XLOC_000830 (gene) - C. hemisphaerica

Overview
NameXLOC_000830
Unique NameXLOC_000830
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:633542..645024+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000830 ID=XLOC_000830|Name=XLOC_000830|organism=Clytia hemisphaerica|type=gene|length=11483bp|location=Sequence derived from alignment at sc0000011:633542..645024+ (Clytia hemisphaerica)
ATAGATATGAAAATAAGATATCAAAATTAAAAGTCCTATTGGTGTTAGCA AATTAACCGAATGGTGAAATAATGATATTATAGAAGTTACTGGATATCCA TATTATTATGGTGGCATCTACAGATGATACTCCTGACCTTCTTCGTATTG GCGAATACGTTAAACAACGTTGGAAGATTGTAAGTCgatattttcatatt tgtcAAAGAGTTCTTGGCTTAACATTTCAATATTTGTATGAAATCATGTT AGCAGCTTATCAAACTAATTAGAATAGAATGGCTTCCACAAGAGAAATCA GAACACAAAAAACCAAATTCAAATACCATTTTAATTGGAATCCTCAAGCT GCTGGCCCTTCTTAGATGTTTAGGCATCTGtctattaaattttttttctt ttttaaataaaaatttcttcaaCATGTGTTCTCCAAAAGGGTCACTGCTA TTTGTCATTGTTGATACTATTTATATGCTTTCTCCCTACTTGTATctcat ttcactgaagattggcGCAAAAGccccatgaaactctgagtatGAAATAA GAAGTTAACTCTTAAAATATGATGCCTTCTCCTTACATAGAGATAATGGG AAAAAGAAGCTTTGATCTCTTTGATCTAATGCTTGATTATAACATGCTTT GTAGTTGCATAAAGTAGTTTCTTATAAACATTAGGAATCGTATGAAATGT TTACAGTTATTTCTGCCCCCCTCtaattaaattgtttttattttgtctta GGTGAAAAAAGTAGGTGGAGGAGGTTTTGGTAAGTTGCAATGTTCTATAG TCACAAATaggttgaaatatattttttttagaaattttagaaatgcAATC CTTAGTAAGATTATTCAAATTCTctgatttcattaaaatatgTACCCTTC TAGAAATGTATAAAATATTGCAAACCTCGTTCTCAAAGCCTTGTTGCTAC GATACTTCAACTCCGTCAGAAGACAAAATTAATGTTTACAAGCAGTTTTA TATCTTTTGGGAAAACATATTACATGTGTAATTGTTTGAAGTAATTATTT CAATTGAAATTGAGCCTCGCAATGCTCTTGATTTATATCGAGAAGTGTGT ACTGTAAACTGATTTTTGGGATTCATTTTTGTTTcatctcttttttttta acttaaacTTTTAGGTGAAATCTATCAAGGTCATGACACAGTCACTCATG AAATGGTGGCTCTCAAATTGGAATCAGCCAACACTTCAAAGCAAGTCTTA AAGATGGAAGTTGCTGTGCTGAAGAAACTTCAAGGTGTGTATCTCCCAAG TTAATTAAAGTCTCTCCTCAttaggggccatccatatagtacacATGCAA GAAAGGGGGGGTGtaaaaaatttggcatttttgttggTACGTGCTATTTG GATAACCCCTTACGTGATTGTTTTAAAAGCAGAGGTTTGAGAttaaatat ataaattttttgaatttgtagAATTATTTGGTAAAGAAGATTTTCTAAGG GCCATATTAAAGATACAGGCAAAATGTAAAACCTGTTTAAAGgtttcatt ccattttatatccatacatggAAGTTGAAGAACATGTCCTGGGTGGGGGT TTAAGGAAATTACTTGCATTTTTCCAGGGAGtttgttttaagtttttctt