XLOC_000128 (gene) - C. hemisphaerica

Overview
NameXLOC_000128
Unique NameXLOC_000128
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2012904..2021564-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000128 ID=XLOC_000128|Name=XLOC_000128|organism=Clytia hemisphaerica|type=gene|length=8661bp|location=Sequence derived from alignment at sc0000001:2012904..2021564- (Clytia hemisphaerica)
GGCTTATACTTTTCTGTGTTATTGTTGTAATGCTCGAGTTTTCATCCCCC ATGCCTTATTTTATAAAGAATTATTTTATGATATTTTTTTTTTGTAGATG AATCCTCAAACAAATACTAACTCTAACAACACACCCAGCAGCATTCTCTA TGAGCTGGCTAAAAGTAACAAAATGACCACCAACTATCAGGTGGTCAGTG AAACTGGACCAGCACATCAAAAAACGTACAAGGTTCACCTACATGTTGGC CATGCTGGACCATTCGAAGGAGTTGGAAGTAGTTTGAAGATGGCTCGCAA TGCCGCTGCTTCTAGGGCATTATCTGATAGTTTCCCTGGATTTCACATCA ACCCTACTGTTGAGTTGAATATTTTATCTATGAAGAGTCGTGAAGTTGCT GTCTATCGGGAATTGGAGAGTATGTCTTTGCCAGGTTCAACTACCTCACG ACATGATCAATATGATAGCTTATTTCTGTCACAACAATACCACAGTGGGC TGATGCACCGTGGTGGACCCCGAATGAACCACCATAAACAACGCCGTCTA TGGAGAATGTCTGTAACAATCTGTGGCCGAACCTATATTGGTGAAGGCCA CACAAAATCAGAAGCACGGTTTAATGCTGCAGCCCATGCTTTGAGGGAAC TGAAACAGATTTTGTTAGAAAAAGCCAAACTGGTTGAACTTGAGATGTCA AAACAAAAGCAGGCAGCTGCTCAGAATGGAACTGAAGGCAACCCTGAAAA GCCAAAAGCACCATGTTTCGTTTCTAAACTTCATGAACTGGCCAACAAAC ATCATATGGAAATCGATTTTAAACTGATGAATGAGTCAGGACCACCTCAT GTTCGCGTCTTTCACATCAATTGTAAAGTGGGCGATCACCAAATAATAGG TTTGTTCTTAAAAAATTTATATACAGGTTGCCTATATGTAATCGAATCGA ACTGATGTAAAGTTTATTTCAATCGAAGGCAAAAGCTTTTAACAATGAAG GGTGATAAATAATAAATAATAATTCTACAACCACCCATTGCTGGGTATGG TTGGACATAGAGCCATAACTCTCGTCTGTGAGGCCTACTCACTTCTGAGA GCCATGACTCTATGTCGAGCTATCAAAATTTTAGAAATTAAGTTTTCTTG CTTAAGGCAAGAGTGAAGTTGCTAAACTGTTGCTAAATTTTTGTTGTTGT CGAATGATGCAGAAGTTTTCCTGTACAACTCCCTGTATAAAAGAAAGAGA TTAGCCTAATTTGGTACATATTGTTATTCTTTCTCAAGATTAGATTATAG CTGTATTATCTTTGCCTTGAAGTCTTAAAACACTTACTGTAGTAATTTTG AACTTTTAAAGTCTTGAATCTTCCAAATTGTTTACTTCCAGGATGACTTT AATTCACCTTAAAAAATATCTTTATATATTTAACATTAGACTACTTTGAT ATTTTTTCAGGGCAAGGTATTGGCAAGAAGTCGGCAAAGAATGATGCTGC ACAAAAAATGTTACAAATTTTGAAAGAACTTCCCGAACCTGAAAAGAAGA AACCTGGTAAAGATTTCTTGAACTTCTTTATTTCGTCTAATAATCTGCAC TTTCTGTTTTTACTGTAATAATGTAATAATGTACAGAAAAGATATTAAGA AAATTTACAAACTGTCTAGAAAATAAAGCATTTCAATCTGTGCAGTTGTC AGCCAATCAAACAGTTTGTTTATTAGATTAAAAGATATCTCTGCTACAAA TCACACCAGAGAATATCTGTGTATTTAAAAGTTTTCTTGACTGTTCAAAT CTTATGGAACGCACGGTATAGGGATCTACGTTAAAAATGGATTTTTGGAA TCATAAACTGATTACCCCTTCAAAATGTGCCAAAACATGTATAATTTCAG