XLOC_000642 (gene) - C. hemisphaerica

Overview
NameXLOC_000642
Unique NameXLOC_000642
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:721829..729862-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000642 ID=XLOC_000642|Name=XLOC_000642|organism=Clytia hemisphaerica|type=gene|length=8034bp|location=Sequence derived from alignment at sc0000007:721829..729862- (Clytia hemisphaerica)
GCCAGATTCATATAGCAGACTGACAAATAATCTGCTGACATGGCAACAGT TGGTTTGCTATCAAACTGATACATATCTCATTAAATAACTTCATGAGAGT CCATTTTAATTTTTAGTTTCAGATAATTAAAAAGAATGCCTTTAGAACAA GATGTATTGACAATTGGTCATCAATTGGAGAAGTTAGTCTCTGAAGGAAA ATCTGTAAGTATTTTGTTCTTTCCTCCTCTACTCTAATTCTGTCTTCTGT CTAATGAACTGGAGGAAACAGGTGTTATAACATAAAGGGACTGAAGATAA GGTCATGTAAGGCTGTTCTTGTAAACTTATTTACCTATGAAAAACTGACT TCATTTTCAAGAGGATTCAAAGCTTGTATCTTTTTAAAAATACATGCTTT ACTCTGGGTTGTGGGTGTTTTGATAATGAAACTTCGTTACAAGTTACAAC CCTTTTTTTTGGGTCAGCAAAACTTCAAAACTTTTCTTGCCATTTTATCT ATCTCTTTTATCTTAATTTCTTCCAACGACATTTCATTTTTTAGTTGACT CTTTTGGACAAGACTTTTAGAAAGTGAAATTGATTTTTTAGGACAATGAA ACAATCAGCGACTTATTAAAGAGATTGAAAGAATTACCAATCACATTAGA CATCTTACAGGTCAGAGATATTCAGATATTTTTCTGTTTAGCCAAAATTC TCTTTCAGTCTTTCTCAACCCTCATAACTTCTTCGTTTGTAATCTCCATA AATTCATTATTCCACATTTACAAACAAAAAAACGTGAACATAGTTCTCTT GAACACTCTTGATTAGTTGCACAATTTTAGGGCTCACTTCTCTAGTAATT ATTTAAGAAAATTTATCTTGGAATTACAGTCAATGCAGGAGGGAGTCGAT ACTGAAATCTCAGATATCATGTTGTTTAGTGACGTGATGGTACACCCAAA AAAACTTAAAAAAACTTCTGAGAAAAATGGTCCTGAGAAGACCAAAATTG GATGGTCTACGTGTAAAAAAGTCCCCAAAAGTTTTAGTTCATTTGTACTA AAATACAGCATTTCTAGAATTCTTAAAACCCTTATACATGTCAGAGATTT TAGTACCAACCACCCCCTGGTCAATGTTGTATGTAAAGCCAGCAAAAAGA CTGGTGGAAGNGTTTGTAATCTCCATAAATTCATTATTCCACATTTACAA ACAATGACGTAAACATAGTTCTCTTGAACACTCTTGATTAGTTGTACAAT TTTAGGGCTCACTTCTCTAGTAATTATTTCAGAAAATTTAGCTTGGAATT ACAGTCAATGCAGGAGGGGGTCGATACTGAAATCTCAGATATCATGTTGT TTAGTGACGTGATGGTACACCCAAAAAAACTTAAAACAACTTCTGAGAAA AATGGTCCTGAGAAGACCAAAATTGGATGGTCTACGTGTAAAAAAGTCCG CAAAAATTTTAGTTCATTTGTACTAAAATACAGCATTTCTAGAATTCTTA AAACCCTTATACATGTCAGAGATTTTAGTACCTACCACCCCCTGGTCAAT GTTGTATGTAAAGCCAGCAAAAAGACTTTTAGGTGGAATTGAAATTCAAT TATCCTTATCACATATGTGTTTTTGTATTTCAGAAAACTCGTATTGGAAT GACAGTAAATGTTGTACGTAAAGCCAGCAATAAAGATGACATTCAAACTG TTGCAAAAGGTTTAATCAAATCTTGGAAAAAACTTTTAGGTGAGAAGGAA ATTCAATATCCTTAGCTTGAAAACTGCCCTTAACATCAGGAAAGGCTCTG ATCAATACATGTGTTTTGAATTAGTTTCTCTGTGAATTTTTCAAGGAGTT TTAAACTTCACTTTTGAGAAGAATCTGGGCTGATCAAGCCATTATGTATA ACATTCCTCATTTTCACTAACACATAGATACACAAGATAAAGACAAAGAA AAAGAAAAGGAGAAACCAAAAGTGAATAAACAAACGTCCCAGGAGAAAGA AAGCAAGCCTGCACCACGAGATTCAAGAGCGGATTCAGGTGGATCGTATG AAGTACCTCCACCCAAAGGAAATGATCCAATACGAATACAATGTCGTGAA ATGTTGGTCAAATCACTCAAACTGGAAGGCAGACCAGGTTTCTTTGTTTT