tcaaagggtTTTGGTGACCAAGAATCTTCTGcctgtattttcttttttcc agggGCAAAATGATAAGCTCGACTGAGTACAAAGAGTATTTTTTGAATCT CCGGGGATGTAATTTAAAttacttaaaaagtttttctgaAGCTTCCAAGG GGGCAAAGATCCATTTAAATGCATCCAAACTCACTTTGTGTTATAAAGAA GAATTTTCATAAGGGTAATAGAAtccttttttcaagatttttttttgtaa atttttcctTTTGAAGGGGAAATCCCCTTAATCGAATCGTCCAGCTCTTG GATGGATACTAAATGGAAGTTCCAATAATATTATCAAGAACTATTTTAAA CTAATCGTCTGACGAAATTTTCTAACCTGATTTTCATCCCTAGTGATTTT AATCGGGTTGAAGGTAGTCTAGAGCTAGACTACTAATTAAcatcagtttt actcaaaagctTCTTTTACAGTAGTAGAAAAAACCTACCTAGAAGTTTGT TTACTTCTCGAGTGTTTGAATTAGTATTGACACTATTCCAACTTCCCGTA cggcttttttcttctttttgactttgagGCAGGATTGCTCCAGCTACGTT TTGTGTTAAAGAATAGTGGTCTGGAAATCGAGACTAGTTTGAAGGAAAAA ATTCAACTTAACGATCATTAGTACATTAAGTATTGTTATTGATCATTTTT AGGGAGAGATCACGTGTGTCAGTTTGTAGCTTGTGGACGCAACGATAGAT TCAATTATGTCGTCATGTCGTTGGTCGGACAAAACCTAGCGGAATTGCGA CGTAGTCAATCTAGGGGTGCATTTTCTATTGGAACTATGCTGAGATTGGG AGTGCAGATCTTGAATGGAATAGAGGCTATACATGACTGTGGATTCTTAC ATCGAGATGTCAAGCCTGTAAGTTGTATTCCTCAAGATAAACACTGTATG TTTTTATCATCATTTTTGGGGATATAATTGTCCATGTGCAACCATCTAAG attaaaattttagtttttttaaatctgatgtaTTTTAGGTTTTCACTTTC GAAACAGTGAGCGTTTTAATTTAGAAGTATGACGCTTATAAGCCTAGCAT ACCCAGGCTGACATTTTTGGCTTCAACACCttagaacaaaagaaatttaa gGATATacgtgttttcttttttataagcatacaaaaatgcaaaagctggc tcggaaatgcttagattgagagatttacaaagctgaaaaatgctttgagG GATGCTTATAATCCTAAGCAAAACTTTAGAGAAATTTcgaaattccagcc aaaaacaaacaaaatctaAAAGGAAGCTCAAAGTAATAGCATATGCTTGA ATTGTTGCTATatatgagcctagatatgcttataagcgcaatgcttatta aaaaaaacatgtgcCGAGCTTCAGCTCAAAATGAACACTATACTCGAGAA AAGAACGtttgtaatttttgttgttatgatatcttttctttttttaagtc aaattttGCAATGGGTAATACGAAACAAACAAATCGGATCGTTTATATGT TGGACTTTGGTCTTGCCAGGCAATACATCAACAATGAAGGAAATGTCAGA GCAGTGAGTACTTCCATTCAACCTATcttattcattttgattgttttaac cctttgagcatcttcattttttaccaAAGATGCCAATTCACATTTTTTAT TGCACACTCGCAAAAATTCAAGTCAATTGGAAATAGTTCGAAAGTTCtca acaaattttcttttggaaagaAGGGGATATTAAAGGGTTAATAACTACAA GGAAGGATGCTGATTGTTTTTCGTTGTTACATTATTTTTGTGGTATTCTT TATTTCAGCCTCGTGCCGTGGCCGGTTTTCGTGGAACTGTCCGTTACGCT GCTATCACAGCTCATGAAAATAAAGTAAGAAATTCGGTCCATTTAATTGA TTTCATTTATTATAACACCAAAATGCAATATTTGTAATGAAAGAACTGTT GTATAAACATTTCGAGACATGTTAACTGatcaaatttcatcattttgagA CATTTTTTGAGATCATAAATTCCATTCGCTGTAATGGGCTTTCCGCCTCC