AAAAAGTAGAACAATTTCGGTAGAAACCTTTTTTGACTTCCCTACCGGGG CCTTTAAGGCCACGCCCACCTCGGAATNCCCCAATATCACAAGTCATTGG ACTTTACTGCTCCCCAATATCACAAGTTTTTTGACTGTACTGTTTCATAC TCTTGACCTTGTAAAGGAGAGTTGAGTTCCAGTGTTAGTGATTTACTATC ATCCCTCTTACCCCCAATTCCATGTATAACATTTCTAAGATCTCCAATAG TTGTCTAAGAGCAACAACGTCAATACTGAGGTAAGAGCTCAAGTTTTCAA CATACTCTTCTNTAAGAATTCTCAAAAACCTATCAAGTTACCCCTCATTT GAAAGGTAATTTAATGTAGATTGAGAAAAACATCATGACTATGCATCAAA AATGAAGTGATAGGTTGTAGAGTACATTACATTGCTCTTGAAAGAGGCTT TTTTAGTGTAATCGTGTAATGTCTTAAAAAATTCATACTTTTGCAATTAA TTCNCATGTAATTTTGGCATATTTCACTTCATTATACATTCTTTTGTTCT TAAGTTTATCATCCAAGTTTGTTTCTACATACTTCTTAAGTAATTTCTTC TTCTGAGTTATATGGGCCTGAGATAAGTCTCCAATAATNGTTCATTATAT TTTTTGGAAGACCCACATGAAATAAACATAAGTGCTTATTTTCTACTGAT ATCATACATTTTGAATCTACAGGATCATTTTAAAAATTTAAAAACTATAA AACCAANTGACTCTTCACTCAAACTTGCCATTTCTTTTTCAGTAAAGGCT TCAGTTTTCTGCTCCTTGACTTTATCAGCCTATTCAAGTTTAATTACCGT GATTTCCAGTGATTTCTTTGGAGGGTTTTATAAACTTTTTAAAGTTATTT GGATTTGTTTGCTCAAGAATGTCATGTTTTTATTGAGTACCATTTTCTTC ATACATGTACTTANAGAAGACCAAAGACTCTGGTATTGATCCCAGTTTGA ATGCAGTATCATACCTCCAGTGTATGATGAACATGAGAAAAGAGTCACCA CCTGTTTACACACTCAAAGCTGATGCTGGACCAACACAAAAAGGCTTGAT GAGATTCCAAATCGAGGTACCATTCCCTTTGTTATAGCTTTCTTTGGTCC TGTCCTTTATAGATTTATAGGTTTGTGTATACGTTTGTTGATTAAGAATC ACTCATCCTTTAATATTGTTGTATACTACTTTAGGACATATTTTATCCTC GAAAAAGTTTTGGCTTCTTATTTTATTGACGTAACGTCCGAAATTGTTAA AGGGATAATATAATGATATTTTACCTGTAAATTCCGTTCAAGGTCCTGAG CAAAATCTCTGAATCGTTCTGCCTTTGTTTGACTTTTAGCAGGAAACAAA TATAATTCTAACGTAAAAACCGTGTGAAAACCCATCTTTATAATTTCACA TAGTTGTTTCTCGACTTTGGAAAGGAGTTAAGCAAAAAGATTTGAAGGTT ATACTCAGGGCCATGTGAGATATCTACAGGCCAAATATCTCAAACCATCT GATCATCCCTTTAAAAGGCATTATCAATTGTAATTCACGTGTTAAATTTT TTAATACATGACACTCATGACATAGGGGTTCCGCATGGTTGCAAAGAAGA GCGCTTAGTCGACGCTCTTTAATTCGATTTCCAAGGGGAAATTGGATTTT CATCGAATAAGAGAGCGTGTCGAATAGTAGAGCGTTGTGTTTATCAGTGT TTCTTATTGATGGTAGCCTTCAATGTTATCGAAGGGAGTGTCAACTGCGA ATGGACTTTAAAATCTCCTTTAATTTCATGTACAGGCTTCATTGGAGGAT TTCAAAGCCATTGGATATGGTCAAACAAAGAAAGCAGCCAAAACAAATTC AGCAACTAACCTATTGAAATGTCTTGGTATTGATTTAATCGAGTTGAGAA AAGAAAAGGGTGTAGCCAAGGTATGGTTTTGAATTCTATTATTCTAGTCT GGTTGTTTTAATTAGACTAGAGTCTACTTCTGATTGAACTTTGCTTGCTG ATTTTTTTGATGACGCTGAGTCCAGTGATCAAGTTATATGAAAGTCATAA GTGGCCCTGGGTTAACCTATTCCTTATTCATACCAGTGCTTTTCGAAAGA TTTCTCGCCGTTCATGCTATTCATTATTATCAACTTTATCATCCCTTCCG TGGTATCTAGAACAATGCTATGAAGCGTTTGGGTGTATTAAAAGTAAAAG CTTTCGTACTAAAGATGCCTAGCTTGCTTAATTTTGTGAAATTAGAAATT