XLOC_001099 (gene) - C. hemisphaerica

Overview
NameXLOC_001099
Unique NameXLOC_001099
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:10386..17267-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001099 ID=XLOC_001099|Name=XLOC_001099|organism=Clytia hemisphaerica|type=gene|length=6882bp|location=Sequence derived from alignment at sc0000018:10386..17267- (Clytia hemisphaerica)
ATTTAAAGTCTTTTACAGGAGTAGACAACATCAGATTTCTGAGGTAAAAT GTTTGTTTTGAAATTCCTGGGATTTCCACAATTATCTACCGTGAGCGTGA GATCTGGTAAAACTTGCATCAGTGGAGGCTAACATGCATAGCCCTTAAAT GAATGCCTTGGCTGGTCATTAAAATACAACTGCATCAAAATGCAGCTCCG CTCGCAGCTCTACTCTACCATTCTTGTTTTGATTTAACTTTGTATTTTTA ATGACCAGCCAGGTCTTTCATTTCAGGGCTATTATATGCATGTTAGCCTA CTGATGCAAGTTATCCGATTTCACGGTACTGTAGTGTAGCTACAAAACAA TTGAAACTCCTGATTTCCAATACAAAATCAATTTTTTGTGGAAAATCTGG AATATATCTTTGGCCAGGCCCAAAAGACCTTTTTTCAAAGAAGACGTCCT GTTGAATAATTATGTAGTCCAGCCATAAAAACAAAGATAGAGCCTTGCAT AATTACCGTATCATGCATATTGTAATAATTATGCATGGTTTTATCATTGT TTTTCTGCTGGCACGAGGCAAATGCCGCTGTAAAAGCTACCGTAAATTTG ATTATTCCTTGTTTACCGCGGCAAATTTGCCGCGGTAAATTTTCTGAAAA ATGTTAATAAAGTCAAAGAAACTTCAAAAGTGCCAAATCGTTTAAGTTCT TTGTTTTCTGATCATTTAGGAGACGTCTAGTACTTTGGATGACATAGGCT GTATACTCCTATATATTTCTCAAGTCAAAATTCAATAAACAAAAAAATGC CGCAGCAAAATGCTGTTTTGCCTCAGCAAATTTGATAAAGAGCATTTTGC CGCGGCAGAAAAAATGACGAGGCAAAATAAGCTGAATTACCAGGGCTAGT AATAGTTATGAAAACAAATTTGTCGTCAAAGAGATTTAACAGTAAGTGAA AATACAGGCCAGAATATCAACAGTTCCATTTTTTAACCAATCGTTCCAAG TTAGAGCAGTCGATGGTACAAAGGTATAAATTTTTTCTGTACGTTAATAA TGTCAGGTGTGAAATTAATAATGGCTCTTTGAGTCTCAAATGAAATTTAT TTGATGCGTGTCCAACAATTTTAAAGTCATTAATTGAGCAATTATTTCCC TTGTCATGGCAATGTTTCCTAATGGCGGTCGCATAAGTGTCGTTGTATTT CAATTCTTTGCTCGTCAGAAGAGAGATTTATACAAAATCAGGGAATCGAA ATTTCTAGACAATCGTTCTTTTAAATCGTTTGTTAACAATTTTGTAATAA AAAGTTATGTTTTGTATAAGAAGCAAATTTATTTGGTTCCATTGGTTCAG TGTATCAAATCATTCAGTTTAGTTTACACTTTGGTATCTTCATTGTGTCA CAGCGATAGGTTTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCCATC AGATTTAGGCAGGGCTGTCGGATTTAAGACCACTCACGGTAGATGTTTTG GTGAATGTGACACTCTTTTGAATAACTAGAGATAGAGACAAGATAATTTA