CTTTCCCTTCTTTGGACATAAAGTATGCgtactgaaaatattaaattaat ATTATCTCGTAACAGTTATCATATCCTGTATTATCATGATTATATACATA TCGAGTAAGTCCAAATAAAAGTGACGCTTCTACCAGTAAAGATCAACACA CGTTGGAACCCTCTCccacaaaaatttgcgaaaacgTCATCCCCAGTGGA CAATAATACTCCAATATTTGTCCCcgataaaaataatcaaataaacaaat cctcactcgctgcaaaatgtttcactttttcctattcccactgaattttt ctGACTTCGTTTTGAagtggaattcaaatccccagccataaaaacatgtt aattaaTCCCCATCCAGTTTCAGTCCGCTTTTTTACCTCGATAGGCTGAA AGACCGACATAAACTTCAACTTCAGGTTATTTCAGAAATCCAAAAGTCGA AAAACAATTTgtaaaatgtataaaaattgTCTTGTTTATAGGAAATGGCA CGTCGTGACGATTTATGGTCTGTGTTTTACATGCTTGTTGAATTTGCTCA AGGAAGCCTTCCCTGGAGAAAATACAAAGATAAGGTATATCATtgcctct tttttttttctggcaAGTTTTCGCAAAGAGTTTTTATTAAATGATTTACG GCGTGTGTAGGTACTGCCAACATACCTAGAAAGTTTGTAGTACGTATTCA CCCCTCAGTTTTGAACTGTAATAGATAGAAACAAAAAACTCCAAATTTCT ATATTTTCTCTCAAacgcttttttaaatttcaggaAGAGGTTGGGAAATT CAAGAAAGCATACGAACATAAACAACTGTTGAAACACATGCCTGCAGAAT TCAAAGAGTTTCTTGATCATATCAAAGCATTGGAATACGCTGATAAGCCT GATTACGATGTAAGAACAACACTTTCATTTTCCTGCTCCTTTTCTTCCCA GATCTTTTAAAAGTAGCTAATATCCATAGCTTGTTCTATCCATAACCTGG GAGATTTTTGAATACCACTATAGGAAGGAATGCCAGCTCTATTCTCATTT GTATTCAGTCTTACCGCTAAGTCTATAGATTACTTGGTTACTTAGTTTAC TTTACAGTTCAATATTCTTCAATTTCATTTATAGGGCTTTTGCAGAAAAA CTTCGTTcatagggggtggaggatatattattttcctcaatgatctaccc ctggacattttgatttttcaccccctggacaagcatcaaatcgaccccct ggacactaaaatttacccctggacattagaaattcaccccatggacatgg cagtttttcaggattttttcgatacccctggacaatatatcctctaCCCC CTATGGAAGgctttttctggaagagcccattctatGGTGTCCCGCCAACT TTCATGTATTTCTGTATGTTAAATTCTCTTCATTGTCCTTTTTAACAGTT CTTACGCCAATGTTGCGAGAATGCACTCATGAAACGTGGTATCCGCCAAA CAGATCCGTTCGATTGGGAAAAATCTACAGTAGATGGCTCCCTTACCACA ACCACATCCAGCACTTCCAAATACATCGCTACTCCACAAGCTCTCAAACC TGACAACGCGCTCAATAATCCGTCCGACTTGCCGCGCTCGAATACCGTTC TAGCTGCAGGGGAGTTTAGTTTACAGTATGATGAAGAGGACCAGCAGCAA GGACCGATTAATGTTCAAGTGCCTGAAGGACGACAGCCcgaagtcattaa taaaaagGTATGTTCTTTCTacttctttctttcttctttctatcTACTCT ACTATTTACTGGAAAATTTCACCAGTTGGAGCGAAATTCCTCTTCGTTTC CTGAATTTCgtctttatttttgttattttattctAGCTTATCACAGTTTT CTATGAAACAGAGGGCTAAATATATATATAGACTTTCGTGAAcctttgaa taaaaaatattcatgtaACATGTGTTTTTTCAAGGTTACAATAGCACAcc gctatgcaaacgtcataattattacttttaacatttgaccgaaattcaat