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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97390_cuf0 >transcript:BL97390_cuf0-protein ID=transcript:BL97390_cuf0-protein|Name=transcript:BL97390_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=154bp
MSLRLTLRLAIYIVPSGSSCIFAPAAGWTEETCKVSTMVFRTLLAVFATV
AAAQGQSCVFPFTYHGGTFNSCTSVDSDVAWCSTDAVYVGNYVDCDERYC
TFPFTYHGMTFTTCTMYDDDRPWCSISPQYGSDHVYCSDGAAVLSVDAEV
DKPG Run BLAST on NCBI mRNA from alignment at Sc0000073:1073197..1075077+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97390_cuf0 ID=transcript:BL97390_cuf0|Name=transcript:BL97390_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1881bp|location=Sequence derived from alignment at Sc0000073:1073197..1075077+ (Branchiostoma lanceolatum)
TCAAATGTTCCTTGATTAAGTTGTCTGAACAAAACTTTGAAATAAATGAA
GTAGGGTATGAAAGTACAATTGCTTTTCAGCTTTTCTCGGACTCCAGGAT
TTTGATGCCTAAAACCTTGCCTCCCCGTTGGTTTGCTCTGTTGGTCTTGC
ATTTTTTTTAGAATAAAATGAAGAGATCCAACGAATTGTATTGGTGTCGT
CTAATGCTTCGATTCATCAATCGATCCATGTAATATCCCGTGCGTCAGAA
ATGGGGTCATGTCCTTGAGGCTGACCTTACGATTAGCTATATATATTGTG
CCCAGCGGTTCGAGCTGCATCTTCGCTCCTGCGGCTGGCTGGACGGAAGA
GACCTGCAAAGTTAGCACCATGGTGTTCCGGACACTTCTCGCCGTGTTTG
CCACTGTGGCAGCGGCTCAAGGTGTGTGACATTGGTGGATTCTGTGGTAC
CACGTTACTTATTTCGCTTGTCGTCTGACTAGTACAGCAGGCAGCTTAGG
TCAAGGGTGTCCTATGGGAAAAAATGCTGGTTGGGACTAGGAAACGTGGG
TGTTGAATCCCACAACAAGACATGAAAGGTTTCCATCTTTTCTAAGAACT
GACTCTTATATATCTTTGTGAAATGTTTTCATTAACTGAATGTTTGCTGT
TGACTGCCGTGTTTCGTCCCATATCTGATTTGCATTTTTCAACTTTGTGA
AGAGATAGATATATAGCTGCCACGACAATCCCTTAATATCTAATTTATCT
TTGTTTTGTTGTCTCCGGGGTAGCAAAAGCGCAAGGGACGCGATGGTGGG
TTAAATTGAACAATGAAAAATATGCTTAGCAATGTAATCGTAAGCCACCA
CGAAAGTCGTGTCTTGACGTAAGTCACATCTTGAAATGTACATGGATGTT
CATGGCCTGAAGTTGACCCCCAGCTTCTATAATTTTTTTTCATATTTGGG
GGAGTACAAATGATTCCCTCGCCTGCTCTCAGTGTAAGACTCTTCCTACA
GATTTGAGACGCGCTAGTGCAGTGTACAGTGTCCGACGTATGGGCAACTT
CTTACCTTAGCATATCTGAGTCACAAGCTCCCGTCTCAAACGGCCCTGAG
CCGTAAACACGAGACATCACAAACATTTAGAGGAGTCTTAAATGGAGATT
CATGCGATTGATACCTACACTCCTCAGGGCAAAGTTGCGTCTTCCCGTTC
ACCTATCATGGCGGCACCTTTAACAGCTGCACCTCTGTTGACTCGGATGT
TGCGTGGTGCTCAACAGACGCCGTGTACGTCGGAAACTACGTCGACTGCG
ACGAACGTGAGTATCAATGGCTGTTAAAATCAGGGAGACTTAAGAAAAAT
TTCAAGCTATTTTGACTTTGTCTTACATCCTTAGCAGAAGAGGAATTTTC
AGACGGTCTTTGTCGAGGTACAGTTTTCTGTCAAGAATGCATATGCATCA
ACTTCAGTCTTTACCTTACCCCATCAAAAACACCCGGTTAAAGAATTTTC
ATTGCTGCAGAAAATACACTGTAAGGCAGTGAAAAATGTTCCATCAACCT
CACCAGCACGTATGTACACGTATGTTAAGTTTACACGTTGTTTCGTCAGG
CTACTGTACGTTCCCGTTCACGTACCACGGGATGACGTTCACGACCTGCA
CCATGTATGACGACGACCGCCCCTGGTGTTCCATCTCACCGCAGTACGGG
TCAGACCACGTGTACTGCAGCGACGGCGCAGGTCAGTCTCGGTACTGCAT