CTCTTAATACTGGATAGAAAAATTTCTCTTTTTTCTGTTACTTCTCTCCA ATGCCGTTTGAAGAAGTTTTTTCTTGCAATTTAATTCAAGAATTTTGATC ACACAAATAGTCAAAACTTCTAGGAAAGTTGGAAATTTGTTGTAATTTGT TCAATTTGCCTAATTTGCCTAATTTGATGACCAAAATCACACATCAACAT TAGCTGAAGTTATCTAATTTTATTGTTTTGATTGCAAATCTCGAAATCCT TCAAAATTCACACAAAGATTTTTCCTTAAAGAATGGCATGAAAGCTTTTA TAATCTATATATTAATAGTATAACGCGTATGTCATTTTGTTTTCTGTCTG TGTGTCACTTTCGATTTCGCAAGCAATGTTTTGTTCTTGGTAAGTTTGTT TTGATTGACAGATCGGATAGAGCCTGGTTTAGACTTTATTCAGCCTTTGT TTTGAAATTTAAGGCCCGTCTACATTTAGTAATTATAATTTCTGCCTAGG CATGCCCGTTTTTCGTTTTTCTCTTTTCTTTTGTTTTTCTCTTTTCTTTT GCTTAAATTCTTTTCGAATGTAATTAACGATCGTATTTATTAATGACATT CGAATTCTTTTCAAAACAAATTCCTTTTACAGAAAAGAATAATTCAAATG TAAATCAAAACATAACAGTCAAAAAGTTTGTCAAACCAAACAACGACAGC ATTCAAAAGGCGATAAAAAGCAAAAAGAGAAAATTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCAACCTCTTTCTTCATATAAAAACATTCAAGTC GTCGTTACTGTCAAAAAGTGTGTACGTCATTTTACATGTTTAAATTTGAA AAGTGGCTGCGTTTAGACCAACGCAACTGGCATTTTTAGTTTGGCATTTG CTCATGAGGGGTTCGATTTTAATAGCTTTTCCATTGTATTTTCTGTCATG GCATTTAAGGAATTTTTAGAGTCATTACTGAAAAGGTGATTCCCTCAAGT TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNACTTTTGACTTAAACAAAAAATTCGTCTACATCCAAAGGACT TTTATTGCGTTCAGCTACAGCTTAACCGGCGTGCGACGCCGGGTACCGGC TAGTTACATTTATAATTACATTGTAATTACATTTTTATAAAATTTTATAA AAACTTTTGAAAAATATTCTCCTACAAAAATACAGCCAAGTACAAAATGC AATTGGTTTAATTTCCGACTGATGTAGCCCTGAAATGAAGCTTTCAAAAC TCTGAACATAGGAATTAAAAATACTCTTTTTCTTTTTCTCCTTGGGGCAT AGGCCCTGAAGACCCCTAAAATGCCAACTCAAATCAATCTGAGGCGGTTA TTGCCATTATGTATTTCCCGTTAATCATTACATGTTGTACGTTGTTCATT ATACATTATGTATTATGCATTACGCAAAAGATACAAAGAATAATATTTTC TTTTCAAAATACACAAGGTGATTTTTCTTCCTTCATAATAATTACTCAAA ATTTATTTTCGTGCAAAAAAAATATTTGCATGGAAAATATTCTTGCAAGA ATGCCGAAATATGTAAAATCATTTTCGTCATATTTTTTACGAAAAATACA ATGAAAAATACACTTTCCTTGAAACATATATGAAGCATTTTCTCCAAAAA TACACAAATGGAATGATATTGAAAGAATGAAATTTTTCCTTTAAGATTAC ATTTTATTTATCAGAACTTTTCCCTCGAAAATACACAAAATGATCTTCCC TGAAAATTACTCAAAAATCCTTTTCCTACCAAAATACAAGGAATTATCTT TTCCTTCAAGAATACATTAATACAATCTTTTATTTTTTAAATTAGTGTAC AGTAAATCATATCTGCAAAAATAGAAATAATTTCAAAACTACCCAATATA TTTTCTTTCCATCAGAATTTTTACAGGGACGGCTTATTTTCTTATGCATC TTGGTTAAAATCATTTTGAAATATTACGAAAAAAGGAGGTGATCGGCTTA TGACCAATGGTTATTTATAGNTTATGCATCTTGGTTAAAATCATTTTGAA ATATTACGAAAAAAGGAGGTGATCGGCTTATGACCAATGGTTATTTATAG TTCTTTTTCTTTAGAATTCAACCCAGCATACATAGCAGCTGATATAGAAG AAGCAACGTACCAAATGTTTAAAGACACTGGTTCAAAATACAAAAATCGA ATTAAAAGTCGTGTTATGAATCTACGAGATAAACGAAACCCTGCTCTAAA ACAAATGGTGGCGGAGGGTGAGATTTCACCCGAACGATTCGCCAATATGA CGGCTGAGGTATAACTTTTGGAATACGGTGCGACCATACAACCTTCTAGG ACTTCAGGCCCTAACTTATGTTGAGTAGGTTTAAGCATTACAAACATTAC TTTTTAATAGACAATGAAATGCCTCGTTATTCTTTATTAACTGTTGTTCT TATGTGATCAGCCAAATTATTATACTGCGTTTGATTGTAATGTAAACGTG