GTTTCGAGTTATTTTTATGTTGAAGATGACGATTTACAGGTCAATATTGC CTTTTGTACTAAAAATAAATTTCGTTTATTAACAGGTGGAAAGTGACGAT GAAGATGAGAGTGAAATTATAAATATTGCACTCGATGCCCTCATGACGGA AACCGCCAACTTGAACCGGGCACCCGGAACTCCGGTCAAGCACAAAATCC AACTTAGCAAAAGCAAACCAAGTGAGGTGGACCAATCTTTTCCGGCTGCG TCTGCCAAACAAAAAGTTGAATACATTGCTCGCAAGGAAGGATTTCAAGT TTTGTACAATGATTTCGTCAATGGGGTTTGTATATTCGATTTAATACTAC AGTTGAGTCTCTTTAATTCGAAAGTCTCCTTAACTCGAACAAATTTGTGT TCCCCGTGCGTGTTCAAGTTATGGAGAGTCCATTGTATTTTCCAAAACTC ATACTGATATACGTCTATGTAGGTCCATGTCTTTTGGGATCCTAAAGATC TAACTGCCCTAAATTATCAGATAGTAATTATGCCTGGGCTAGCACTAAAC TTTAGTTCATGCCATGTGATAAATTCTGATAATGCCAGATGCCAAAACCT AAGAGTGGAAAAAGTAAGAGTAGATTAAGAACGACTAGGAACTCGGATTT CTCTTCACGTTTATAGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAGC GATGCATTGTGGGATTGTTTCGGGGTATTACAATAGAAATCTCTTAGGAA TTTCTCGAGGGAATTCTTTTGTAATACCCCCGAAACAATCCCACATTGCA TCGATGTTTCAAAAAAATAAAAAGACTCCGATAAGGTCTATACTACTCAA TCTTCTCTTCCTCCCAGGGTAAACCGGGTCAAAGCGACAACAATGAGTTT TCATCTTCACTGGCCGTTTTCACGTCACCGCCGGAAGTTTTCCACGGAGC CGGTCAAACTGTAGAAGCGTCGAGAGAAGAGGCCGCGCGGAAGGCCTTCA ATTCTATGCAAGCTGTTCCAGGCGCCAACGATTCGGCCGCTTCACCTAAT AGTAAATAAGAAACGGTACATTTCTATTTCGTTCTCTCTCCTTGTTATAT TTTTTTCTCTCCATTCATTTTTCCCTTTTTTTCCTTTCCTTCAACAAGAT CACTTTTTTAGTTTANTATATTTTTTTCTCTCCTTTCATTTTTCCCTTTT TTTCCTTTCCTTCAACAAGATCACTTTTTTAGTTTAATCTGCAGAATCAT GATGGGGTACTCGGTTCCTTTCAAGATTAATGTCAGCCTTTTGGACCTCG ATTCATCAAATGCCAACATCTTCTAATGACTTCTTATAGAAAACCTTTGG TTTTGTAGATCTTTTTTCGGCACATATCATCAAATTAAGATGTTATTTTA ACTTCATGCTTTTCTTTTAATCTTCTTTCGTTCAGAATTGGATCTTGAAA GTACTTGAAATCGAAGAATCATGACATATGCAAAAAAGTATTAGGATCAG TCGGGTAACTTTTTGTCATTTGTTATTTTTGTTTGTTTTTTTCTGCTCTG TACTACAGCTTGTTTCAAAGTTGATTTTTGAAACAGTGACTGATNCGTTT ATCAGTGTTTCTTATTGATGGTAGCCTTCAATGTTATCGAAGGGAGTGTC AACTGCGAATGGACTTTAAAATCTCCTTTAATTTCATGTACAGGCTTCAT TGGAGGATTTCAAAGCCATTGGATATGGTCAAACAAAGAAAGCAGCCAAA ACAAATTCAGCAACTAACCTATTGAAATGTCTTGGTATTGATTTAATCGA GTTGAGAAAAGAAAAGGGTGTAGCCAAGGTATGGTTTTGAATTCTATTAT TCTAGTCTGGTTGTTTTAATTAGACTAGAGTCTACTTCTGATTGAACTTT GCTTGCTGATTTTTTTGATGACGCTGAGTCCAGTGATCAAGTTATATGAA AGTCATAAGTGGCCCTGGGTTAACCTATTCCTTATTCATACCAGTGCTTT TCGAAAGATTTCTCGCCGTTCATGCTATTCATTATTATCAACTTTATCAT CCCTTCCGTGGTATCTAGAACAATGCTATGAAGCGTTTGNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTGCATCGATGTTTCAGAAAAATAAAAAAACTCCGATAAGGT CTATACTACTCAATCTTCTCTTCCTCCCAGGGTAAACCGGGTCAAAGCGA CAACAATGAGTTTTCATCTTCACTGGCCGTTTTCACGTCACCGCCGGAAG