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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97032_cuf8 >transcript:BL97032_cuf8-protein ID=transcript:BL97032_cuf8-protein|Name=transcript:BL97032_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=261bp
NEVPSDPDQPREYGGFLVTAKVFRIVVTSTYEDKKPTQLTTIEFHGTTES
IPKGVDLPKTVKALTGKIDLPTLEHVDETVSEGTWIPGSPSEPVEDDGVT
YVAFTFDTDTTVEQVRITDDSVKSFTIQMSPTGEPGTWIDVKSFDDVEPQ
DFGGFVVTSSFVRIAVTQTYEGKKTTLVKTEFHGAPGGLPKTPDFEEIKP
ESASPLQGPAPASPVGPEGPEEEGPEEAPGPEGQEGAAGPEGPEDGEGPG
GAPGPEGPEGA Run BLAST on NCBI mRNA from alignment at Sc0000077:927188..929415- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97032_cuf8 ID=transcript:BL97032_cuf8|Name=transcript:BL97032_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=2228bp|location=Sequence derived from alignment at Sc0000077:927188..929415- (Branchiostoma lanceolatum)
GAACGAGGTACCCAGTGATCCAGACCAGCCGAGGGAGTACGGTGGATTTC
TCGTAACTGCTAAAGTGTTCCGTATCGTCGTGACGTCGACATATGAGGAC
AAGAAGCCTACTCAGCTGACGACGATTGAATTCCACGGAACAACAGGTAA
TAGTCGACAACCATGCATAAAAATTAGTAAAGAAAAAAAAAGGAAAACAT
ACGTCACATGTGGTCGATGACCGTCGATATTTCTTTTTTTTCTTACAAGC
GAGTTGGTACATATGATTATGTTAAAGAATCAAATATTAGATAATTCAAT
TGCCTTTTTTCCATATAAGTTTGATGAAGCCAGTGTTACTTTTTGTTTGC
TTACTTCAGAGAGTATCCCGAAGGGAGTGGACCTGCCGAAAACCGTAAAG
GCGCTAACTGGCAAGATAGACCTGCCCACGCTCGAACACGTGGATGAGAC
AGGTAAAGATCTCATGACGAAGCTTTTTCTCCACTCATATCATATTGGCA
TTGCTTTTAATGATATCACTTGATCTTTATTCTATCACTACCTAAAAGCA
CCGTATGCTCAGTTATCCTCCGACATGATTTGTTTTCCTGCTTTAGGCCA
CAGCAAGTAAATTTTATGGATGACATCCTCCGCAGACTCCAAAATTAATG
AGATAGGGCGAAAAAAAAACAAGGCGGGTAAAAAAAAACAAGATTCCTAT
ATTTTCAAATTTTGAGATCATGAATCTTGTTAAACAAGACTTGCGGCAAC
AAAATATGATATCACAACCAACAGGTCTTTTGTTCCTGTATTCAACCCAT
GACGTTTCATATATAATATAAGACCACCTTGATTCAACAGTAAACATGTC
GTACCATCATGGGCATTCATATGTAATGGAACACCTGGGCAGCAACTATA
TTCAACTGGGTATTCATATGGAACACTGTGTCAACACATGCCATCAAATG
CAAGCAATTGAGTCTCAACGTTGCTGGATCATATCACCTGATCATATCAA
GCAATTGCACAACACAGAGCCTTTGTCGGACATATCATTGGAGGGCAATG
AAATTTCGATTTTGTTAGTAGTTCACTTCATTCAAGAACAGCACATCGGA
TTACACGTTGTTGATAATAATGGCACAGAAATTACACACTATATTATACA
AGTTTGGCATGAGGGCTGCACAGTGTCTTCCTGTAAGTTGGTGACGACGA
GCAATCTTGTTACAGCTTGCATGCACAATAATTGTAAAATGCACTTGTAC
AGAGTTTTCACAATTCTTACATTTTCAAATGCCTTTTTATGGCATCTAGA