ATTAGCGAAGTCTATAAAGTTCTAATTTTCTTGCAATAGTCACCTTATCT
GTTTACCGGAGTTGATTTATCATCTTTTGTTTGTTTGTTTCAGCCGTGCT
TAGCGTGGACGCAGAAGTTGACAAACCAGGT Coding sequence (CDS) from alignment at Sc0000073:1073197..1075077+ >transcript:BL97390_cuf0 ID=transcript:BL97390_cuf0|Name=transcript:BL97390_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1848bp|location=Sequence derived from alignment at Sc0000073:1073197..1075077+ (Branchiostoma lanceolatum)
ATGTCCTTGAGGCTGACCTTACGATTAGCTATATATATTGTGCCCAGCGG
TTCGAGCTGCATCTTCGCTCCTGCGGCTGGCTGGACGGAAGAGACCTGCA
AAGTTAGCACCATGGTGTTCCGGACACTTCTCGCCGTGTTTGCCACTGTG
GCAGCGGCTCAAGGGCAAAGTTGCGTCTTCCCGTTCACCTATCATGGCGG
CACCTTTAACAGCTGCACCTCTGTTGACTCGGATGTTGCGTGGTGCTCAA
CAGACGCCGTGTACGTCGGAAACTACGTCGACTGCGACGAACGCTACTGT
ACGTTCCCGTTCACGTACCACGGGATGACGTTCACGACCTGCACCATGTA
TGACGACGACCGCCCCTGGTGTTCCATCTCACCGCAGTACGGGTCAGACC
ACGTGTACTGCAGCGACGGCGCAGCCGTGCTTAGCGTGGACGCAGAAGTT
GACAAACCAGGTATGTCCTTGAGGCTGACCTTACGATTAGCTATATATAT
TGTGCCCAGCGGTTCGAGCTGCATCTTCGCTCCTGCGGCTGGCTGGACGG
AAGAGACCTGCAAAGTTAGCACCATGGTGTTCCGGACACTTCTCGCCGTG
TTTGCCACTGTGGCAGCGGCTCAAGGGCAAAGTTGCGTCTTCCCGTTCAC
CTATCATGGCGGCACCTTTAACAGCTGCACCTCTGTTGACTCGGATGTTG
CGTGGTGCTCAACAGACGCCGTGTACGTCGGAAACTACGTCGACTGCGAC
GAACGCTACTGTACGTTCCCGTTCACGTACCACGGGATGACGTTCACGAC
CTGCACCATGTATGACGACGACCGCCCCTGGTGTTCCATCTCACCGCAGT
ACGGGTCAGACCACGTGTACTGCAGCGACGGCGCAGCCGTGCTTAGCGTG
GACGCAGAAGTTGACAAACCAGGTATGTCCTTGAGGCTGACCTTACGATT
AGCTATATATATTGTGCCCAGCGGTTCGAGCTGCATCTTCGCTCCTGCGG
CTGGCTGGACGGAAGAGACCTGCAAAGTTAGCACCATGGTGTTCCGGACA
CTTCTCGCCGTGTTTGCCACTGTGGCAGCGGCTCAAGGGCAAAGTTGCGT
CTTCCCGTTCACCTATCATGGCGGCACCTTTAACAGCTGCACCTCTGTTG
ACTCGGATGTTGCGTGGTGCTCAACAGACGCCGTGTACGTCGGAAACTAC
GTCGACTGCGACGAACGCTACTGTACGTTCCCGTTCACGTACCACGGGAT
GACGTTCACGACCTGCACCATGTATGACGACGACCGCCCCTGGTGTTCCA
TCTCACCGCAGTACGGGTCAGACCACGTGTACTGCAGCGACGGCGCAGCC
GTGCTTAGCGTGGACGCAGAAGTTGACAAACCAGGTATGTCCTTGAGGCT
GACCTTACGATTAGCTATATATATTGTGCCCAGCGGTTCGAGCTGCATCT
TCGCTCCTGCGGCTGGCTGGACGGAAGAGACCTGCAAAGTTAGCACCATG
GTGTTCCGGACACTTCTCGCCGTGTTTGCCACTGTGGCAGCGGCTCAAGG
GCAAAGTTGCGTCTTCCCGTTCACCTATCATGGCGGCACCTTTAACAGCT
GCACCTCTGTTGACTCGGATGTTGCGTGGTGCTCAACAGACGCCGTGTAC
GTCGGAAACTACGTCGACTGCGACGAACGCTACTGTACGTTCCCGTTCAC
GTACCACGGGATGACGTTCACGACCTGCACCATGTATGACGACGACCGCC
CCTGGTGTTCCATCTCACCGCAGTACGGGTCAGACCACGTGTACTGCAGC
GACGGCGCAGCCGTGCTTAGCGTGGACGCAGAAGTTGACAAACCAGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000073 | genome | Sc0000073:1073197..1075077 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97390_cuf0 |
| Biotype | protein_coding |
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