TCATGTTTTTATTGGCTGAGGAAAAGTAATGTATGTGGAGTAATTAGGCC AGGCCCAATTAATTGTTTGGTTCGTGTCCTAGAAGCTTTGAGAAATGGAT TGGTTGGTAGCTAAAATTGGACCTTTTTTTCATTTTCCCACCAAAAACCT CAATTTTTTTAATTCCTCAAGCAAACGTGCAATCCTGGAATCCAACCGCA AATGTAAAGAAATAGCCTAAAGCCCGGATCCACAAAGGCATATGCTGTGA CCGCAAGATAACTTCTACACTTGGAAATTTAGGCGTTTGCGGTGTGTGCT TAAAGGAATATAGCTGTGGCTCTCTGCTTTTAGGTGCTTTATATTTGTTT TTAAGTACGGGTTACACCAGGACATGTTCTGTGCGCAAAGTGGATGTTGT TTATAGAAGAATCAAAGCAGTCAGTTAATAGAGAACTGCAGAGATGTAGG TTTAGGCGCTGTGGTATATAGTGGTCATTGACCTTGATTGCTGCACAATC GACTGAGGTTCAATTCCCACTCGGAGCGGTTCACTTGGCAAGTGAATGAA CCTTCGCCCGGGTCAGCCCATGCCATGTAAGGGGAATTGATTAGTCAGTT CAAGGTGCTGACGGGTGCTAATTGAAAGCGCCTATAGTTGCGAAAATGAG CCTCCTGCGACTAAGAAATAGTTATCATGTGAAAAGGAGGAAAATTTATT TGATTATTCCGACTCAAAGTGAAACACATTTTCTCAAAAATTTAGAGTCG GTCGGAGGACATGAACCAAACTATCAATTGGGCCTGGCCTTAGTTATTCA ATAGTCGAACTCAATTTCGATTTAAAAAATTCTCAAATTTATAGGCCTCT AAGAAAATAAATTTTGGCGAGAATTAGCTTTAGCAAACAACCCATTTTTG TTCAATTATGTTTTAGCTGAAAAAAGAGGAAAAGAAGGGTTTTTAGGAGA AATAGAGATTAAATTGAAAGAAATTTCAATTTAGCAATTCACAATCTCAA GGGGACATGTTCATAAAAAAAGGCAAGCCCTGTGACATTCAAAAAATATG AAAAAATCATTTTTTGTTGATAAAACCTTCAAAATAGCTTCTAGATCAAT AAAATTTCTGGGGTAAAAAGGTAACACAGGTCCAAAGGCACTAGAGTTGA AAGAATTTGGATTTTTAGGTTATTTTGCTGAAAATGGCTAAAAATGTAAC ATTTTCATTAAAAATGACCTAAATTTTTATTTCAGGTGAAAATAATTAAA GCAAGGTCTGGAAATAAAACTTTAGTGTGTTAACTACCCGCTGTTGTTAT TTGCGGAGATTGCACATCGTTAAACCAAAGGTAATGGCTAAAGAAGTAAC ATGTTACAATATTAGCCGGTTTGTCCTATTATTTGTCAGTAAAGTCATAA TATTGTCTCAAACATAGCATGAAGTCTGCTTTTTGATAAAGGATTCATTG ATAAATCAACAAAATCTGGCTTAAAAGGAACAGAACATTGCAACCTTTAA GCCTTGTTACACCATTAGCCAATCAATTTTTTAACCCAAATGCATTGCCA ATAACATCCCCTTCAACCCCCTAATGATGCCAATGTACCATTTTTTATGT AAGTATTACCTCACAGCTGTTTTAGAAATCCTTAGCCAATTTTTTTAAAA ATTGCAATGTTACATCATTAGCCAGCTTCTTGCAAGCTTCAAATTATCAT AATTTGAGATATACTAGAGCCATTTTTTTAAGAGTCTTCAGGGTGTGATA CCTTACCCTCTTGGATTTTGCTGAAATTTAGACCAAATGATCTATCACAA AAGAAAATAAGACCCTGAAAATCTCACCTTGATATCGCAAAGTAGTTTTT AAGATACAGCGTCTCAAAGATAGGCTACTAAGCGAAAATTGACCCCTGAA AATCATGAACTCTGGTGGGGAGCAGATTTTGAAAGCCAATGAATTTTTAT TCAAGTACATTAGAAAGCTGATTTACAGTGGATTTCAAAAACTTTTTGTA