XLOC_045131 (gene) - C. hemisphaerica

Overview
NameXLOC_045131
Unique NameXLOC_045131
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_82:493454..506111+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045131 ID=XLOC_045131|Name=XLOC_045131|organism=Clytia hemisphaerica|type=gene|length=12658bp|location=Sequence derived from alignment at scaffold_82:493454..506111+ (Clytia hemisphaerica)
TTATTGACTCTTGTTGACTTGAGAAAAACAGACTTAGAAACAGATTCTTG CTTGAGCATGTTTATTTGTTCAAAGTATCATATGATATCCACAAAGAAAT CTGcaacgaaaaaaaatcatatgaaAGTTAAATATCAAATACAGTTTATA AAGCTTCCTCACTGCTTACTTACTTAACCTTTCATTGAGAGAGCAATAAC TTTGAAACTCACGACTCGTGTTTGAAAAAGGAATTCAATACAAAATGGTG AGGATATTTCTTGCATTTTTAGGATATTTCATCAAGGACCtttagggaac taatttttgcgggaacttattACTAATTACTatttttcgcgggaacttat tttcgcgttTTTAGGTGTCTACCGCTAAAACTATTTCTGCGAAATGCtat tttttctataaattctcaaaaacttctaggaaaatgaaataatttcgaCA AAAAGTGGGTGTCAATCGCGAAAATTTCATTCCGCGAAatttagttccct taaggtacacgctttttataagaatatacttcaTAAGAATATAAATGATG AGATTGGCCGAAGAatcaagaatatgctaagaacaACACAatctttttat ctttaaatttgGAAATGGAACCTAGGAAAGCCATTTTTAACAGTAAGTCG CAATACTTCCACAAAATGCCGTTTTATGCTTAAGGTGTggaccattctta taaaaaagcgcgTGTGAATAGTTAAAAAGTGTTCCTAAAGTCAAGAGGTC AATAGACAATAGCAAAACtgagatgagctggagtttttacaagatacttc actgaTTGGTcattaaagtgatagagatgacgcgttctttggaaaaaata acaaatttgttttattactggttaacgaccaatcaaatcgaataagagct tgtaaaaactccagcttgtcccgcaAAAACTGAGTGATTGTTCTAAGGAC TGACTAGGACTGACTAGGGTTCAACAGAACCGAAAAGGacatttgagtca ccgtgtttgttcataaattacgtcaccagagacgcttacctcgttttcaa aatattagtatggtaattgattcccgGAAGAGTTCATAAGAAATTGACTC TATTCATAAAAGTACACTTAAAAGCTCAAGGGAtttaatcaccatggtaa tagtttcaaaaatatgtactctcgggtacctaataaaggGGTatgggttg gaataaaaatgtcctgcatggaaaaattttgaaaaggaggctaatacagc agagtTAGGGCAAAAAGAGggaactttttaaaaagactTTCCCAAAAACT AAATAGCAGGGGGGCGCTTAATAAATACCAGAAAGTAGttgttgcactca aaataatgaaaaggtCCTATTATTTCCAACTTTCCTGTAAAGATATATAG CGAATCCACTTTTGAAGGACTTGGAGTGTGAAGCTAATCTGCACTGACTT CTTAACGTGCTACTATGCTGGTGACCTTTTTCAACCCTTGATAGGTCGAT AGATTCTATCTTGACCTGTTGTTATTGTTGTGTATgatatctttttaaat ttttaattgtgACATCtcttacactctttttttaaaaagaaaatttttac aagaacaatgaTTACTTACTTTACTTTTGGTTACTTTTGGTTGTCTTCGA GCTTCATGCTCTGGCAAGAAACTTTCTGCTTCACACCACAATGCTGCATC CATCAAACCTGAATAAGGAAGGATGTCNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATCCGGgttaaaaaagctcaaaatatctcaaattgaCATAAAAGAAGAGC