacaaacaaacgaAAATACTAGTAAGGAAATAATTC
TCGTTCCAACACaatcttacacgtttttttataagaacaaactatataag
aacataaggcttcgatgaccaaaatgttaagaataagttaagaacatttt
aaggcttcgcggactcaaAAACAGCCAATtacttaggaaaatggacaaaa
atacataaaaattgggggaaaataagaacatgttaaggacattttgaaac
tcaaaaagttaagaacatctgaaggcttcaaaaaatttggatgttcttat
aaaaaaacgtgtatctgtttgaaagaaaattagtttaCTGGTAATAGACA
AGCTCCTCTTCTTTCCTAGAAAGGTGTTTTACATTCTGcgaaaaaaaaaa
cctaaaaGTTTTTGCTGACTCAAACAGTGATTTGAATCTGTGACTATCTT
GTGACTATCAGCCTCTTTCCAATCCTTTATATAAAGCCGCCATAATGTGT
ACgaatcttcaaaactactttactTGTAAACCGCGAGGGAGACAATTTAA
AACGTGCATCATTCAACGAAAACGGCAACTAAGTTTTCAAGAGAAACTGT
TGTTAGAAGCTGAGCTGTTTAAACCAAGGTGAGCTATGCCTCGAAGAAGG
ACTGCTGTCTTTCCCGTAAACGGTCAAGGGACTCTAGTCTATACCGTTCG
TAAGAAGAGTCAATTCACCATCTACATAACACCTGACAAACAAAAGGTAC
CAAAAAGCTTAGATTTCGATAGTGAATTCTCAGAGTTTGAAGAGGAGCAA
AGTTTTGATACGGAGAACTACATCTCGTTGACTGTTGGTGAGAATTTTGC
ACGTTTCAAACTGAAGATGCATAAAGATGGTGAAGAGAGAGTGTTGAAAG
AAGAATATGGGAAGAATATTGGAATTGAACCCAAAGAACTGGTAAGCTGT
ACTAATCACATCGTCTTATCTTTCGTCTAGACTTTCTCAGTCTGGTTACG
TTACGTAGTTGTACTTCTATTGTTTTTACAGCTATATATCCTGTCCTATA
CGTAGCGTTCTTAAAGCTCGTGATTTTTCTTTAACGTTGGAATTTGTTTT
TGGTTTTAGGTCAGTTATTGGTTCAGTTATGACCGCGATGCACTGACCTT
GAAATACGGCAAAGGGCACGTTATGACTCAAACAACACTATTAGAGTTCC
CTTTCTTGGAAGGCAAATCGAAAGGCGAAGAAGAGCACATTCGAAAGAAG
TACAATATTTTCTTCAATGCAGGTTAGACTTTGAAGTCGCTAATATTCTC
AATcgacttttgttttttttccctTGGTTATCAACTTCAACTAAGTTTGG
GTATaaatctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtct
gtctgtctgtctgtctgtctgtcttaCAATATTGTCACCGGATTTGTCGT
TTTATTGGATTTCTCTCATATAATGTGTATGTCGGATGGAAATGGTTATT
TAGGTGTGTGACATTGGGTTGATGGATGTTTACTAATTGGCAGTTTTTAC
ACTAGGCTTGGATAGTGTTagttttttcttttggaaaggtgGGTTTTGGC
TTTTATCAACAGTTCTGTATTGTTTTCTTCGTGTCTCTCTGTCTGTCTGT
CCGTCCGAAGATTTATGGGTTGACCAATTTTCTTACCATTTGAGGCTAGG
TTCGAATTattaattttatatttatttttctagaAGAGAAAAAATACGTG
GTTGCCGAATCGGAGAAAATGGTGGAGGACGTGACAGGAGGACTGGTCAA
AATCGAACAGACGTTACAATTCTATCCCAACCCTCTCGTGACTAATTTCT
CACCTATCGTTAAAGATAGCTCGAAAGTCACTTTGTTCGATCTTGATCGA
GATCAATTCATGTTTTCAAGTAGCCTACCACCTGCCTGTAAAGAACTCTA
CGATAATATCAAAGGTACGTCTAGTTAATTTCATAACAGATCATCTATTC
TGCTCCTAAAGGGATTTGGCAAATGTGCCGATCTAACTTGGTTGTCTGTC
AAAACAATTAAAACTACGTTGCTTTTTGGTTTTAATGATTATAAGATTGA
CATATGATTTTGGTGTGATTGCTTTGCTTTAGCCAATAACTGCGCACAAA
ATCTCATTCCGCAAACATGAGCAAATTATTTTATGGAACCATGCCCTTTA
GAGTGAATACTTGCCATGCCATGCGTTGAGTAGTAGAATCTGCTCAGAGA
