XLOC_045587 (gene) - C. hemisphaerica

Overview
NameXLOC_045587
Unique NameXLOC_045587
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_92:222730..225947+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045587 ID=XLOC_045587|Name=XLOC_045587|organism=Clytia hemisphaerica|type=gene|length=3218bp|location=Sequence derived from alignment at scaffold_92:222730..225947+ (Clytia hemisphaerica)
TCGCTaaccgctatattttcttaatgattgtttttctccttattgctatc
taagtttcatcatcaggtaggtccattcagcatgttgcttgttttttctT
GTCGTAGGTTGGGTTCATCACCTGACAGCATATTACCGTTCGAAGCCTTA
TTAACGTTGGAGGAACAGCCACTTGTTTGACAACCTGAATACAATGCACA
AATCCCGTTTTGTTAGCGGTGAAGAAAAATATACAGGTATACTAAAATTT
CTACTCTCTTATTAATTGCAAGGGCTGGAAATCTCTTAATACGCTTGTCC
TCCTTCGGGTTGTGGGTTTTCTATGGTATCGCCCTTAAATTTATCACTTG
TACAACAAATAACAAAGGTTTTTTGAAGCTCAGTATGATATTTCAAGTTT
GTGTTGACCACTAAAACGATTCTCATTGGGTTAACTTtaactttttcaac
caatcaatgcaaatgttttaaaaagattgCATGacttgtttttgtcattt
tttgttttgtctgaaagttgaaattgaatttttagggataggaaagaaaa
agaaaccgCAAAGTGATAAAGGATATAGCAGTGTACattctcctttttgt
ttttAGTATGAGCCTTGTTTACTTACATAAACactgttgtttttttgtta
GAAAGTAGACGTCAAAGGCTCGGTCCCAGACCTCAAGACATCAgcacttg
atgacgtcattaataGTATAAATATGGCACGATTTAGAAGAAGTATCTTC
AGTATACAGTTGTGAAGAGCAAGAACAAACCAACGGTTCTGAAGTGATAT
TTAAGTGCTACGATCAAGAATAGCCGTTTATCATCTATAAAAAGGTATAT
ACAGTAATAATTTATTGCTTTTATTCAAGACCTATAACTCAGTTTTACAT
ACATGTGATTGACAAGCATGTATTAAAGGCTTCTTAAAGGGTAAGCTTCA
TTAAAGAGTCAAAATAAGATGAGCTCCCCTCTTGCAagcttttctgtttt
tcttgTATTTATAATTTGCGGAAGAGATTATTTCTTCGACGCAACTTCTA
CTTTTACTAAATTAATCTATGGCACACCTAGACCTCAGCTTCTCTGTTTC
ACGTTTAAGGTAATCCAGTCTTGTAATGGGTTTGATGTGAATTAGAATTA
TCAATATTTGGATTTAAAAATTGNGTAATCCAGTCTTGTAATGGGTTTGA
TGTGAATTAGAATGATCAATATTtggatttaaaaattgaaattcaatatt
ttaatggtttttttttcaaactcgtTCATTCATTCAAACATTTAATGTCT
TTcgtcaaaatgcaaaaataatagCACCACCAAATTGAACATTTTTACTG
TAAAATGGGTAGATTTTTAGTCATTAATCACTGAGATAGTGGAGGTTCCA
TAAGTTACGTTTCCAAACAAGTTCCATCGTCACTCGGATTCCCAGTAGCA
ATTTGCGTCATCTCTTGCCTATTTGCGAAAGTAATTCTAAtgaatttatg
caaataaatatatagaaataCTCCAGTAACGGATATTCAACTAACAAAAA
ATCCAGAATATTCTCAGACTATTGAAACCCAGGCCTCGTTACCGTTCCAG
AAGgaaacagtaacgtgtgaataTAGTCTTAAATGATGTTAAAACATTGC
AATATTGCTTCAGAAGTAGATGACTTCATTTAAATTATTTGACGTAATAT
TTCATTCGCGTTAAGcgacttttaatttttttcaaaaacacattTGTTTG