AGGATAACGACAATTCGAGGCTTAAAGtgcaaaatatataagaacTGTCG AGCCTCAAAAAAGCCTACAATAATGACCTCTCTAACTTTTTGCCTAAAGT CGTTGTTATAAGAATGGGGGGGGGACACTGACCTTAACGGCTGACGGGTA CGTGCCACTGGAGtgtgaaaaatggaccctgccAGATATGAATATTTGGT AAATTGTCAGAAaggaaagttgaatttttttcccattttcaccatGAAAG GCCACGAAAAGTGGCTAAAAAGACTTTCCACcctgaaaaacgtcaaaaat taccaaaagctGTACCTGTCAGATACAAATCTCAAGAATTAGTAAATTTA GGACCTTATCAGATATTTtaagagcctaaaaaagggaccctgacagTGGC ACGTCCCAGTACCCAACTTTGTCTAAGTGCACCACCCAGGCATTCGGACA AAACGATATGCTTGGAGCTCATAATTTGAaggttttaagaatttttgGAA GTTGTGGCTGTTTGGTTTCTTATAGAAGCGAAAATTGAGTTTTTGTTACG TTGAGCACGATGTAATTACAATCTGGAAGCAATAACTTTCTTCAATTATC GAAAATGACACATTAATTAACAATATTAAATTTATTGctcttttcaacca atcagactGTAGAGAATAAATAGTTTCCTAATGAGGCCATACCTACTTTT TGAAGATATGAGTGAATTTGTTTTTAACAACACAAGGAAGAAAGCTAGGC GTTGATTAAGACCTTCATTAGACTTTGCTTCGAAAGATCTTTTCAAAATC GTCTACTTTTTGttcattcattttcttcttcaacaaAACTATGGTAAGTA ATCATCATCTACACttgaacacccccttctcacagacctggtaggtGTTC ACAGCCGATGGGGataaaataacggactgaaaatcggtggggattgatat tcccatggaATATGGGAATTGggtggggatttgaattccattgttttcaa gtgaGAAAATTCAATGAAGATAGAAGAAATAGCACAACATTTTGCGGTGA GGATTTGTTGTTTGATTATTTCCAACAGGGAAAAAACAAGAGTACGATTT TACACTGGaacaattttttggccaatcttTTCAGTTGGAGGGATTACCAC AagttctgtgagaaggggtatACTTGACTCCCTCTTACCAAGTTCgatct tcaaaataaagaactaagaaactttcaaaattataGAAACGTTAGATAat ctggaaaggcttatgatgacgtcatcacaaaactttcaacctccataact tttaataggaagattttcaaggcatgttttatacctcaattttcatcagc atttcatgctctttccgctgaaactatcagattttgaatattttcaaaaa aataaaattttgcccagctacctgatgacgtcatctggcaggtggccagg taggaaaatttggtgttactgtttaaaattaagtttcatACCCTCTAAGG ACCATCTGTGCCAaattatcaccatctgaagtatttttgtgctaacagac ctcactaatttgaaattttttttagtaaTAGAAAAATTATTCGATTTACA GAGACTTTAAGGCTGTCCAAAGTTTACCGTTTTTCAACTCTAAGGGGATG GCTTTTGAGGGCTATTTAAAAACTTAAGAATTAGGTGTGTTTTAGGTACA TATcatttttcgttcttttttatCCTCGCTGAATTACAATACTTTTCGCC TAAAAAGAACGGAGAATAACAATCTTGTCAAAGGAGTAAAAAGTCCTTTT TGCTTTTCATTATAAGATTCACTAAAAAAGATCCTAGATGACCCCTTCCT AggtaaatctttaaaattacATGAAATGGATCTCGATGTAAGTCAGGTTA ATAATAGGCAAGGATTAAGACCTCCTTTCCAACTGGGTTCTGTAATTTTA TACAAAGAATAGCAAACAAAGTAAAATTAGAATTAGAGTACCATGATTTT TTACACTCAGTTTCTTAGCGAGGTCCTGCTGGTAACCATAGAGtgattaa aaaatctttttttcatatGCGTCACTACCGATTAAATATagtcgaaatta aaaaaaatttattttgctgTCCTTACTGCGATTTTTTTGCTCTTGCTTTG