CTAATGTCTAGTTGACCTCTAATTTCTAACGTATTTTGATGGTCTAAAAT
AGACGTTACTGCTTAGAAAAATAGCCTTGACGTTTTAAATATAGGCAAGT
TATTCATCAGTAGTCATTATCATCTGCNGTTGATCTCtaatttctaatat
ttttttggtTCATGGTCTAGAATAGACGTTACTACTTAAAAAATCATTAT
CGTCTACAGGTCTTCAACTGGAGTTTCCAGAAGATCCTATTACGAAACTT
TCAGACGCCATACGGTACAGCATCAACACACCTGGAATGACTTTAtatga
aaagttgaaagaaaaggaagaacAGTTTGCTTACCTACGTGTAACACTTG
GGCCTGACCGCCGTACCGCACCTGGTATTCCCTATGTTCTAGAGATCTGG
CCTTCAGGTAAGGAGATTTGATTATGTCCGGCATTGACTAGTTTACTGTa
gtattaccttaagggaattaattttcgcgggacttattttcACGACTAAC
TTCGACTgtaaattttcgcgaggatttaatttcgcgaattgacgaatttt
ttcagattttcagatttttccttAGTTTGATTACGAGATTTTGTGTGTTT
AGTAGAGTCTTATATCTTCATAactgaataaaaatttattcgaattacag
agacatTCGAGAGTCATTTAAGAGAGTTTCCATTAGATCAAAAAACTTAG
AATTTTTAgcgtaaaaaaattaattttcgagaggatcaaattttgcgaat
ttagCGAGAGAtgagagtttgaaaattttcgcgagagattatatttcgcg
aaaaagttgaaattcgcgaaaattcgcgaaatataatccccgcgaaaatt
tattcccttaaggtaccatgtttgtaatttttgatagaAAGATCGGGGAC
CGCCATAGAGCTTGGTGTATGTGGTTTATACTATGATTTTCATTACATGG
TATAATTATTTTGATGTATCCCTCTAACAACCCTAACTCCACAATGGGAT
TTGGTTTAGGCCTACCAGGGTCCAATGTCTGTCTTTGTGAGCACGTTAAA
TGTACTATGTACCAGTGTATCTCTCGCAGTACCTCTAcggcaataaattt
tgaaattagccgtagatatcgggtctgtaTTTAGACTAATGTTAACGCAA
TTACACCAGACATTACAAGTCAATTCTGCCATGCACTTTTTCAAATTATA
CGCTCAtatgttttcttcttttatattaCTAATTGCGAAATTAGCATGAT
CAGGGAATTGTCCAGGGTTGATGAATCTATATTTTCTTTCTCAGGAAAAG
GAAGCCCTATCCATAATCATGGAGGAGCATGTGCAATAATTAAAGTGCTA
TTTGGTAGAATCACTTGCAACATCTACAACAAGATCACACAGCCACCGGA
ACAAACAGAAATGCAACCTTTGACCAGATTTGATCTCAATGAAGAGCAAA
TGACCTGGATAGGCCCCAACTGGTATCAAACGCATCGCTTACACAACAAC
ACTGATGATTTCTGCGCAACCATACAATGCTATCGATATGACTTCAATGA
TGCAATTCACTGGCCCAATTTCGATTATGTGGGTTTTGTAGAAGACAAAG
AAAAATACGAGTTGGAAGAATTCTATCCAGATAGCGATTTCACGTTCGTT
AATTTGAGACGAACTGTTCTTGACGAGtttcaaaaattcttagaaGGATG
AGTTATGATTTTAACTTTCCTGCAAAGATTGCAGTGCTTTcaagtaaata
aatattttgttagCGTTTTTTTTTCACAGTAAACAGTAAACCATGTTACA
TTTTAAAACGTTATACTGTTGAACCCCCATGTAATTTGTATTTAATAAAT
TGAAAGACCTATGTGTGAATCGAAAAAAAACTTGATAATTTCacaattaa
aa

Coding sequence (CDS) from alignment at sc0000010:596005..604106+

>TCONS_00001357 ID=TCONS_00001357|Name=TCONS_00001357|organism=Clytia hemisphaerica|type=CDS|length=6525bp|location=Sequence derived from alignment at sc0000010:596005..604106+ (Clytia hemisphaerica)
ATGCCTCAAAGAAGGACTGCTGTCTTCCCCGTAAACGGTCAAGGGACTCT
AGTCTATACCGTTCGTAAAAAGAGTCAATTCACCATCTACATAACACCTG
