XLOC_045742 (gene) - C. hemisphaerica

Overview
NameXLOC_045742
Unique NameXLOC_045742
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_97:490062..496944+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045742 ID=XLOC_045742|Name=XLOC_045742|organism=Clytia hemisphaerica|type=gene|length=6883bp|location=Sequence derived from alignment at scaffold_97:490062..496944+ (Clytia hemisphaerica)
GTCGGAATGTTGCGATTTCATTGTTTGCCTATCGTTTTATTCATCTTACA GCTTATTACTGCTGAAGATGATATCCATGACATCATTGAAAGATCCTcga aatctgattggctaatcaACCCTAAACATGACGTCATTAGTGAAAATACA GTATCTGATTGGTCAGATTCTACCAATGATGATGAAGAAATTGTGAATGG TCAATGGTGGTCCTCCGGCAGACTTGGTATTATTATtatctttcactttt tttcattttttatgtgaATTGAGAAGAAAGTACCTTTTTATGTAACTTTG ACATCTCTCCTTGGCaacttgagatttttttttatgacCTTGTACCTGGA GCCACTTGTACCAATCTTTTTTTTAGCGGCcgtagctcagtggtagagct cccctaccttcaggtggatagctatcgaaaagggggccttcgggtcgcct ccgactgtggtCTTACTTACATTGAAGAAAATTATACTTCAtattgcctg aagattgtcaccAAAGTGACATGAAACTGTCAGTACAATCAgggtcgaaa tatattgggaattttggttaattcctcgtttttagcaatttaaagttcgg gcgaaaaagtcgcttttgggcaaattgataaatttattcgaatatttcga tTCGGATgaggtttatagacttccaggctacattctgagccctattggac cattcttgcaACTTTTAGTTCTtcagatcctaagctcctaagtcttaagt ctacaatcatccactaaatatttgagacaaaggggatttcccggtgtaat tttgaacaccaaaattgatttttaagcgccttaaactacagttggaaagt agagttttaactctgagttttaacatgagacttaaagacttaggacctta ggatctcaggatttaaaagctcaaatttgctcgaatgaggcttggaatat agcctagaagccaccaaacccctataaaatcgaaatattcaatggaaaaa agtggaagtgctaaaatagcaattctcgcccgaactttaaattctgaaaa acgttgaaatacactaaaatctcaatatatttcgagggagattgtagcat taaaactctacccgtccaacctaatttagagcgctaccaaatcgtttgtg gttataagatttcgtgggaatttctcttttttctcaaatatgactttgat tgtagcAATATAAAAGTGACTTTTCTTCATGACTGACATCGCACTACTTA TATTTCGGGCACtgtaaaaactgaaaaattactTACTTCTATCTCTAAAT CTGTCTAGTTCGCAAAGGCAAACGTTCAACACTGGAACGAAAAGATGTAC AGCATGCCCAAAAGGACGAAAAGGAagattttgattggtcgaatgATGAG GAATACGTTCAAAGTCACAGCATCGAGAAACGAAATTATTGGAGAAGAAG ACGACGGAGGAGGTGGAGTAGATTTGCCAGAGCTGGTGATGGTGAGAATT Tttcacacaacgttgtttcaacgttcatctaacgttatatggacgttgtg aacgtaagataaacgtcgaaaaaacgttgtgtacCGGCTGGGTTTATGCT ATAATTGAAGAACATTTCTTGGAAAGGTTGAGCTCTTCGTTCgtgttttc atgaaaaaaaatttatcatgaAAATAAATCAGTCGTACTATATCAACATG AAatggaaactaattttctttaatttttgtgatcaatttttgaatttttt tgtgattctttcgatttttggtgattttgttgGGATTATTGGTGATTATT TTGAAAAGCGTACGTGATTTTTCCGAGTAATTTGACCTCTCGACGGAAAT AAGCCAACGTGAAAATCTTGAGCTTGTACTTTTGGCAGATTTgaaatcaa attgaaattaaatgacaaattactttaggcgtacaaactttcgcgaatta ccctgtcaagaattttcaaagacattacAACATTAACTTTCGCGGAAAAG GCCAAAATGCgggaaaattcgcgaaattttctactcgcgaaagtttttac GCCTAAAGTCAATCCCGAAATTTCAGTTCTCCACGGGAATAAGGCGggtt