CAGAAGAAACAACGTTGAAAATAAGATCTTGGAGGTTGAAAAGATGGtaa acttatttctttaaaattgtttGATCCAACTTCCAAAAGAAAACCCAGAA AGAACGGGTACGGGGAATATATATAATCTCCAATATGGCAATTTACGAGA TATACTGTAGACCTTAAAATTCTGACGAAGTATTACTTTGACAAGACTTA TCGTGAGGCATTGAGAGATTTTAgaagtatatttaaaaaaaaaaaaaaag actttagcTAGACATTACATTACGTGTCAATATGGCAAACGCAAATTAAT TTGCGGATATTTTAGTGAATAGCATTTCATAATTACAAAAACAATTTCGT TTCTCTCTCAATCGGATGCAATTCAGTTGTAAAGAGTAATTTACGTCTGT ACAACCCATTTCTTTCAAAGACATTTGAATTGTGTAAGACGAAAAACAAA ACCCAGAATAAACGCAATAGCTTGTAGAACCAATGCAAAAAGACCTAGAG GTCATCAAAAATGGGGATCATTCCTTTCCCTCAGTATCTTAATCAACGTG GTTTTGCGACTGGAGCTATTCATCCCTTATGCTAAAATCATTATAAAGTG ATTGAAGCCCGATTGAAGGGGCTACAGAGGAATCTTCAATCTTTCTCAAC TCAAGCTAGCAAAAGTTCAGCattaagattttaaattttgtgtgAAAATG CTACATAAAGTTTTAAAGTTAATGAATAGTTCAATTGGATTTAATCGTTT GATTCCGTTCCCAATTTTTAGAGAGAGTGTATTTCAATCCACGTTGGACA AGCTGGTTGTCAAATCGGTAACTCATGCTGGGAATTGTATTGTTTGGAAC ATGGAATCTCCCCCGATGGAACAGCTACCAATGAAATCACTGGAGATGAA TCGTTCAGTACTTTCTTTAGCGAAACGGGTGCTGGAAGACATGTTCCAAG AGCTGTTTTCGTTGATTTGGAACCATCGGTTATTGGTAAGATTCTTTGCA GCAAACATCAAAACCTCGTCTATCTAAATTAGCCTATCTCAAATGATTCA CTCATCTGTTACATGCTTTTTTATTCGAATTCAATTGATTTGAGGAAATT CATGAACTTTCTTCTATTGCTGTTGATTTTGTAAAACTCAATTCGTAAAA GAGTGTTCAAACATTAAAAGTTGAGTACTATGGTGACGTAGAAAAATatc atgtactgaaaacacGAATCCTATAAAATGTCAAGGTGAACTTTGAGCTG ACATAGTTTGGTGTCTGAAATTGACTGGAATTGACTTTTAGAGATACATC CTTTCAATTCAACTAACACTTTATTCAAAGTTGTTTGATACTTTAGATGC GGATCAGAATGCAACATGCAAAATAGTTCTTCTGTTCAAACACAAGCAGA AAGACTTTTTATTGAAGGACCTCAGATTTTCAGAAATCTAGAGGAAGAAC ATAGGTGGTTTTAGACCCTGTAGAACTTATCAgatatttgtaattgtaat tcattgtttttttaacGAGCGTTACGCTCCTTCGCATGTTCCCGACGTAC TCGCTCTTGAATATTGTATCATTGTTTGATTATATATTGTAGTTGAACAC CATTTAAGAGTGCTCGATAACTGTGTAGAGCCAttcataaatttatttca agATTTCACTGTTAAAAAAGTACATTACTTCGAGTTTCATGCTTACGGCA AATCATCAGACGTACAAATAAAAACACTTTCCTATATTTATTTACAGATG AAATTCGATGCAGTACCTACAAATCCCTCTTCCATCCTGACCAAATGATC GCTGGTAAAGAAGACGCCGCTAACAATTACGCCAGAGGTCATTACACCGT CGGTAAAGAGTACATCGACCGAACTTTGGATCATATCCGTAAATTGGCGG ATCAGTGCACTGGTCTTCAAGGATTCTTGTTGTTCCATTCCTTTGGTGGA GGTACCGGATCTGGTTTCTCGTCTCTCCTCTTGGAAAGATTATCCATTGA TTTTGGTAAAAAAGCCAAATTGGAATTTGCTGTTTATCCAGCACCACAAG TCTCCACAGCTGTTGTTGAACCATACAACTCTGTCTTGACCACACATACC ACTTTGGAGCACTCCGATTGCACTTTCATGGTGGATAATGAAGCTATCTA TGATATCTGTCGCAAGAATCTGGACGTCGAGCGTCCATCATATCACAATC