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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97434_cuf2 >transcript:BL97434_cuf2-protein ID=transcript:BL97434_cuf2-protein|Name=transcript:BL97434_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=167bp
NLLAKNLREEAHVMLQIQTENVVKLIGVCIDKGHYSIVMEYMPRGTLPHV
LQTLDRPLSWPERLLMCLDASRGLRTIHHPHGGYPARLHGHLSSDAFLVN
NDLRVKLSDFCTTKTRSSIKKKGRRGRRSTVAYLAPEHLQKIHEAPDYSS
EVYRYVIMEYTCTNNKQ Run BLAST on NCBI mRNA from alignment at Sc0000402:176534..179457+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97434_cuf2 ID=transcript:BL97434_cuf2|Name=transcript:BL97434_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2924bp|location=Sequence derived from alignment at Sc0000402:176534..179457+ (Branchiostoma lanceolatum)
CCAATCTTCTGGCTAAGAACCTGAGAGAGGAGGCACACGTCATGCTGCAG
ATACAGACAGAAAATGTGGTGAAACTGATAGGAGTGTGCATTGACAAAGG
TACATACATGTTTGTAAGAACCTCTCTATTGACTTGTCCATCCATCTTTG
GATGGAAACTTTAGATTTCACACAGCTTATGTTTTGCTGATTTCTCACAC
TCTGTCACAGCACACTCTCTGTGAAGAGAAGCTACCTTCTCAACACTCTT
CAAAGTTTTCTGTTGATAACTTGCATTTCACTTTATTTTCCCACTCAGGA
CATTATTCCATAGTCATGGAGTACATGCCTAGAGGAACCCTTCCACATGT
CCTGCAGACTTTAGACAGGCCGCTGTCCTGGCCAGAACGTCTCCTGATGT
GTCTGGACGCTTCCCGTGGTCTCAGAACAATTCACCATCCTCATGGCGGC
TACCCTGCCAGGCTGCACGGTCATCTCAGCTCCGACGCTTTCCTGGTCAA
CAACGATCTCAGGGTCAAGGTTTGTGCTGTATTCAATTATTCCGAATAGG
GGGCTTTATACAACAAAGACGTATCTTCCATGGATATGTGTGCATGGCCC
AAATACATTTGTTCATGTATGCTTAAATGTTTTCACACAGTCATCATCCA
ACACCTTGCTTAAGAGAGTATGACATTACAACCTATAGGGATATTGATTT
TTAAAAGATGTCTTTGTTTTACACATCTGTAGCTGTCTGACTTCTGCACA
ACCAAGACAAGGTCATCTATCAAGAAGAAAGGTCGGCGCGGCCGCAGGAG
CACTGTTGCCTACCTGGCACCAGAGCATCTGCAGAAGATCCATGAAGCTC
CTGATTATTCCTCTGAAGTATACAGGTATGTCATCATGGAATATACTTGT
ACAAACAATAAGCAATAAAGATGGACCACTCAGAACCACCTAAGAAAATC
TGGAAAATGACATTAGGAGTAAGTTTTACTGCCCTATTGGTACTTTTTGG
CACCAATTTTGTATTTGTGCACTATAGTCTATAGCAAGTTTCAGTTCTAA
ATCTAACATGAATTCTTTACACAAATTACAGTTTTGGTGTCATCATGTGG
GAGATAGTATCCCAGAGAATAGCACATCAAGGTAGGAACTTAACTGCAAC
ATTCTACTTAGTAATATGGTAATTTAAGTGGATTCTTTTGAAAAATTTTG
GTGTAACATTAGGAACACGGAAAGTTTTCAAAATGTCAATAACTTGCCTT
TCTATTTTTTCCCTCAATAGAAAGTCGAGGGGTGGATGAATCAGCAATCC
GCAGATTTGTGCTGGAGGAAGGAGGAAGGGAAGACTTGCCAGCTGACTGC
AGTCCTCAGCTGAAAGACATCATAGACAAATGTAGAAGCCGTGAAGTGAG
GAATAGACCACAGATGACAGGTAAATATACTGAAGATAATGATGTCTACA
GTAGTGTAAGGGATTGAAGTGTCACTTGAAGTATCAACATCTTGGAAGTA
ATAAAGGTTTTTCTAGTAGTGCCAACAAGAACATACTTCTTGAGGTCTCC
TCAATCATTTTATTGGCCTGCACCAATGGTTTTCTGTCTCCCTCCCAACA
TCCTGCAACATTCCTGGCAATTTTGTACCATCTCTTACAGTTCAATAAGA
ACATGTACATGTAATAATTGTTTTTTGCTATGGCACAACTTTGCCAAAGC
AAAGATGATGTATTGACCTATAAAATATTACATTATTCTGAGAGTGTGTT
TTTTGTTTGTTTTGCAGCTGTAGTGACAGTTTTGGAGGCTCTCAGTGGGA
CTTGTTGTTCTTCTTAACAACTTCATTTTGCCAGGGACAATCGAAAATTC
CAGTAATGAAGCAGACTTCGTCATCTATACTAGAAAACCATTAGGAAACT
TACGGAACTCAATGATGATGTTTTAAAGGTGTATATTGTAAATAGTTAGG
AGTGCATGATAACTTTCTTAAAGTTTTATGTTGTAAATAAAGGTGTGCTA
TTTGTTTACTATTGCAGATCGTCCATACAAAAGCATGTTACATTCCCTAT
ACATGTATAAACTGCATTCTGATAGCAGTTATATTTGTGATTTGCCATGG