cgtggaggtcaaaattcttgcaacgttacaaataattttcagaagctcat tttgggctcaaacaaagcgtatgactaagtagaataggattcagtctagg cagatgttttttcactttgaaattttgcgtaattNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNaaaaaatttatgaaatttgatgacgtcatcacttttaaggcaaa aagctaaaatcctcaaaaaatgctgacatcatcaagattttgaaaatttt tgaaaatcttttgaaaatttgcatctgcctagactgaatcctaTTCTACT TAGTCATACGCTTTGTTTGAGCCCgaaatgagcttctgaaaatgatttgt aacgttgcaagcattttgaccccgccttaatcccctTGAGTTTGCGTAAA TCTATccaattaattaaaaaataatctaatAATTTAGAATATTCAAATTG TTACACCTGgtgttaatagattagtatcgCGAAAATTAATGGCCAAATAC AAATTTAACTGAAATTCTTTATGTTCTTATGTGAGTTTATTTTAGAAAAC TGGTCTCAGCTGGCACAAAAcgctgtttcaacgttaatctaacgttatat atatggacgttgtgaatgttgGATAAACGTTAAATCAATGTGGTGAGCCA GCTGGCgttcttatttttactttgAGTTGTTGATATCTCTTCTTCTTTTC TCCAGAGCCTCTAATGGAAAGCCATGACAACCAGCAAAACAATTCAACGT TGGAAACAGTGGAAGTAGAAGCAGGCGAAATGACCGGTCCCGAGAACATG GGTGAaagaaaaagtgacaaaattacCGGATCCGAAAATTCAACCTTACA GAAAGAAGCCGCCTCTATAGGTTACAACCAACCTACCGAAAATACTGATA CAAGAAAACACCAGTGGTATGGTGGTCATGAAGGGTGGAATGGTGGTACT TTGGGGCGGTGGCGTGAAAGCGGTGAGTTTTTtctacattaaaggaagaa attttggcgggaatttattttggcggaCTATGAGTTTCAAGGTTCGAAAT CAgtgtgaaaatgttaaaaaaatacgCCCATTTAGATAAATAGTGAAAAA TCGAAAGAAATATGAGAAAACTTAAGTTTggcagggatttaatttggcgg atggtggaaaagaaaaatttggcgggaagaaaatttggcggattttgccg aaatcttcctttaatgtacttATTCCGACTTTGAGACCCTTTCATTGCAT GATGAATCATGTTatctgttgaaaaaaaattacgagacAATAAGTTCCTT TCAGTATCACTGGgtgaaataagagatttccaatcctgggaatatcttga aaatatgatatttccatatacttttgtaaatatggaaatatgactttttt atatttccaaagttgtggaaataccatatttcatgatatttctaaatctg aaatatcatattttcaaaatatttccagcttttggaaatatgatatttcc aaaaattggaaatctattgatgcaaattacccgacttcacggtaagGAAC TTCCAAATTattacaaaatatattttgcaaAACGCCGACAATTGTTTTTA ATAATTCATGTATAGCTGAACAGAAGCTATTACCAAGAGGATTCCGAAAA AAAGTTGtgccaaaaatttaaaataatccTGACTCAAGACATCAGCAAAA GATTGATATTTAAGTTAAAAAGTccgtcgaaaaaaaaacacgtcaaaata ATGGTTTCAATAGCGTCACTAAAGAAAAACACCGATAATTTTATATCCAG TTCAGAAATCGAAGccaaattttgactgggatGGTAATTAATGATTCTAa gaaattcaattaaaaaaatttcaaaaaaaattgctgAAATCCCAGCATTT TATgaggtttttaaatttttgtcgaCATAATAACGACGtggtcaaaattt gataaaaatgatttgataaaaatgatatgttcgagaaagtcgtttttgag ctaattgataaatttattcgactatttcaattcgggaggggtttatttac ttccaggctatattctgagcctaaGTGGaacaattttgaacttttagatc ctgagatcctaaggtcttaagtctagcgttaaaactcaaagtaaaaatct acccttccaacctaatttagagcgcttccaaattgtttgtggttataaga tttcgtgggaatttcccttttttctcaaatatcatGACTTTGATTGTATA CATGACCAACAAAAAACGATGGGAACCGGTCGGTGTCACGCctaaggggc cgtccatatagtacgtacgcaaagattttccaaaattttgataccccctc ccccccttgtacgcagagaacaatagaaatgacgtcaCTCAAACAATAGA TGTatgcttttgctaaacccctctccccccttcactgcgtacgtactata