GGGAATCAGAAAAAATCAAATTGAGTCTCCAAAATTTTCCCCGAAAATCT CTAGCACCTCCTGTAGAGGGCTTCAAACTTTGCGTAATCTGGGTATGGAA GCACTTTTAGCTGGCTGCTGATGGTCCTTGGGACTTTTTTGAAGTAAACT TTTGACCTGGAGTGGTTTACTGGTGGGTTTTGGCCACAAAAATAACATTT TCAGGATACCCATCTTTGCGTAACCGTAAAAAATGGCCGAAAAAATTGCT ATTTTGGCAGACCTGGAGCAAAATTCAAGATGGCGCATCTTTTTAAGGCA ACACCAAATTTTTTTGAAACTTTCAGCAAGGCTTCCTTAGTAGGTCTTGT TTATAGCCTCAAAAAATCTCAGTGGGCTTTTGAAGTCTCTTAAAGATATG ATCGATTGAAAATTTGCTTAACTTCGTTGTTTTCTCCCTCTTAAAATGCT AAATCAGGCCCACTTAAGGGCTCTAACAGTATAGTTTTTGTCAAAATATT GGTTGATCTTCTCTAGCCAACTAATCATTGACATTAGGGGAATAACTGAA AAAGATTTCAGGTCATTTCCATCAACAGATGACATTTTATGACTGTTTCT TTATTTTTAAGGACAGAATATGTAAAAAAATGAGACTGGCATCTGGCCTT TCCTACCATTCCAGAGCCCATATTTCCAGGAAACGCCTCAACCTTTCACA ATTTGGTGAATAATAATCTTAAATATAAGCAGGTTACTTCAACTAAATGG GTTTAACAGTACTTAATTCCTATTCAAAAACTTTTTAGACTCATTCAGAA ATCCTACTTTGACAATAATTTGCGCTTTACCGCAAAATTTCTAAGTCCAA GTGTTGTGATTAGCTTTAGACTGGGTGTACTTTCTATAATAATACTTTAT TTTTTAATAATTATACAAGCTTTTACAAAAATTAAACATACTTAGAAATA CACACACTTCAATAATCATGAAAAAGCTTATTGTTTTGATCAGTATGATA TGCTTGACATTGTCAGAAATGGAAGATGGAATTTCTGTACTTGTTCCAGC TGGAAGGTCAGATTGTTACTTTCGTGAATTGAAAGTTGGAGATAGAATGG ACCTTGAAATTCAGGTAATCAATGATATTGCTTTTTTGGTGTCTTTGTTT TGCTGATTTATCTTTCTGGAAACTCTTAATCTTTTTTAGCTAGGTCTATT AAGAAAAAAACTGTGATTTTGTGAATTTTTGTACCCTTATCAAGACCTTT TGTACCCTTATTTCCAAAAGTCTAGTGTTTTGAGTTGTAAACATGGATTT TTTTTGCTGCTTTTGTGACGTTAGCAGTTAGGATGAAAGTTTCAAAAGGC AAATGAAATAGAAATTAAAATTGATTAAAAGTGTTCTATTTTTTTATTAT GACCAGGTCTTAAGTGGAGGGCACATTGATATCCATATTTTAGTATTATC GCCAACTGGCAGGATAATCTTAGACGAGCAAAGTGTCACAGAAACAAGTA CTGAAATCAAAATTGATGAAAATGGGGCATACAAAGTTTGCTTGGATAAC ACATTCAGCTTGAGATCTGATAAAGTTGTATATTTTGATTTGGGTATTGA TGAACACAATGGGACAACAGTAGATCATGCAGAATTATTTCAACAGATGC AATTAGAAAAAGACGAGATTGATAATACTAAGGATATTGCAGTAAGTGAA GCCCTCTAAAACCAATCATAACATTTTTACAAGTTTCGACTTTAACATCA AAAAACAATTTAACGATTTTAAGTAAATGAGTACGAAAGAAATTCCGAAT AGTACATTATATACCAATTTTAACATTTTTACGAGTTTCGACTTTGACAT ATTTAAAAAAAGAACAAATATTTCTCAGAAAGTATAAAGTTTTCTTAACT TTCAAATTTTTAATTTTCTTCATTTCACTCTTAGAAATCGTTGGATAAGA