XLOC_044795 (gene) - C. hemisphaerica

Overview
NameXLOC_044795
Unique NameXLOC_044795
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_71:849100..856698+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044795 ID=XLOC_044795|Name=XLOC_044795|organism=Clytia hemisphaerica|type=gene|length=7599bp|location=Sequence derived from alignment at scaffold_71:849100..856698+ (Clytia hemisphaerica)
TTTGAATATTCTACATTTTGTTTTCCACTTGCTGTTGGCAAAACTTTTAC ATTAGAAGATGGAAAAAGAAAAGCTTGAGAGTTTTGACGAAATGGAATAA CCAAAAATAGCAACAGCCACAACGTCATCATGGAGAAACTTAAAATAGCT TGTGTATTTTTACATCTCATTGTAACTTTAACTTTAGCATTAGAGCAAAA TGGGGCGGTTTATAGAGAAGAAATTACAAACGCTACAGTCGTCAACAAAA CAGAGTTTCATACAGACACGGTCAACCATAAGCTTCATTGCCTTATGAGA CCATATAGTGTTTGTTTCATTGTGGAAGTTACTGAAACAGTGCCTGACAA AGAATACCAATGTCGTTTCTACGTCGGAAAATTTGTGAGTGTTGAAACAG CGCCTGGGCTAGCAACCATCTATGAATCATATGCTGCTTGCTCGACTCAT CTATGTCAAGACCTACAGGGACCTACACATGATACAGACGGTGTCTATGC TATAAAGTTAGGTGGGAGCCCGATCAAGGTTTGGTGTGACATGACTCAGA ATGATGGTGGATGGACGACCATACAACGTCGCATTGATGGTTCGGTCAAT TTCGAAAGATTGTGGCAAGACTATAAAGTTGGATTTGGAGAAGCTTCAGG GAATTATTGGTTAGGTAACGACCATCTTCATCATATCACTGACCACTACC AAAATGTTTTGGTTCGTATTAAAGTCTTGGCGCCTGATGGAGACAGAGCT GAAATCATCCAGGAGAATTTTTATGTTGCTGATGAAGCGAATTGGTACAG AGTTCGAACTGGGACATTCGTTTCAGGACATAGTGGTTTGAAAAATGATT GGAACTACCATAATAATGTTGGCTTCACTACAACGTAAGCTATTTCAAAT TTCGTTCATAGTGGTAAAGGTTTGCCGAAGTCGAACCGAAAATATCTAAC CCAACGAAGTTAGGAGGGGATGCCATAAATATTTCACATAAATATTCCCA CTTCTTAAAAACAAAGATAATTTTCCCTTAAAATCGCTAGTTTAGGATCG ATAGATGTATAGTTtcgcaagctagacgactaaatTTAATAGAGAAGGTA AAATGATGGTAAGGAAAACCTAGAGGACAATATTATACAAACTAACATTA TCACATATTAATTATCGCATTATCATAAAACATCTAAATATTCaaaaggt aaaatataaatatactagccggtacccggcgtcgcacgccggtttagctg tttgctgaacgcatttaaagtcctttgagatgttgggaagatggcttaaa cacgatgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagattttttt tctcgcttcgctcgcgttatatttgccgtagttcttgatgtttaggaaaa ctttgatgtcaagataagcggagtgaaataatagacatgacacccTATTC TTCGAAAAGAGGCAGCCCGGGGGAGGggatacttaggcaagagaagggta taggtatgtgccggccttaagtgtgcctttttgaaacatggcagtttgaa aaatcggaaaataaaacttcagtcccactgaatcttttttgcccccagaa agatagaaatttggtcaaattagttccaaaaagtgaattaaaattcacac aatttcccttgtttcttctcctctttattctgctaagggtccgaggggca gggccaaaagtcagctcgcaaccatagtcccccggaaggcagctaggaca cgcagacaaaaaagcgtgatagatagcgcaattttatattgtttttttat aaaataacttcgtcataacttcaataatctttcaaattcaacaatgactt agatttacagcaaaatgattatcgacatacatgtttaaaggtccgttttt acgaagaaagaattctagtttttgcCGCCTTTTTACCGCCTTTTACCGCC TACCgcatttttaatgttgctgttgttctaacaaacttgttatgtgattc ttgtgttttattttatatttgttcttttctttaacagattctgtttaaaa aatttcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatcaaaacaaagt ctttataaaacggcgcgaatatcgttaaacaaatttgtggagcaagaaca aaataaaagtcatcttttaaaagaacaaaacattgctttcgaaaacgaaa gtgacacacaaaaaacaaaccaacaaagaaacacacatacagactacggc tattaatatatagatgaatATACATCACCGAAGGCTAATAAATCCAATAG CAAACGAAATCCTAATgaatatgttttattatatgccCAGAGacgaaaac