cttaccatccttttcatcttgattcgtaaTGTGTGCAAGTTACTTTGGTA TTTAGTCCTGTAGAATTTATAGTCGACCTAGAAAAAATTCAGataaaagg tttctatataccgttggaaagataattttattaGCTTTCGAATGAGGGGT ATAGTCACATTTTACACCTTGGGCAAAATAAGTTATTGACAAAATGGTGA CAGGTggtatttttgctaaattccgaaAATGAGCACTTCAAAGGCTTTTG AACAGTTCGCTATAAGTCAGGATTGGCTCATGATACAaccttgaaacttt gcaaaacttCTCTGAGAATGGTAAGGAGTatttagaaaattcaaaattta aaaaaaaaaatcgaaaaaaatgatgacgtcatcaaaaatgacaatttttg ttaaaaaaagcatgtttttCGACAAAATATAACTAAAACTGTTTTAATGC GAAGTAAGTTTATATTAAAATGACCTAATATTTTCTACACATTATCTGCT AATCATAAAACTGACATAAATTTAGTAAAATTTAGCCATAAACATCATCG ATGCTTCTCAAAAGATCGATTCTGAGCAAGGTTAGCTTATAACGAGTGAA TTAGATGGTAGATGTGAAAAGTTAAAGCAAACTCCAACGTGAGACTCGAT ACGACATTAATTCATTTTAAACTATTCGTAAAATCCTTAATAAAAAACAC TGACTGGAAGCATGAAAAACATAATTGCAAGAAACCTACTTATGAAGACG ACATTTCTAATAAAAAGTTGTACTGAGCTAAACAAAAATATCCATAAAGT TTCTATCTTCAAGATCTACGTCATAAATAGGAACATTGTCCTCATTATCA TTATCGATTTCGATATTTCTACACGATGTACCAAGACACTCTTTGCAAAA AGTGGTACATTTCAGACCTGATTTACGACAGGTACAACGATTGCTATCGC ATCCACTTTTGCAATTGTCAATAAGTGTAATTGAGTTGCAAAAGCAATTA ATTCAAAGAATGATGGGATTAAAAATCGGACAAAAAGTATTcttgatgtc tatttttagaatcactgCGGTATGTTATTGGCTCTCGCTAATTTGAAATG GAAAAATGTAATTTGTTCGAACTACAAAGGGAttcgagtttgaaaaaaaa ttaatgggTATTATTTCTTTACGGGGATTGAGTAGTTGTTCGGATTTTAA AGATTCGTCTCgtataaaagaaatttgaattagtGAGAGCATTGTATTAC TATCTCTTCATATTTTTAATCTAACTTGCATTTTCTGTTCCTTCGCACAG CAAAATAGTTTCTTAGAGGAGCTTATTACTGAAAGTACTTTCATTGAACT ATTTTTAGGAAGCATCATCGACTCCGGTGAAACTACCGAAAGCTTTCCTT CAAGCCATGAAAGAAAATATGTTAGCCGACGCTCGAACTAAAGATTTCAA ACCGTCTGCTGCTAATCACGacaagaaaaattcaaagataCCTGTTTTAA AGGGGAAGTTAGCTACAAAATCACAGAAACAACATGACTCAGGATCTACT AACCATGCTGGGAAAGTTGCAACTCAACCAACGCCCAAAACAGAGGATTG TCCAAACTTAGAGAAACGCATTTCTCCGGagattttgattgaaaatgtcG ATCAAAATGGACCGGCTGAGGGcgtttgtaaacaaactgaagTGGATTCG AAAAACGAAAACAACGTAGAACACAGTAATGATAGTAAAAGTAAAGAATC GAGCAGTCGAACTAAAACTTCAAAAACCGGGAAAATTGATGAGAATAACA CCAAAGAAACCaataagaaaatattgattCAAAAACAATTAGAGGAAGGA CCGTTCTTTGTTCCTACGAAAACAGAAGATGAGGTTTTCGACCCTGGTAA CGAAATGCTGGTTAACTTACTAGGCAATATtatggaaaataaaaacaaga aactatCTTTAAATCAAGAAGAAATTGTAGACACTGCAGATAATCCAAAT TGTAACGTAAATGAGGAACCTGCAAATATTTATAATGAGGAGATTAAAAT