TTTTCCACGGAGCCGGTCAAACTGTAGAAGCGTCGAGAGAAGAGGCCGCG CGGAAGGCCTTCAATTCTATGCAAGCTGTTCCAGGCGCCAACGATTCGGC CGCTTCACCTAATAGTAAATAAGAAACGGTACATTTCTATTTCGTTCTCT CTCCTTGTTATATTTTTTTCTCTCCTTTCATTTTTCCCTTTTTTTCCTTT CCTTCAACAAGATCACTTTTTTAGTTTAATCTGCAGAATCATGATGGGGT ACTCGGTTCCTTTCAAGATTAATGTCAGCCTTTTGGACCTCGATTCATCA AATGCCAACATCTTCTAATGACTTCTTATAGAAAACCTTTGGTTTTGTAG ATCTTTTTTCGGCACATATCATCAAATTAAGATGTTATTTTAACTTCATG CTTTTCTTTTAATCTTCTTTCGTTCAGAATTGGATCTTGAAAGTACTTGA AATCGAAGAATCATGACATATGCAAAAAAGTATTAGGATCAGTCGGGTAA CTTTTTGTCATTTGTTATTTTTGTTTGTTTTTTTCTGCTCTGTACTACAG CTTGTTTCAAAGTTGATTTTTGAAACAGTGACTGATGAACATTAAAACAT TGTTCAAAGGTCTCTGTATTTTTATTCTGTCGTTCAACTCGAGAGTTGGG TTGAACTAGTTTGCTTACACTTAACCTCGTCCCCAGGGTATTATCAGCTC ACTATCACAAACGTGGGAAGAGAATTCTCTGGCGTCCATCAATAACACAA ATGGGTAAAGCCTGGGATACACGGGGACGAGGTTGGTTAAAATGTGGACA TTTATTTATAACGTAAACCATGCGCGACTGCCTCGATTTATTTATTACAA TGAATTTGATAAGGTGAAAAGAGAAGCTTAAACTGTTAAAGTAATCCTGT GTTTTGGAAATTCATTATTCTTATTGACCTATTTCTTGTCTGGCCAGTGC AATGGCTACGTTATATCTGTCCTTGCTGCAAGAAATTTTGACAAGAACTG GACTTAACCAGTTCTGCCAAAGTTTCTTCCTGCCGAATTTTCTAATATGA AGTTAGGCTTGTGTGTTTTTGACACAAGTTTGACTATTTGGTTTTATTTG TGCTTGTTTGTAATATTTTGGTATAGTAAGATAATATTTTTTCGTTTTTG TTATGTTGTGTTATTTTGAAATGAAGGGTCTAGATGAAGCACCTGGCCAA AGAGAGAATCTTCGATGAGAATGATCGATGTGCAATTTCTTACAATATAC ATTTACCTTTCATTATGAAATGAAACTCAGAAACAGCAAAAGAAAAAAAA TGATAAAAAAGACCCGAGTCTAAACAAAAATATACATGTTCTTATTCAAG GACATGGTGTAATTATGTGAAAGTTTGAAGTCAATAATCTTCGTTTCTCA ATCCCCTATTCCATATGGAAAATGTTCTTTCATGGTCAGGAATCCCATCT ACACTATTGTCATTTTCTTAAAAAGATTCAACAGTCAACTCTCCTTAATT CGAACTTTCTGTAATTCCTTCGAAAAATATTATCCTCTTTGGCTAGAAAG TCCTCCAAAATAATACTCTCAGTAATTCAAATCTTTCTGTAATTCGAAGA GATCCCTTTAAAATCGAATTAAAGGGTGTCGACTGGTTCATTAAATTTTA TTAATTTACATATTTTGCAAATTGTATTATTTTTCTCCTGAAACAGCTTT TTTACTATGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000232TCONS_00000232Clytia hemisphaericatranscript
TCONS_00000231TCONS_00000231Clytia hemisphaericatranscript
TCONS_00000230TCONS_00000230Clytia hemisphaericatranscript
TCONS_00000229TCONS_00000229Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000232-proteinTCONS_00000232-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2012904..2021564 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.7 5.94 4.36 4.83 45.7 36.07 22.81 24.2 16.33 18.49 15.89 13.13 12.65 12.03 17.89 19.08 21.36 20.53 10.06 12.35 12.04 12.84 13.18 16.97 13.12 14.86 12.91 9.45 14.43 13.06