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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97315_cuf1 >transcript:BL97315_cuf1-protein ID=transcript:BL97315_cuf1-protein|Name=transcript:BL97315_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=172bp
MHGTCADGVGQFTCDCEAGWSGVTCNADFDECESSPCAHGTCTDLFNGYT
CQCDPGWDGTDCKIDVDECASNPCQHGTCQDLVNGYSCSCEPGWTNDTCH
QDINECESNPCQHGTCVDRVNGFTCECDWGWTDPTCNKDIDECEFDPCTN
GNCTNYNGSYSCVCDEGWTNNR Run BLAST on NCBI mRNA from alignment at Sc0000129:747057..748784+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97315_cuf1 ID=transcript:BL97315_cuf1|Name=transcript:BL97315_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1728bp|location=Sequence derived from alignment at Sc0000129:747057..748784+ (Branchiostoma lanceolatum)
GGTAACGTTACTTGAATGAAAGCCTTTCGATAGCCTTTGTTGTACATTCA
TGCCCTATCGGGCTAAGTACAGGCATACAAATACAAAAGTCGTATAATAA
AGTACATATAATGACAGGGCTTTTGATAATAATCTAAAACATGGGTTCTA
AAACTACTGTTTGATACATAGGTTTGGCTTCTTCTTGTCTCCTTGTGGTG
TAAAGAAATTAGGTTGAGTTGTTTTGTTGATGTGATCCACAGATATTGAC
GAGTGCACGTCCAGTCCGTGTATGCACGGCACCTGTGCTGACGGGGTGGG
ACAGTTCACCTGTGACTGTGAAGCGGGGTGGTCTGGAGTCACGTGTAACG
CAGGTAGGGACGCTCTCTTATGTAAGATCAACGTTTTCGATACGATTGTA
TTTCGAGATACTATACGCACGCGATATGTTCTAACTTTTGATTATAGTTG
GACGGTAAAGAGGGCCTCGTCTAGTCGCAGATTTGATTTAAATGACAAAT
TATTGATAGTTTTGGAAATAATAGCCTTTTTCCTTTCATCAAGGGTTTGT
ATTTTCAACGATTATATATATCCATTTACAGACATTCATTTTTGATCTTG
ACAGACTTTGATGAATGTGAATCCAGCCCTTGTGCTCACGGCACATGTAC
CGATCTATTCAACGGCTACACCTGTCAGTGCGATCCAGGATGGGATGGAA
CTGACTGCAAGATAGGTACATGTACATCAGATTTCTTCATTTACTGTCAA
ATTGTTCGGCCAAACGTTATTCAACTAGCCCTCTATATTTTGACGTGGGC
GATTTTATAGTGTTAGATTCCTGTTTTTTAGACATATGTGTGGCATCAGG
TTAACGTTAGTTGCCTATTTCTTGACGAGCGCAAACTCTGTGAATGATTT
CATCACGTTGGTGAATGATTGAATAGCCATGTTTTTTTATTCACAATTAT
TTGCATGAGCCAACGTTTCGATGACCGCCTGTCATCTTCTGCTAACTACT
TTATTCAACAATCCCTGTCCCACTATGTTTAACAGATGTCGACGAGTGTG
CCTCCAACCCCTGCCAACACGGCACCTGCCAGGACCTGGTGAACGGGTAC
AGCTGCAGCTGCGAGCCGGGATGGACCAATGACACCTGCCATCAAGGTAC
TGCAGATGCTGATCAAAAGTCGCAAATAGTGTATGATATTGTCAAGCAAC
ACCTAGTAATATGACAATACGAGCATGATAAGATATTATCTTTTGCACAC
TCAGATATCAATGAATGTGAATCCAACCCCTGCCAGCATGGAACGTGCGT
TGATAGAGTAAACGGCTTCACCTGCGAGTGTGACTGGGGATGGACCGACC
CTACCTGCAATAAAGGTACGTTAGAAACCTTACAGACTCCCAGCTAGTAA
TTATCCATCGTCAAATACAATGTCCTATACTATGCTATACTACTAAGTTC
CTGTGTATAACCTTGAGTAAAAAAAAGAAGATGTTTGCATCTTGCAAGTG
AACAGAAACTTTCGCGGATGAAACCATAAAGTACTTTGTAACCCGCTTGA
TTTGTTTTATATAATTATCATACAGTGCGATATAAATCCTTTAAAGCTTT
CTTTAACATCTTTAATTTTGCACAGATATTGACGAGTGTGAGTTCGACCC
ATGTACAAACGGCAACTGTACTAACTATAACGGAAGCTACTCCTGTGTCT
GCGACGAGGGATGGACCAACAATCGGAC Coding sequence (CDS) from alignment at Sc0000129:747057..748784+ >transcript:BL97315_cuf1 ID=transcript:BL97315_cuf1|Name=transcript:BL97315_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2580bp|location=Sequence derived from alignment at Sc0000129:747057..748784+ (Branchiostoma lanceolatum)