ACAAACAAAAGGTACCAAAAAGCTTGGATTTTGATAGTGAATTCTCAGAG
TTTGAAGAGGAGCAAAGTTTTGATACGGAGAACTACATCTCGTTGACTGT
TGGTGAGAATTTTGCACGTTTCAAACTGAAGATGCATAAAGATGATGAAG
AGAGAGTGTTGAAAGAAGAATATGGGAAAAATATTGGAATTGAACCTAAA
GAACTGGTCAGTTATTGGTTCAGTTATGACCGCGATGCACTGACCTTGAA
ATACGGCAAAGGGCACGTTATGACTCAAACAACACTATTAGAGTTCCCTT
TCTTGGAAGGCAAATCGAAAGGCGAAGAAGAGCACATTCGAAAGAAGTAC
AATATTTTCTTCAATGCAGaAGAGAAAAAATACGTGGTTGCCGAATCGGA
GAAAATGGTGGAGGACGTGACAGGAGGACTGGTCAAAATCGAACAGACGT
TACAATTCTATCCCAACCCTCTCGTGACTAATTTCTCACCTATCGTTAAA
GATAGCTCGAAAGTCACTTTGTTCGATCTTGATCGAGATCAATTCATGTT
TTCAAGTAGCCTACCACCTGCCTGTAAAGAACTCTACGATAATATCAAAG
GTCTTCAACTGGAGTTTCCAGAAGATCCTATTACGAAACTTTCAGACGCC
ATACGGTACAGCATCAACACACCTGGAATGACTTTAtatgaaaagttgaa
agaaaaggaagaacAGTTTGCTTACCTACGTGTAACACTTGGGCCTGACC
GCCGTACCGCACCTGGTATTCCCTATGTTCTAGAGATCTGGCCTTCAGGA
AAAGGAAGCCCTATCCATAATCATGGAGGAGCATGTGCAATAATTAAAGT
GCTATTTGGTAGAATCACTTGCAACATCTACAACAAGATCACACAGCCAC
CGGAACAAACAGAAATGCAACCTTTGACCAGATTTGATCTCAATGAAGAG
CAAATGACCTGGATAGGCCCCAACTGGTATCAAACGCATCGCTTACACAA
CAACACTGATGATTTCTGCGCAACCATACAATGCTATCGATATGACTTCA
ATGATGCAATTCACTGGCCCAATTTCGATTATGTGGGTTTTGTAGAAGAC
AAAGAAAAATACGAGTTGGAAGAATTCTATCCAGATAGCGATTTCACGTT
CGTTAATTTGAGACGAACTGTTCTTGACGAGtttcaaaaattcttagaaG
GATGAATGCCTCAAAGAAGGACTGCTGTCTTCCCCGTAAACGGTCAAGGG
ACTCTAGTCTATACCGTTCGTAAAAAGAGTCAATTCACCATCTACATAAC
ACCTGACAAACAAAAGGTACCAAAAAGCTTGGATTTTGATAGTGAATTCT
CAGAGTTTGAAGAGGAGCAAAGTTTTGATACGGAGAACTACATCTCGTTG
ACTGTTGGTGAGAATTTTGCACGTTTCAAACTGAAGATGCATAAAGATGA
TGAAGAGAGAGTGTTGAAAGAAGAATATGGGAAAAATATTGGAATTGAAC
CTAAAGAACTGGTCAGTTATTGGTTCAGTTATGACCGCGATGCACTGACC
TTGAAATACGGCAAAGGGCACGTTATGACTCAAACAACACTATTAGAGTT
CCCTTTCTTGGAAGGCAAATCGAAAGGCGAAGAAGAGCACATTCGAAAGA
AGTACAATATTTTCTTCAATGCAGaAGAGAAAAAATACGTGGTTGCCGAA
TCGGAGAAAATGGTGGAGGACGTGACAGGAGGACTGGTCAAAATCGAACA
GACGTTACAATTCTATCCCAACCCTCTCGTGACTAATTTCTCACCTATCG
TTAAAGATAGCTCGAAAGTCACTTTGTTCGATCTTGATCGAGATCAATTC
ATGTTTTCAAGTAGCCTACCACCTGCCTGTAAAGAACTCTACGATAATAT
CAAAGGTCTTCAACTGGAGTTTCCAGAAGATCCTATTACGAAACTTTCAG
ACGCCATACGGTACAGCATCAACACACCTGGAATGACTTTAtatgaaaag
ttgaaagaaaaggaagaacAGTTTGCTTACCTACGTGTAACACTTGGGCC
TGACCGCCGTACCGCACCTGGTATTCCCTATGTTCTAGAGATCTGGCCTT
CAGGAAAAGGAAGCCCTATCCATAATCATGGAGGAGCATGTGCAATAATT
AAAGTGCTATTTGGTAGAATCACTTGCAACATCTACAACAAGATCACACA
GCCACCGGAACAAACAGAAATGCAACCTTTGACCAGATTTGATCTCAATG
AAGAGCAAATGACCTGGATAGGCCCCAACTGGTATCAAACGCATCGCTTA