ATCAGCTGATTCTCCAAAGAGAAGCAACGACGAATCGCTACAACTTAAAT TACCGGAAAATTTACCGAAAAATAGTCAAGTCAATATTGCCGAACAAAAT ATCCCTGTTAAGGTAACCAAGAAAAACGAAATTAATATTTATCATGGCGA GATAAATAAAGAACTAAACCATGTAAATGATATACCAGAGGTCAAAGTAA GGACTTCCAATCAAATTGATGTAGCTGTTGAAAGTAAAGAAAATGTCCAA GATGTTCGGAAAAGGACTTCAAATCATAGTGATCACACGGTTGAAAGCAA AATAAAGGATTCTAAGATCGAAAACGACAaggacttgaaaacaaaagcaa cTATTGAAGTCAAATCAGATGCGAAACCATCTACCAACATTCACAAGTCC agttctttttcgtttttgaaCGCAAATCTTCTAGCAAACATAGAAGACCC TATAGAGCCAGAACACGTGATCGATGCTAATGAAACCAGtattaaacttt tgaaattagaACGGAACCCCTCATCAGAACATTCGAAAAATTCCTCAGTC TCGAAAAGCAAAGAAGAAGAAATGGTTGAAAAGCATTCAggagaatctga agttgaagatCCATCTTTGGAGAAACCGAAGTTGCTTCCACCAACACCAA CTCACAAACAAGACGCAAAGTCACACTACAATAATGATCAAACTGAAACT GACAATAACGATCTACAAAAAAGTGATCgattaaagatatttcaaacACC CATAGAAATTGGGAGGAAAATTGAACCAGCCAAACATCACGAAGAGATTG TTGACCGTGATGAACTTGAGGAGCGTGACTGTGCACTAGGCACCATTTAC AGTGATGATAAACTAACTTCTGGTTATTCGTCACATCACGAAAATCACCA AGCAAAGGAAAGCTTCCATAATCATCATCAACCCATTGTTTTGGACGCGA AACAAGATAAAAGATACTCTACAGACAACCTACCACAACCCTCTTTAGAG ATTCGACCAGGTAACCCTACCCCGAACCTAGACGACAACCTCCCTTCTTA CTACCCTAGGAACAACTCCCTACCCCCTAAGTATCTACCACCCACGCCAA GTAGAGCAGGACCCTCCAATAGTGTCGCTAAAACCAACAAGACTAATAAA GAAAGTAGGACAGTGTTTAATGTGCTTTCAAATATAGTCGATGATTTGAA ATTTCGTATACAAAACAAGGCGTTACGAACACGATATGGTAGTAGTTCGG ACCTGACAACCACTGTTGAACGTcgttctaaaaagaaaaagagaatgtAT AGAAGTTTATCAATGGACTGTTTAGATGCTCCTGGCGGCAATGACATTGG AATCCTTAGATCGTCATCAAGTAGCAATCGAATAGCAGGCGGCGCCTCTT CATCTAAGAtgaacaaaacattcgatttacAATCTAACTACATGGACTCG TGCATAGATACAAAGAATCGACGTAAAGCTGAAGTTTTAGCTGAAGATTC TATGGATGAAAATTCTGAAGGATTTCGTGGTGAACCACATGAGAATAAAT ACGTTGTTGAGAAAACTGAAAATATACATTATTTGGAAGATGCTTACACC GGTGAAAATCCTTCGTCGGGTATAGTACAAGATTCTTTCGAAGAACTTAA AGTTGGACCACGGTTTACTGATAAAGAGTATTCCAACGAAAGTCTCGATA GCCCAGAATTCAATACGAACGAAACAAAGAAAGATAGGCGAGGCAGTAAA TCCTCCTTAGCAGAGACGTTTATCAAACGGAAAAATTCGGCcagtaattt ttttaagaaagataagaaaaagGACAACTCGCCCGATTATAAGGCGAAAA ATGATAAACGACGTTTCGATGATATTCGCATGAACGCCGACCAATCAGAT CGTTCAGAAGAGTCGAGTAAAGCTGTGGTCCCTCAACCGCCGAGTGGTCG ACGCCGTGGTGCCAAGATCGAAGGGAGGTAAGTAGATGTTGTTCTCTTTA TCTATATTTCTACTACCGGTTGACCCAGAAATAAATATAAAGGTTTGATG