GATATTATCAGCATATCAAAGTGTGAAGTCTAAATACGAATGATTTTATA
AAATGTTACTGGTTCAATTGACAATATTACAACTGTTCAAGCCCACATAT
CTATAAGTTTGTCATCATGAATCTTGTACAATACATATAGTGTATGGCAT
GGGTCATTGAGAATGGTGGGTGGGGATGTTTGTTAAAATATTGTACATGT
AGTTAATGTTACTAATTGTTGGACCATAAGTATGATTTAGTAGCATACAT
AAACAAATTGGATTTCCATATTTGTATTTTATTGTTTGTGATAGTACTCT
GCTTGCTCTTAATTTGTCCCCAGGCCACCCGGCCCTGTCCTTCATAGTCA
GTCCTCTACAATGACATTCTATATTGTGAATATCTATGACTTCTCAACTG
TATATAAGCAATAAACGCCTGAAAAGAGAGACAATGTGAAAGTTGTGTCA
AAATGTGTGATTCCTGCCTTGCCCCTGGAGAAAATACACATTCTTTGCAG
TTTATGGTACATATAGTTGAAATGCCATGATTGAGAATTGAGACAAGCTG
AGTAAAGAGTGATCTGAAAAGAATAGATTTTGAAACAACTGTTCATACCG
ATTGTTCAGTCCTTAAGAACCAAGCAAGGGTTTTCGTCATACATATATAA
AGTTCAGCTCCCTCGGGGTGCTTCCCAGTCTGAATGAAATAAAAGTCCAC
CATTGCAAGCATGTACACTGCCTTGAGTTTTATTAAAATATTATGAATCC
AAAATATCATCAGTATGATTTCAGATAGACTGTACGATATCCAATGTCTT
GCCATGCATATATATTGAAAGTTG Coding sequence (CDS) from alignment at Sc0000402:176534..179457+ >transcript:BL97434_cuf2 ID=transcript:BL97434_cuf2|Name=transcript:BL97434_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1512bp|location=Sequence derived from alignment at Sc0000402:176534..179457+ (Branchiostoma lanceolatum)
AATCTTCTGGCTAAGAACCTGAGAGAGGAGGCACACGTCATGCTGCAGAT
ACAGACAGAAAATGTGGTGAAACTGATAGGAGTGTGCATTGACAAAGGAC
ATTATTCCATAGTCATGGAGTACATGCCTAGAGGAACCCTTCCACATGTC
CTGCAGACTTTAGACAGGCCGCTGTCCTGGCCAGAACGTCTCCTGATGTG
TCTGGACGCTTCCCGTGGTCTCAGAACAATTCACCATCCTCATGGCGGCT
ACCCTGCCAGGCTGCACGGTCATCTCAGCTCCGACGCTTTCCTGGTCAAC
AACGATCTCAGGGTCAAGCTGTCTGACTTCTGCACAACCAAGACAAGGTC
ATCTATCAAGAAGAAAGGTCGGCGCGGCCGCAGGAGCACTGTTGCCTACC
TGGCACCAGAGCATCTGCAGAAGATCCATGAAGCTCCTGATTATTCCTCT
GAAGTATACAGGTATGTCATCATGGAATATACTTGTACAAACAATAAGCA
ATAAAATCTTCTGGCTAAGAACCTGAGAGAGGAGGCACACGTCATGCTGC
AGATACAGACAGAAAATGTGGTGAAACTGATAGGAGTGTGCATTGACAAA
GGACATTATTCCATAGTCATGGAGTACATGCCTAGAGGAACCCTTCCACA
TGTCCTGCAGACTTTAGACAGGCCGCTGTCCTGGCCAGAACGTCTCCTGA
TGTGTCTGGACGCTTCCCGTGGTCTCAGAACAATTCACCATCCTCATGGC
GGCTACCCTGCCAGGCTGCACGGTCATCTCAGCTCCGACGCTTTCCTGGT
CAACAACGATCTCAGGGTCAAGCTGTCTGACTTCTGCACAACCAAGACAA
GGTCATCTATCAAGAAGAAAGGTCGGCGCGGCCGCAGGAGCACTGTTGCC
TACCTGGCACCAGAGCATCTGCAGAAGATCCATGAAGCTCCTGATTATTC
CTCTGAAGTATACAGGTATGTCATCATGGAATATACTTGTACAAACAATA
AGCAATAAAATCTTCTGGCTAAGAACCTGAGAGAGGAGGCACACGTCATG
CTGCAGATACAGACAGAAAATGTGGTGAAACTGATAGGAGTGTGCATTGA
CAAAGGACATTATTCCATAGTCATGGAGTACATGCCTAGAGGAACCCTTC
CACATGTCCTGCAGACTTTAGACAGGCCGCTGTCCTGGCCAGAACGTCTC
CTGATGTGTCTGGACGCTTCCCGTGGTCTCAGAACAATTCACCATCCTCA
TGGCGGCTACCCTGCCAGGCTGCACGGTCATCTCAGCTCCGACGCTTTCC
TGGTCAACAACGATCTCAGGGTCAAGCTGTCTGACTTCTGCACAACCAAG
ACAAGGTCATCTATCAAGAAGAAAGGTCGGCGCGGCCGCAGGAGCACTGT
TGCCTACCTGGCACCAGAGCATCTGCAGAAGATCCATGAAGCTCCTGATT
ATTCCTCTGAAGTATACAGGTATGTCATCATGGAATATACTTGTACAAAC
AATAAGCAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000402 | genome | Sc0000402:176534..179457 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97434_cuf2 |
| Biotype | protein_coding |
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