aaaacataaatacTCTATTTTGTAGAGAGATTCACATAAAAAGCTCACAC AAAGcgaacattcgaatgtttttcctTCTAATTGTTTTTTAATGACTTAT ATTCACGAAACTTACAATTGAACTATTATGACTTTCtttaacaacaacaa aataaaagtaacaaaaagtcaattttcgaaTGCAAAATTATATATGCCCT TTAATTATTCTTCTCAATTTTCAACAGAAGTAGCCTGAAATGTGATCTTT GTTtgaacgaaaaatttgaaatctcttTGCGTAAAGACAATTTACTGAAC TGTAGATCTGAACTTATCTCAAAATGCCGGCACATAAACAAACACTTACT CGAAAACTTCGATTCTAAtgattgacgtcaattttaatACATAGTAGgtt tcgttggttattggattcaCATTAACCTTCGATGATCCTGAAATTGTACT ATCGGCTTCCCCTCGGCTTTACCTATTGATATCTGCTTATTATCCTAGTT AGCTCCAGTTTAAACGTATATTATCTCCGGCTTtcggaaaaattcaaaat tgacctTGCCTTTACAGCAAATTTGATTGAGCTGACCTTAAATTCTTAAT TTCAGAGACGTGGATAATGATAACAGCGATGAAAATTGTGCAGAAAGGAA TCGAGGTGGATTTTGGTATACTGGATGTGTCCGCTTTAATGCTAATGGAA TATATGGTCGCAATGATAATAAGGGAATTATCTCCAGATCTTTCAAAACC CTGGTGTCAATGAAGGAAGTCTCTACTGCCGTCAAAAGGAAAGACTGAAA GGTGGACATCATTTGAAATGGATCATATTCAATTGGAATGATTATAATCG GGTTTAAACAGTCTGATTTGAGCCAGAGAGCCAACCCAGGTTTGGGCATT GAAGGTTGACTCGCGGCCtcgaaaattcgagaaaatcaaaaaaataaaac cccTAGAGAGTCACAAGGATCAATTATACAAAACGTTAAGCCAAATCGGA CTATTTCTGAAGTTACCAGCCTAACAAAAGATTTTAATCTCGCTTTGGCG CGAAACTCGTCACCATTCGTCACCATACCCcgacattctttttttatgat taaaaaacAGCTAATTTATCTATTCAGTAGATCCCTAGAAACTAAAACTA TAGTTACAGGTAATGTTATTGAAATCAATAATTAATCATATAAAACCAAT TCAGGATTAAAATGCATTATGGGTAATtttttcccttcaaaatgaCAAAT GGATTCaagtactttttaaaaatgaatatCAAAACtgacattttgaatat ttatttagaAAGATTTCTAAATTCCCCATTATGATACGATattacaaaat ttttttccaaacaaaaataATGTACAACAAATTTGAATATTCTACATTTT GTTTTCCACTTGCTGTGGGCAAAACTTCTACATTGGAAGATGGAAATAGA AAAGCTTGAGAGTTTTGACGAAATGGAATAACCAAGAACAACAGCCACAA ACATCGCATCATGGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCA TTGTAACTTTAACTTTAGCATTAGAGCAAAATGGAGCAGTTTATAGAGAA GAAATTACAAACGCTACAGTCATCAACAAAACAGAGTTTCATACAGACAC AGTCAACCATAAGCTTCATTGCCTTATAAGACCATATAGTTTTTGTTTCA TTGTGGAAGTTACTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTC TACGTCGGAAAATTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCAT CTATGAATCATATGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGG GACCTACACATGATACAGACGGTGTTTATACTATACAGTTAGGTGGGAGC CCGATCAAGGTTTGGTGTGACATGACTCAGAATGATGGTGGATGGACGAC CATACAACGTCGCATTGATGGTTCGGTCGATTTCCAAAGATTGTGGCAAG ACTATAAAGTTGGATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAAC GACCATCTTCATCATATCACTGACCACTACCAAAATGTTCTGGTTCGTAT TAAAGTCTTGGCACCTGATGGAGACAGAGCTGAAATCATCTCAGAGAATT TTTTTGTTGCTGACGCAGCGAATTGGTACAGGGTTCGAACTGGGACATTC GTTTCAGGACATAGTGGTTTGAAAAATGATTGGAACTACCATAATAATGT TGGCTTCACTACAACGTAAGCTATTTCAAATTTCGTTCATAGTGGTAAAG GTTTGCCGAAGTCGAACCGAAACTATCTAACCCAACGAAGTTAGGAGGGG ATGCCATAAATATTTCACATAAATATTCCCACTTCTTAAAAACAGATATA ATTTTCCCTTAAAATCGCTAGTTTAGGATCGATAGATGTATAGTTtcgca agctagacgactaaatTTAATAGAGAAGGTAAAATGATGGTAAGGAAAAC CTAGAGGACAATATTATACAAACTAACATTATCACATATTAGTTATCGCA TTATCATAAAACATCTaaatattcaataggtaaaataTAATTATATGAAT ATACATCACCGAAGGCTAATAAATCCAATAGCCAACGAAATCCTAATgaa