ATAGAGTTAATTTAGATTATCTTTGTATCAAAAGGAAATGGCGACTGACG AATTGAGAGCTGAACGTGAAAAGATGACCAAACAAGCGATCAACGAACAT CAACTAGCCACGTCAGCTGGTACAAGCACTGGTCAGTTCAAATGTCATCG CTGTGGTAAAAGAAAAACCTCTTATAGTCAAGTAAGTGTGACATTGATAT TTAAAAAGGATTAATCGGGTATATTCAGATGCCATCATTTTGCTGTCTAA AAATAATGTTTTCTTTATGTTGTGCCAGTCATTGATCATGGACAATTTAT CGATGTAGCTCAAATCTTTCCCTCTTCTCCGGACTTTTCCTCCGCAAGTA ATCTCATAAATCTTTTCATGCAAGGGATTTAAGTCTTCGAGGATGGGCTT TATAGGGGGCTGAGGTTCCACTTTATCGCCCTTGGCAGCCCTTCGAAGAG TTTTTGTATTATACAGTTTGTGAGCTACCTCCACTGTAAATTGTACGGAT AGATTTCAGGGATTTGGGGATGAATTATTAATCGGGCTTCTCTACTATGT TTTTGATGTTTGGATATTTTCTTCTTCTTTTTCACACCAGGTACAAACAC GTAGTGCGGATGAACCGATGACCACTTTTGTATATTGCAACGAATGTGGC AACCGGTGGAAGGTACTCCTCTTTCTCTTAGTTTCTCTTACTTTTCATCT TGACCCTTTGAAAGAGAATACTTGTGAGTAAAAGATTAAATGTATAGGAT AATTACATTTTGGCTTTCACTAGCTCCTGAAAGTCAACTCATGATCAGAT CACTGTAATTCTTTTCTGAATGAATGGAAATTAGCTAGAATGTTAAAAAT CATTTATTGATTGGTTATTGAGAATTGCAATGAATTAACGATTACACCAT TTTTGGAACACCCCGGTGGGGTGGAGGTCCTATAAATTAACCTTTGTCCG TTCGTCCGTTCGTTCGTCATTAGCTTCCTCGTGATTGGCTCGTTAGTTTT TCTGAATTTTTGCACAAAGATGTGTAACTATAAACCCTCGAATGTGACGG AGCCCGATTTTCGAAAAAAAAAATTTGGGGGCAAATTTGGGCCAAAAAAC GGCTAAAAAACGGGTTTTTTGGACTCTGTGAAAAATTGGATCGTTAACTT TTTCTAATTTTTTGCATGAAAGTAGGGTACTATCACAGGTAAAAGATGGC TCAAGCAGATTTTCTCAAAAAGATTTTTTTGGCTCAAAAAACGCATGTTT ATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTTAAAT TACTCAATTTTTTTATGAGATGGATGTTTTTTTGCTCACAAAGTCTTGAA TATGAAAGAATATCTCAAGAGCATGAAATTTTGGTTTTAAAACGTTTTTT TTATAAGAAACAGACGACTAATTTTAATAGATCGTCACTATTTGTGTTCT GAATGATTGTTTAATGGTCACGCTCACGTAGANGACTGATTTTAATAGAT CGTCACTATTTGTGTTCTGAATGATTGTTTAATGGTCACGCTCACGTAGA TATCAATTATATATGTGTTAAATACATAACTAGGTAGGTCCATAAAAGTA TCACTTGTTTGTTTACAGTTTTGCTGACACCGGATGCACACATTGCCAAC TATCAAAGAAACAACACAGCACACTTTGTACATATTCCTCGCCCCTAATT TTTTAAACCGTGTTCTTCTTTGAAACATAAAATTTTATACAAAATAATCC AAAATGTTTGATACTTTTCCGCCTACTAAGATTGTCTATAAGATAATAAC GAATTTTGACTTTGTTTGTCGGTAGAGTTTAGAGAAATTTTGTACAATGA ATTTTCAGAACATTAAAAAGTACCCTAAATTTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001182TCONS_00001182Clytia hemisphaericatranscript
TCONS_00001181TCONS_00001181Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001182-proteinTCONS_00001182-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:721829..729862 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TCEA1transcription elongation factor A protein 1 isoform 1 Homo Sapiens
TCEA2transcription elongation factor A protein 2 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
53.41 43.43 112.13 129.3 71.45 58.76 58.65 59.41 52.25 45.32 48.06 49.46 43.25 52.63 47.06 40.02 54.28 57.47 46.28 37.88 45.6 43.37 74.59 67.17 56.85 59.57 37.38 38.32 32.1 39.95