ATGCACGGCACCTGTGCTGACGGGGTGGGACAGTTCACCTGTGACTGTGA
AGCGGGGTGGTCTGGAGTCACGTGTAACGCAGACTTTGATGAATGTGAAT
CCAGCCCTTGTGCTCACGGCACATGTACCGATCTATTCAACGGCTACACC
TGTCAGTGCGATCCAGGATGGGATGGAACTGACTGCAAGATAGATGTCGA
CGAGTGTGCCTCCAACCCCTGCCAACACGGCACCTGCCAGGACCTGGTGA
ACGGGTACAGCTGCAGCTGCGAGCCGGGATGGACCAATGACACCTGCCAT
CAAGATATCAATGAATGTGAATCCAACCCCTGCCAGCATGGAACGTGCGT
TGATAGAGTAAACGGCTTCACCTGCGAGTGTGACTGGGGATGGACCGACC
CTACCTGCAATAAAGATATTGACGAGTGTGAGTTCGACCCATGTACAAAC
GGCAACTGTACTAACTATAACGGAAGCTACTCCTGTGTCTGCGACGAGGG
ATGGACCAACAATCGGATGCACGGCACCTGTGCTGACGGGGTGGGACAGT
TCACCTGTGACTGTGAAGCGGGGTGGTCTGGAGTCACGTGTAACGCAGAC
TTTGATGAATGTGAATCCAGCCCTTGTGCTCACGGCACATGTACCGATCT
ATTCAACGGCTACACCTGTCAGTGCGATCCAGGATGGGATGGAACTGACT
GCAAGATAGATGTCGACGAGTGTGCCTCCAACCCCTGCCAACACGGCACC
TGCCAGGACCTGGTGAACGGGTACAGCTGCAGCTGCGAGCCGGGATGGAC
CAATGACACCTGCCATCAAGATATCAATGAATGTGAATCCAACCCCTGCC
AGCATGGAACGTGCGTTGATAGAGTAAACGGCTTCACCTGCGAGTGTGAC
TGGGGATGGACCGACCCTACCTGCAATAAAGATATTGACGAGTGTGAGTT
CGACCCATGTACAAACGGCAACTGTACTAACTATAACGGAAGCTACTCCT
GTGTCTGCGACGAGGGATGGACCAACAATCGGATGCACGGCACCTGTGCT
GACGGGGTGGGACAGTTCACCTGTGACTGTGAAGCGGGGTGGTCTGGAGT
CACGTGTAACGCAGACTTTGATGAATGTGAATCCAGCCCTTGTGCTCACG
GCACATGTACCGATCTATTCAACGGCTACACCTGTCAGTGCGATCCAGGA
TGGGATGGAACTGACTGCAAGATAGATGTCGACGAGTGTGCCTCCAACCC
CTGCCAACACGGCACCTGCCAGGACCTGGTGAACGGGTACAGCTGCAGCT
GCGAGCCGGGATGGACCAATGACACCTGCCATCAAGATATCAATGAATGT
GAATCCAACCCCTGCCAGCATGGAACGTGCGTTGATAGAGTAAACGGCTT
CACCTGCGAGTGTGACTGGGGATGGACCGACCCTACCTGCAATAAAGATA
TTGACGAGTGTGAGTTCGACCCATGTACAAACGGCAACTGTACTAACTAT
AACGGAAGCTACTCCTGTGTCTGCGACGAGGGATGGACCAACAATCGGAT
GCACGGCACCTGTGCTGACGGGGTGGGACAGTTCACCTGTGACTGTGAAG
CGGGGTGGTCTGGAGTCACGTGTAACGCAGACTTTGATGAATGTGAATCC
AGCCCTTGTGCTCACGGCACATGTACCGATCTATTCAACGGCTACACCTG
TCAGTGCGATCCAGGATGGGATGGAACTGACTGCAAGATAGATGTCGACG
AGTGTGCCTCCAACCCCTGCCAACACGGCACCTGCCAGGACCTGGTGAAC
GGGTACAGCTGCAGCTGCGAGCCGGGATGGACCAATGACACCTGCCATCA
AGATATCAATGAATGTGAATCCAACCCCTGCCAGCATGGAACGTGCGTTG
ATAGAGTAAACGGCTTCACCTGCGAGTGTGACTGGGGATGGACCGACCCT
ACCTGCAATAAAGATATTGACGAGTGTGAGTTCGACCCATGTACAAACGG
CAACTGTACTAACTATAACGGAAGCTACTCCTGTGTCTGCGACGAGGGAT
GGACCAACAATCGGATGCACGGCACCTGTGCTGACGGGGTGGGACAGTTC
ACCTGTGACTGTGAAGCGGGGTGGTCTGGAGTCACGTGTAACGCAGACTT
TGATGAATGTGAATCCAGCCCTTGTGCTCACGGCACATGTACCGATCTAT
TCAACGGCTACACCTGTCAGTGCGATCCAGGATGGGATGGAACTGACTGC
AAGATAGATGTCGACGAGTGTGCCTCCAACCCCTGCCAACACGGCACCTG
CCAGGACCTGGTGAACGGGTACAGCTGCAGCTGCGAGCCGGGATGGACCA
ATGACACCTGCCATCAAGATATCAATGAATGTGAATCCAACCCCTGCCAG
CATGGAACGTGCGTTGATAGAGTAAACGGCTTCACCTGCGAGTGTGACTG
GGGATGGACCGACCCTACCTGCAATAAAGATATTGACGAGTGTGAGTTCG
ACCCATGTACAAACGGCAACTGTACTAACTATAACGGAAGCTACTCCTGT
GTCTGCGACGAGGGATGGACCAACAATCGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000129 | genome | Sc0000129:747057..748784 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97315_cuf1 |
| Biotype | protein_coding |
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