CACAACAACACTGATGATTTCTGCGCAACCATACAATGCTATCGATATGA
CTTCAATGATGCAATTCACTGGCCCAATTTCGATTATGTGGGTTTTGTAG
AAGACAAAGAAAAATACGAGTTGGAAGAATTCTATCCAGATAGCGATTTC
ACGTTCGTTAATTTGAGACGAACTGTTCTTGACGAGtttcaaaaattctt
agaaGGATGAATGCCTCAAAGAAGGACTGCTGTCTTCCCCGTAAACGGTC
AAGGGACTCTAGTCTATACCGTTCGTAAAAAGAGTCAATTCACCATCTAC
ATAACACCTGACAAACAAAAGGTACCAAAAAGCTTGGATTTTGATAGTGA
ATTCTCAGAGTTTGAAGAGGAGCAAAGTTTTGATACGGAGAACTACATCT
CGTTGACTGTTGGTGAGAATTTTGCACGTTTCAAACTGAAGATGCATAAA
GATGATGAAGAGAGAGTGTTGAAAGAAGAATATGGGAAAAATATTGGAAT
TGAACCTAAAGAACTGGTCAGTTATTGGTTCAGTTATGACCGCGATGCAC
TGACCTTGAAATACGGCAAAGGGCACGTTATGACTCAAACAACACTATTA
GAGTTCCCTTTCTTGGAAGGCAAATCGAAAGGCGAAGAAGAGCACATTCG
AAAGAAGTACAATATTTTCTTCAATGCAGaAGAGAAAAAATACGTGGTTG
CCGAATCGGAGAAAATGGTGGAGGACGTGACAGGAGGACTGGTCAAAATC
GAACAGACGTTACAATTCTATCCCAACCCTCTCGTGACTAATTTCTCACC
TATCGTTAAAGATAGCTCGAAAGTCACTTTGTTCGATCTTGATCGAGATC
AATTCATGTTTTCAAGTAGCCTACCACCTGCCTGTAAAGAACTCTACGAT
AATATCAAAGGTCTTCAACTGGAGTTTCCAGAAGATCCTATTACGAAACT
TTCAGACGCCATACGGTACAGCATCAACACACCTGGAATGACTTTAtatg
aaaagttgaaagaaaaggaagaacAGTTTGCTTACCTACGTGTAACACTT
GGGCCTGACCGCCGTACCGCACCTGGTATTCCCTATGTTCTAGAGATCTG
GCCTTCAGGAAAAGGAAGCCCTATCCATAATCATGGAGGAGCATGTGCAA
TAATTAAAGTGCTATTTGGTAGAATCACTTGCAACATCTACAACAAGATC
ACACAGCCACCGGAACAAACAGAAATGCAACCTTTGACCAGATTTGATCT
CAATGAAGAGCAAATGACCTGGATAGGCCCCAACTGGTATCAAACGCATC
GCTTACACAACAACACTGATGATTTCTGCGCAACCATACAATGCTATCGA
TATGACTTCAATGATGCAATTCACTGGCCCAATTTCGATTATGTGGGTTT
TGTAGAAGACAAAGAAAAATACGAGTTGGAAGAATTCTATCCAGATAGCG
ATTTCACGTTCGTTAATTTGAGACGAACTGTTCTTGACGAGtttcaaaaa
ttcttagaaGGATGAATGCCTCAAAGAAGGACTGCTGTCTTCCCCGTAAA
CGGTCAAGGGACTCTAGTCTATACCGTTCGTAAAAAGAGTCAATTCACCA
TCTACATAACACCTGACAAACAAAAGGTACCAAAAAGCTTGGATTTTGAT
AGTGAATTCTCAGAGTTTGAAGAGGAGCAAAGTTTTGATACGGAGAACTA
CATCTCGTTGACTGTTGGTGAGAATTTTGCACGTTTCAAACTGAAGATGC
ATAAAGATGATGAAGAGAGAGTGTTGAAAGAAGAATATGGGAAAAATATT
GGAATTGAACCTAAAGAACTGGTCAGTTATTGGTTCAGTTATGACCGCGA
TGCACTGACCTTGAAATACGGCAAAGGGCACGTTATGACTCAAACAACAC
TATTAGAGTTCCCTTTCTTGGAAGGCAAATCGAAAGGCGAAGAAGAGCAC
ATTCGAAAGAAGTACAATATTTTCTTCAATGCAGaAGAGAAAAAATACGT
GGTTGCCGAATCGGAGAAAATGGTGGAGGACGTGACAGGAGGACTGGTCA
AAATCGAACAGACGTTACAATTCTATCCCAACCCTCTCGTGACTAATTTC
TCACCTATCGTTAAAGATAGCTCGAAAGTCACTTTGTTCGATCTTGATCG
AGATCAATTCATGTTTTCAAGTAGCCTACCACCTGCCTGTAAAGAACTCT
ACGATAATATCAAAGGTCTTCAACTGGAGTTTCCAGAAGATCCTATTACG