tatgttttattatatgccCAGAGacgaaaacaaaacataaatgCTCTATT TTGTAGAGAGATTCACATAAAACGCTCACACAAAGCgaacattcgaattt ttttccttctaaTTGTTTTTTAATGACTTATGTTCACGAAACTTACAATT GAACTATTATGACTTTCtttaacaacaacaaaataaaagtaacaaaaagt caattttcgaaTGCAAAATTATATATGCCCTTTAATTATTCTTCTCAATT TTCAACAGAAGTAGCCTGAAATGTGATCTTTGTTtgaacgaaaaatttga aatctcttTGCGTATAGACAATTTACTGAACTCTAGATCTGAACTTATCT CAAAATACCGGCACATAAACAAACACTTGCTCGAAAACTTCGATTCTAAT GATTGACGTTAATTTTAATACATATATAGgtttcgttggttattggattc aTTAACCTTCGATGATCCTGAAATTGTACTCTCGGCTTCCCCTCGGTTTT ACCTATTGATATCTGCTTATTATCCTTAACTTCAGTTTAAAAGTATATTA TTTCCGGcttttggaaaaattcaaaattgacctTGCCTTTACAGCAAATT TGATTGAGCTGACCTTAAATTCTTAATTTCAGAGACGTGGATAATGATAA CAGCAATGAAAATTGTGCAGAAAGGAATCGAGGTGGATTTTGGTATACTG GATGTGTCCGCTTTAATGCTAATGGAATATATGGTCGCAATGATAACAAG GGAATTATCTCCAGATCTTTCAAAGCCCTGGTGTCAATGAAGGAAGTCTC TATTGCCGTCAAAAGGAAAGACTGAAAGGTGGACATCATTTGAAATGGAT CATATTCAATTGGAATGATTATAATCGGGtttaaacaaattttattcACG AAATTTGGGACgaaatggagtttttacaagctcttatttgatttggttgg tcgttaaccagtaataaaacaattatcTTTGTCACTTTTTCTAAacaacg cgtcatttttattactttaaacatgaccaattattaaagtatcttataaa aactccatcttatctaagaaatttcgaaaagctcgtttttgtattatttt gtAAAAGAGAAAAACTTTGGATATTCACTGAAAATGTATCAGAGCTTGag accacgttcacacgctacggttccgtttcgctccgaaacgaaacgaagCC AATCTTTTGGttaaattcaagttttacgtcacttctaaccaatagaatgg cttcatttcgtttcggggCGAAACGGTGCCgttacgtgcgaacatggtca cGTGGCTAGAAAATAAGCTCCAGTTATGTGTTGTAGATAAACATTCCGCg ataagaaaaaaaagaacagcTATCCTTCTGAGGATATTCAAATGGAGAGG CGTGAGTTCCTTGGATGGCATTGAACGAATCAGCAGCACTGACTTTCAAT TTTTAGAAGAGAAANTCAAATGGAGAGACGTGAGTTCCTTGGATGGTATT GAACGAATCAGCAGCACTGACTTTCAATTTTTAGAAGAGAAAgaataaat cttgaaaaaaaatgaatatgctctgAAGTAATAACTCATACCTTGCCGCC TTTGATGCCGTGAGGTCCACGTTCACCAACGTCGCCCTGAAAATAATTCG AACCATAAACAGTTTTAAAAAGTTGAGAGGTTAAGTATGAAGCGTGAGAT ATGATTTACACCTTAACCAATTCAGCCCTATCCTCGTGGTCCAAAGATTC AAAAAATTGTCCAACAATTGTCTGAGCTCCTTGTAGAATTCTATGGCATG AGTTTTGTTAATTTTACGTCATAAACTTTATGTCTTTTAGCCCGTAACTT GAAAACTAGCCGAGGAAAGAATCATATCATCCCGTAAGGTTAGATTATCT TTATGCTTAATCGTATGATAAAATTGATATTGTATGTACATATAAAAACA TATCTAAGGATCAATGATGAAGGTCGTTCCAAAACGAAATGAAGCAGTTT TTTATATTGGTCAAAAATAACGTTATTCTCGACAGACCTATTAACCCTAC GCTAACActtttatgaaaagaatttaGATCGGTGATGAAGCACTTAAATA TATAGTCCACTGGGCGTTTCGTTTGATTCTAGTAAACTATTACACATTCC CCTGTGGCGTTAAGGTTAATAGTTGTATTATTAgcctgaaaaactttttt gttttgttttggagaGATACGGAACCACATTTAATTTTATCATTGTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072130TCONS_00072130Clytia hemisphaericatranscript
TCONS_00072131TCONS_00072131Clytia hemisphaericatranscript
TCONS_00072132TCONS_00072132Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072131-proteinTCONS_00072131-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:849100..856698 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.09 0.61 0.68 0.06 0.1 0.14 0.16 0.11 0.13 0.06 0.05 10.31 8.81 3.96 2.59 2.65 3.71 16.01 19.43 11.52 10.9 3.13 5.19 4.11 5.79 1.66 0.45 0.16 0.2