tggatggcccctaaTAAGATAGTTTTTGAGCATTCCTTAAACTAACCTTA ACTAACAGTCCACAATTTAGTATTGTTGAAAATTGCCTCCTCATGTACCG TAGACAAGAGACAGATTTAGAATTACGGGAAATTCGAATCAAGTGCTGTC CTTGctttctaaaattaaaaccaaatTTCAGAGCTTGCGTTTTCTAAGAA AATGTGACCAGTGAAAGAataacagaatttgattggctatgttttcaccc GTCATTAGGAtatgagaaattcaaactctcaacccaaaccatgctattca tttcgccatcagtatataagaGAAGAAAtaatagcatggatctccaggct atttATACAATATAGGTCGACTAATGTTTTGTATCGGGTACTATGACTCA TCAGCGACGGAGAGTCTCCGTATTCTTATAAGGAGTATGGCTAAAAGGAA CACTCTCCGTCTGAATTTTCTAATCTTCCTTAGATTCGCCATTACTTAGT ATTGGACTTTCTGGGAATGATTCCTTTTATAATATATTGGTATTCCTcca tatcattttcattttcatccatCGACTTTTTGAACCAGGTACGACTTTTT GAACCCGGTAATAGAAAGACTGCAGTGGTATGAATAAAAGATAAACACTC TCTGTCGTGAATTTTGAATGCTCCTTAGATTCAGATCTGCCACTGCTCAG TAACGGCCTTTCTGCGTGTTATTAATTCAATGCGAATGCCAAGATCCAAT GTTTGTGATAATCATAGaattttcttaatctttattCTTGAAAGCACATT TTTATGATGAAAAGCTTATAACCCATTGTATCGATATTTCTAGAAGAAAT TCAAAAGGCTGCAGATAACGAAAATGTAGATATTAACCTTGAAAGCGATC AAACACACGGAACCGGAAACGAAGAAATGAGCTTCGAAACACACGAtatc gaaaatgaagaaataagtGATAAAACACACGGTACCGAAAAACGAGGTGG GAATTGTTGGAGGAGACGATGGTGTTGGAGAAAGATGGCAAGAATAATGA TTATAAATGACGGTAAATTAACTCTTTCTAATCCTCTTACGCGATCATCA ATTCACAATTTGTGATAtaaatgatgtaatgttttatacggaagcaacCA ATAAAGACTGGTCTAGTTAAATAAGCCTATATTCACAAGTctaggacaca cggctaatGGCATTTTATGTGCAGCCCGACTTTTAACCCTCGGACCTTTA GCGGgactaaaaaaatttttgcgatttttatgaccgttattgggactaat tagaccaaattttgatctttcaaggagcAAAAAGTTAATATTATATAaag ttaaaatattcttatttttccgacccttagttggactaaaatttaatttt ctggttaaataccccccccccggctgtaacccttttcaactttcaacttt actttttatACTGCTTATCAaccaaaaatatctaaaaaacaaTGGACGAA Tatccaaaaaaagttgaagccttttgatgttcttaactttttgagtttta agcctaaaaattttcttaacatgttattattttcacgattttatgAGTgt gttttcaaggtttttgtccattttcttaagaaatcgggtgttttagagcc tgcaaacccttaaaatgttcttaacttgtttttaatattttggccattga agccttacgttcttgtatagtttgttctgcCTTTACAAGTTGTTTGGTAA TTTATCATGTCAAGAATATACTTATCAaccaaaaatatctaaaaaactaT GGACGAATatccaaaaaaattgaagtctttggatgttcttaactttttga gttttaagccttaaaatgttcttaacatgctcttattttaACCAGTTTAT gaatatctttgtttattttcatcttaagaaatcaggtgttttagagcaTG CCaacccttaaaatgttcttaacttgttcttaatattttggccatcgaag cctatgttcttgtatagtttgttctggtataaaaaacgtgtacaagtCTA ACTTCCTGTTATTTTTAGGAGATGAAATTTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073665TCONS_00073665Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073665-proteinTCONS_00073665-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:490062..496944 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19 0.55 0.11 0.21 0.13 0 14.64 16.97 32.02 29.63 24.97 29.6 0.5 0.32 1.27 0.74 0.28 0.36 1.59 1.04 0.09 0 0.11 0 0 0.18 0.13 0 0.1 0.21