AAACTTTCAGACGCCATACGGTACAGCATCAACACACCTGGAATGACTTT
AtatgaaaagttgaaagaaaaggaagaacAGTTTGCTTACCTACGTGTAA
CACTTGGGCCTGACCGCCGTACCGCACCTGGTATTCCCTATGTTCTAGAG
ATCTGGCCTTCAGGAAAAGGAAGCCCTATCCATAATCATGGAGGAGCATG
TGCAATAATTAAAGTGCTATTTGGTAGAATCACTTGCAACATCTACAACA
AGATCACACAGCCACCGGAACAAACAGAAATGCAACCTTTGACCAGATTT
GATCTCAATGAAGAGCAAATGACCTGGATAGGCCCCAACTGGTATCAAAC
GCATCGCTTACACAACAACACTGATGATTTCTGCGCAACCATACAATGCT
ATCGATATGACTTCAATGATGCAATTCACTGGCCCAATTTCGATTATGTG
GGTTTTGTAGAAGACAAAGAAAAATACGAGTTGGAAGAATTCTATCCAGA
TAGCGATTTCACGTTCGTTAATTTGAGACGAACTGTTCTTGACGAGtttc
aaaaattcttagaaGGATGAATGCCTCAAAGAAGGACTGCTGTCTTCCCC
GTAAACGGTCAAGGGACTCTAGTCTATACCGTTCGTAAAAAGAGTCAATT
CACCATCTACATAACACCTGACAAACAAAAGGTACCAAAAAGCTTGGATT
TTGATAGTGAATTCTCAGAGTTTGAAGAGGAGCAAAGTTTTGATACGGAG
AACTACATCTCGTTGACTGTTGGTGAGAATTTTGCACGTTTCAAACTGAA
GATGCATAAAGATGATGAAGAGAGAGTGTTGAAAGAAGAATATGGGAAAA
ATATTGGAATTGAACCTAAAGAACTGGTCAGTTATTGGTTCAGTTATGAC
CGCGATGCACTGACCTTGAAATACGGCAAAGGGCACGTTATGACTCAAAC
AACACTATTAGAGTTCCCTTTCTTGGAAGGCAAATCGAAAGGCGAAGAAG
AGCACATTCGAAAGAAGTACAATATTTTCTTCAATGCAGaAGAGAAAAAA
TACGTGGTTGCCGAATCGGAGAAAATGGTGGAGGACGTGACAGGAGGACT
GGTCAAAATCGAACAGACGTTACAATTCTATCCCAACCCTCTCGTGACTA
ATTTCTCACCTATCGTTAAAGATAGCTCGAAAGTCACTTTGTTCGATCTT
GATCGAGATCAATTCATGTTTTCAAGTAGCCTACCACCTGCCTGTAAAGA
ACTCTACGATAATATCAAAGGTCTTCAACTGGAGTTTCCAGAAGATCCTA
TTACGAAACTTTCAGACGCCATACGGTACAGCATCAACACACCTGGAATG
ACTTTAtatgaaaagttgaaagaaaaggaagaacAGTTTGCTTACCTACG
TGTAACACTTGGGCCTGACCGCCGTACCGCACCTGGTATTCCCTATGTTC
TAGAGATCTGGCCTTCAGGAAAAGGAAGCCCTATCCATAATCATGGAGGA
GCATGTGCAATAATTAAAGTGCTATTTGGTAGAATCACTTGCAACATCTA
CAACAAGATCACACAGCCACCGGAACAAACAGAAATGCAACCTTTGACCA
GATTTGATCTCAATGAAGAGCAAATGACCTGGATAGGCCCCAACTGGTAT
CAAACGCATCGCTTACACAACAACACTGATGATTTCTGCGCAACCATACA
ATGCTATCGATATGACTTCAATGATGCAATTCACTGGCCCAATTTCGATT
ATGTGGGTTTTGTAGAAGACAAAGAAAAATACGAGTTGGAAGAATTCTAT
CCAGATAGCGATTTCACGTTCGTTAATTTGAGACGAACTGTTCTTGACGA
GtttcaaaaattcttagaaGGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000729XLOC_000729Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001357-exon-sc0000010-1491911889:596005..596555TCONS_00001357-exon-sc0000010-1491911889:596005..596555Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1510915933:596005..596555TCONS_00001357-exon-sc0000010-1510915933:596005..596555Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