GTTTACTTTGTCCATAATAATATgaatttttactctttttgtcaagagga aaggcaaacttaaaatttgacataaagctttttaaaatttgtaCAGTGGt tctcaagttataagcttgTGAAGTCGAAATTCgcttttgaaaaagtccaa aaacacATCAAAAAAGGATATCAAATTAAGCATCGTTTAacatttttcac taaaataatttattttttttgagaaattattcAGTGTTACTGTTGTCTTA TTTTTCGTCATAACTTTAGCGAGgataattgataaaaatcaGCTGAGATC ATTAATTGAGTTGTAAAAGTCATTAGGATATAGTGAAATATGAGGTTTTC TAAATATAATTGCGTTAATTTGATGgactttttcaaaatcaaacattttt ctGGGGCACCCGGTAGCAATGATATGACTTGTAGTAGGAAAATTCGGGTG TATCATCTTGAAATACTTCGAAATAGCATGGACGAAGTGTATAATTCCAA ATTTCACTCAAAGTAATTGATTATCATTGCTCAAGGTAACCAACTAGCCA GAcatgcggcccttaagggtgcttttttcaagctttccaaagtgcactgt aagggtcgaaatgggcaaagatgagaaaaagtgcaCTCCAAGGgtgtgaa atttgaaaatctgacCAAGTATTTTGccttaaattgctcaaaaattctCA ACCACCGTAAGCGTCGATCGCCCAAATTAtgtcaaatttggctaaatctt ctctgcactgtaagggtccgttTTCAAAGGCCAAGCTTTGGACCGCATGC TCGGTCGTCTTTGAATCGCGTGCTCCCCCCCCGGGTATACTTAAAACCTC CAAAAGATAAGGTCCCGTAAGATAAATGAATTGAGGCGTGCAAATTTAAA TGTAAATTCTTACGCAAAACGCTCTTGCCCAGATAATGTTCTTAAAAGac gtaatttgtaaattttattgataattttgaGTACACCATCTTAAAAATGC CTCGTTTAGAGTCTAACTActaataaattttctttaaaaaaaaaaaattt tcatgagtTTATCAATTATTTTACTCTTTAccattaattttattttaagg tTTCGAAGATACAAGATGTATGCTGTCCGAAATCCCAAAGGAGGTGGAAA CTGACAAGTTAAATGAGATTCTaggtatatatttttcaatttttagtctT TTTACCTACTGTAATTCTTTTGATGAAATGCCATTATTGACAATAGATct atcttatcggagttttctaaaaaagtgatgcattgtggggttgtttcggg ggtattacaatagaaatacccccgaaacaatcccacaatgcatagctgtt ttagaaaaatccaaAACTCCGTAAGGTCTATTAGGCAAAGCCTTTAAGAA ATTTTGCTTACaagaaaatcttaattttcGCCGAATAAGATTCCTTATTT TTTACCGTCTTCGATTTTTAATCGGTTTTGATACTCGATTTAttttaaaa gtagatttttaggaaatactCGAGTTTAtagttttcttgattttaccaaa agatttttaaaatcctcttgattgatattttta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001590TCONS_00001590Clytia hemisphaericatranscript
TCONS_00001591TCONS_00001591Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001590-proteinTCONS_00001590-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:633542..645024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05 1.89 1.14 0.78 17.41 13.72 10.47 11.33 4.61 7.14 5.8 3.97 3.89 3.88 3.83 5.38 6.02 5.61 3.99 4.42 4.52 4.39 3.55 4.89 12.19 12.07 4.34 3.18 5.44 5.5