ATACTGCACGGGGAAGGGGCACGGCTAACATACTGTTTTTATTTGACGAA
CTTTAAAGTATGATAAATTTCTTTATTAAGCTttaacttttgagaaaaat
aggCGTTGGCTAGATATAAGTCTCTTGAAGTGATATGATAATgtcttttg
aaacttttcaaatttgttttttattattctaCTTCTAAAAATGTTGCATC
TACTTTGGCTGTGGTTTTtgtttgtggtttgatttgtcCAGTGGTCTGTC
ACCCCTCTCAGACGTCacttaagagaaaaaaaagtcGTAAACAACCTGAA
GTCAAATCTTTTCGGGATAAACAATTCCATTGCGTCGTCTCTTATATACA
CCAGCATTACCTGGTTGTTTGTACAAAAGAATACACCACggaatatttta
agcttgaaTACAAAGTTACACCGAGTTACTAGAATAACTAGATTGATACG
ATTACCTAATcttcatttcatttttcttttgttttcagaaaactcaaatc
aagaCCCACAAAAACACAGAAATGGCCGGAAAAGAATTATTGCTCAGTCT
TGCATTTATGTCATGTCTCGTATGTTTAACTAACAGCCGACCCGCCTCAC
ACGACCTTCTAGCAGAACACATCAAAGAACAAATTCTAACTGACATAGAA
AAAAATCCAGGCACTCATATCATGCCTACAAAAGATTTGATGAAAGAAAT
ATGTCTTGCTAAACCTTTCAACCAAACCATATACCATGACAAATGCATTC
CTAAAGTCATAGAAAATCGATTCTGTTACGGACAATGTAATTCTCTCTAT
ATACCGGAGATCAATAGAAGCGGGCACATGGCAACGTGTTTTACATGCCA
ACCGTCAAGCTCGATACACGAACTTGTTGAATTAGATTGTGTCGTTGATA
ACCGATTTCGTCAAAAAACGGTTattgttgaaaaaattattagTTGTGAA
TGTAATCAATGCAAGTAGAATGTACCAGATATTATTGTGTGTTTAATTTC
CTTTCTTTCTTCAAAAACGGCCAGCATAGCAGAGCAGTTAGGTAACCttt
caataaaataaattttactaCCTTCATCTTAACCTGCTGCACCCCTGTCT
AAAATTTCCTGCAAATAAGCTATAGTCCTGTTTCATAGttcgttttctca
aaaaatgtattttttccgGTTAGCCGGTTCGTTTTTTAACACTCCCATAT
AAATTAGAAGATACCAGTTGCATTATATCTAAATTCAAAACTGCGGTGAA
ATATTCCACAGTTTTTCGAATGCTTCCGTTTATAAATTATAATATGATGA
ATTTAATTAAATATAATAAACATTCTCTAACAAATttatatgataaaaaa
ttttgtatttatgtaaatattttaTACCCAATATTTAGCAGAAATGTGTA
TTTAGCTCAAACCATCATGtgtatttttatatgaaaagcGATAATATTAT
CTTTAAGTATAAGAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073449TCONS_00073449Clytia hemisphaericatranscript
TCONS_00073450TCONS_00073450Clytia hemisphaericatranscript
TCONS_00073451TCONS_00073451Clytia hemisphaericatranscript
TCONS_00073452TCONS_00073452Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Cerberus family proteinTCONS_00073450-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_92supercontigscaffold_92:222730..225947 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.14	3.26	2.04	2.31	1.4	1.29	2.22	2.56	2.5	2.65	2.37	4.12	27.84	21.95	14.38	18.44	27.73	17.98	5.46	10.01	16.51	14.15	11.53	11.52	11.49	4.3	3.47	2.31	2.47	2.37