1575043694:596005..596555TCONS_00001357-exon-sc0000010-1575043694:596005..596555Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1491911889:601064..601226TCONS_00001357-exon-sc0000010-1491911889:601064..601226Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1510915933:601064..601226TCONS_00001357-exon-sc0000010-1510915933:601064..601226Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1575043694:601064..601226TCONS_00001357-exon-sc0000010-1575043694:601064..601226Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1491911889:601688..601918TCONS_00001357-exon-sc0000010-1491911889:601688..601918Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1510915933:601688..601918TCONS_00001357-exon-sc0000010-1510915933:601688..601918Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1575043694:601688..601918TCONS_00001357-exon-sc0000010-1575043694:601688..601918Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1491911889:602414..602611TCONS_00001357-exon-sc0000010-1491911889:602414..602611Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1510915933:602414..602611TCONS_00001357-exon-sc0000010-1510915933:602414..602611Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1575043694:602414..602611TCONS_00001357-exon-sc0000010-1575043694:602414..602611Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1491911889:603499..604106TCONS_00001357-exon-sc0000010-1491911889:603499..604106Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1510915933:603499..604106TCONS_00001357-exon-sc0000010-1510915933:603499..604106Clytia hemisphaericaexon
TCONS_00001357-exon-sc0000010-1575043694:603499..604106TCONS_00001357-exon-sc0000010-1575043694:603499..604106Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001357-proteinTCONS_00001357-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:596005..604106 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.184388	0.158498	0.158014	0	0.061426	0.0682345	0.305352	0	1.28064	2.51655	0.694241	0.645634	0.196377	0.277054	0.933245	0.113605	7.2298	3.79402	5.06967	5.12478	0.502456	0.383428	1.34721	3.86389	12.6346	26.0144	2.34692	5.44948	17.7972	9.55534
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001357 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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