TGAACCGAATGATCAGTCAAGTTGTTTCCTCAGTCACTGCATCTCTTAGA TTTGACGGCTCCTTGAATGTCGATTTGAATGAATTCCAAACCAACTTGGT TCCATACCCTAGAATCCATTTCCCGATGGCCACTTATGCTCCTTTAGTTT CTGCTGAGAAAGCATACCACGAAAATCATTCAGTTCAAGAAATCACAAAT GCTTGTTTTGAGCCTCAAAATCAACTAGTCAAATGTGATCCAAGACACGG CAAATACATGTCTTGTTGTCTTCTCTACCGTGGAGATGTGGTCCCAAAAG ATGTCAATGCTTCCATCTCTGCCTTGAAAACTAAACGCACTATTCAATTC GTCGATTGGTGTCCAACCGGATTCAAAATCGGAATCAATTACCAGCCACC AACTATTGTTCCTGGAGCAGACATGGCTAAAGTTTCCAGAGCTGTTTGCA TGTTGTCTAACACAACTGCCATTGCTGAAGCATGGGCTCGTCTTGATCAT AAATTCGATTTAATGTACGCAAAACGTGCTTTTGTGCACTGGTATGTCGG AGAAGGTAAGTTgcagtattttcaaaaataactgaTGAGGTTTATCAGTA GGCGAAGGAATCTTACTAAAACCTACCAACCTAATAGTGATTTCAGCAAA CCCAAGGTCCTCTTTGTATATGGATAGCTAGCTGTCTACTCAAAATTACG ACCGTAGCAGAATGCTATACCTTTATACTAAGGTCACGTGGTCTTACttc tgttgttgttgctgttgttggtCTCATTAGGATTTAGCTTGACTCATTTT CCATAAAcataccgagtttatcgttctacatctgaaattttagttttgct aagctcatttgacgtcaatcgatacCTCGATTGTTAAGTGtgtgtgaagg tttcgatcacagacttgcaccgcaatggactgtgttcgaattcCAAGCAC TGCCAgacagggtgttagggaaatatggtgataccTTCACTCATACGTCA ATTTCTATATTTCATTTCTAGGTATGGAAGAAGGTGAGTTCTCGGAGGCT CGTGAAGATTTAGCTGCTCTTGAGAAAGATTACGAAGAGGTCGGAATGGA TTCAGCAGATTGCGAAGACGAAGAAGATGAAGATTATTGAGGCTAGAAAT TTGTAGAAAAGAACTAttagaaattaataaaatgGAAGAGCTTTCGACAA TATTTGTTTATCAAGATTGACCAAATTTTAATTACAGAGTAATCTAATTG GATGAGTTGTTTTTATTCCAGGTATTTTGGAATCATTGATTAAATTATTG GTTGCGTTTAAAATTATCTTTTAGTAAATTTTTCTCTCGTGTGCATTGTT Aactatttttgaatatttaaacatattaactttctttatttttgaaatct aatgACATTTTAGCAAGTTATActttttatctaaaaagctaTTTTTTCTT TGTCTAGTGTCTTCGTTAAAATCTTTCGCTCCGAAGAAATAAATTAGACA AGAAACTAATCTCAGCAAGTCCAAAATTCACTCAAAACAGGTGTAATAGA AGTTACGACAAGTGGAAAATTCTATTTCTCCTAGTTGAAAAACCTCCCGA GGGGAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072708TCONS_00072708Clytia hemisphaericatranscript
TCONS_00072709TCONS_00072709Clytia hemisphaericatranscript
TCONS_00072710TCONS_00072710Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072710-proteinTCONS_00072710-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:493454..506111 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.8 0.77 1.34 0.95 1.6 0.98 1.07 0.91 17.47 9.07 28.62 23.56 128.49 137.08 277.79 241.59 122.63 135.73 76.68 66.63 150.41 145.81 47.42 49.06 27.92 27.3 36.27 39.74 368.09 245.73