TTGAAATGATCTTTGAAACCATCCAAGAAATGCAGACGAGATTCAGAGCA CGATATGCTCGACACCATTATTTACAAAATGCAAACATGACATTAGTTCA ATGGTTTTCCGGAGCTTCATGCTTCTTGATGATCATGGTTGGAGGACTCC AAGTGTTTTTGATTAGAAACCTTTTTAAAGAGCAGAATGCGCAAAGAGGA ATGAAAGCTGGTCTTTGATGATTGGTTATAGTGTTCTTTTTAATAGCAAG TATGAGATCATCGTATGCATGTCCTTTAATTCACCGATCCGTATATCTAC CCTTACAAGGTATTTATCCAAGCACTTTCCTTACCACTATTTTGGTCTGA AATTGAAAAAAACTAAAAAAACTAAAAAAAAGTTCACTGAAATTCCAAGT TCTGTCTCAAGTGAAAGTCTTTGCCTTGACCATTTTAATATTCTACAAGC AATGAATTTGAGGGATGAGATCTTGCCTACTGTCACTCACAGGAAGGATT AAAGGACAAAAACACGAATTCAAAAGAAATAATTAGAAATTCTTTTAAAA TAGTCGTAATATATGGGTCTCAACCAAACCTAAACAAAGCATCCATAGAT TTTTCATCAAGAATTTTTTTAAACACCCCCTTCTCTCAGACCCGGTAGGA TTTTTTCAGCCAGTGGGGATAGAAATAACGGACTGAAACTCGATGGGGAT TGATATTCCCATATTTTTTATGGCTGGTGATTTCAATTCTTTTGTTTTCA AGTCAGAAAATTCAGTGGGGGTTGGAAAAAGAGCATCATATTTTGTAGTG AGGATTGGTTTATTTGATTATTTTCAGTGGGGACAAAAATTGGAGGATAA TCTTCCACTGGGGACGATATTTTGGACAATTTTTCAAGTGGGAAGGGGTT CCAGTGGGTCTGTGAGAAGGGGGTGTTTTAAAGCATGTTCTGTTGTAATT TTGTGAACCATCTTTAGGGTTTTTTATGAATTTTAGCAATTTCAAGGTTT CCACGATAAGCAATTTTTATATTCTTTATANGGGGTTCCAGTGGGTCTGT GAGAAGGGGGTGTTTTAAAGCATGTTCTGTTGTAATTTTGTGAACCATCT TTAGGGTTTTTTATGAATTTTAGCAATTTCAAGGTTTCCACGATAAGCAA TTTTTATATTCTTTATAAATATACCTAGCATTAATTGTAATTTATAATTT TTTCATAACGATATTACTTACAATTTCTATCAATTTTGTATTTTTTTGCT ACCGAATACTGTTAACAATTTCAAAGAATAGTCGAAGTTATAGAAAAGAT ATTTTATAGAATTTAATATAATTTGTTCAATGTTCAAAATTATAATTTTC TCCCATCTCGATATTAGGAACTAAAACGTCAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002101TCONS_00002101Clytia hemisphaericatranscript
TCONS_00002100TCONS_00002100Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002101-proteinTCONS_00002101-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:10386..17267 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMED1transmembrane emp24 domain-containing protein 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.5 16.07 6.07 5.98 12.18 8.45 12.79 13.45 8.95 8.67 9.3 5.46 9.39 7.91 8.98 9.06 12.21 12.29 7.29 11.82 8.38 8.69 15.24 15.51 14.05 14.79 9.16 5.87 19.58 18.98