ACGTTTTTGCGATAGAACTGACTGTAGTTTGCGACCTATTGTATTATTTT
CGGTATGTTGACCATTGCCGAAGGGTAAAAAAATCTTGTTTTTTTTTTCA
AAATCAGGCGAAAATTAATGAGCGCGCTGATGTCATCCATAAAATTTACT
TGCTGTGGCCTTAGTACTAAAGGTAATAACCAGCTACATGCCCTATCGAT
TCTTAGTGTCTGAAGGAACGTGGATCCCTGGAAGCCCAAGTGAGCCTGTT
GAAGATGACGGCGTCACCTATGTTGCATTCACCTTCGACACGGATACAAC
CGTAGAGCAAGTCCGCATTACTGACGATTCCGTTAAGTCTTTTACAATAC
AAATGTCCCCCACGGGAGAACCAGGGACATGGATTGATGTAAAATCGTTC
GACGACGTTGAACCCCAAGACTTTGGTGGTTTTGTGGTCACAAGCAGCTT
CGTTAGGATTGCAGTTACGCAAACCTATGAGGGGAAAAAGACAACTCTGG
TGAAAACAGAATTCCACGGAGCACCAGGTAAATAGCAAAACTTACAAGAT
AATGTTTGCATGTCAAATTGAATCTGGTTGTATCTGGACAAGAAAAGTCA
CGTACTGAAATAACATACAATATGCCATGAATGTGCTGCAGTCCTTTTGA
ATTATATGTTGAATTATGTTTTAATAGTAAGAGGGATGATTTCTCCTCAT
ACAGGTGGCCTACCAAAAACGCCTGACTTCGAAGAAATAAAACCTGAGTC
GGCATCACCACTCCAGGGCCCCGCCCCAGCAAGCCCAGTGGGTCCTGAAG
GTCCAGAAGAAGAAGGCCCAGAAGAAGCACCCGGGCCTGAGGGTCAAGAA
GGAGCAGCCGGCCCTGAGGGTCCAGAAGATGGAGAAGGCCCAGGAGGAGC
ACCCGGCCCTGAGGGTCCAGAAGGAGCA Coding sequence (CDS) from alignment at Sc0000077:927188..929415- >transcript:BL97032_cuf8 ID=transcript:BL97032_cuf8|Name=transcript:BL97032_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=3132bp|location=Sequence derived from alignment at Sc0000077:927188..929415- (Branchiostoma lanceolatum)
AACGAGGTACCCAGTGATCCAGACCAGCCGAGGGAGTACGGTGGATTTCT
CGTAACTGCTAAAGTGTTCCGTATCGTCGTGACGTCGACATATGAGGACA
AGAAGCCTACTCAGCTGACGACGATTGAATTCCACGGAACAACAGAGAGT
ATCCCGAAGGGAGTGGACCTGCCGAAAACCGTAAAGGCGCTAACTGGCAA
GATAGACCTGCCCACGCTCGAACACGTGGATGAGACAGTGTCTGAAGGAA
CGTGGATCCCTGGAAGCCCAAGTGAGCCTGTTGAAGATGACGGCGTCACC
TATGTTGCATTCACCTTCGACACGGATACAACCGTAGAGCAAGTCCGCAT
TACTGACGATTCCGTTAAGTCTTTTACAATACAAATGTCCCCCACGGGAG
AACCAGGGACATGGATTGATGTAAAATCGTTCGACGACGTTGAACCCCAA
GACTTTGGTGGTTTTGTGGTCACAAGCAGCTTCGTTAGGATTGCAGTTAC
GCAAACCTATGAGGGGAAAAAGACAACTCTGGTGAAAACAGAATTCCACG
GAGCACCAGGTGGCCTACCAAAAACGCCTGACTTCGAAGAAATAAAACCT
GAGTCGGCATCACCACTCCAGGGCCCCGCCCCAGCAAGCCCAGTGGGTCC
TGAAGGTCCAGAAGAAGAAGGCCCAGAAGAAGCACCCGGGCCTGAGGGTC
AAGAAGGAGCAGCCGGCCCTGAGGGTCCAGAAGATGGAGAAGGCCCAGGA
GGAGCACCCGGCCCTGAGGGTCCAGAAGGAGCAAACGAGGTACCCAGTGA
TCCAGACCAGCCGAGGGAGTACGGTGGATTTCTCGTAACTGCTAAAGTGT
TCCGTATCGTCGTGACGTCGACATATGAGGACAAGAAGCCTACTCAGCTG
ACGACGATTGAATTCCACGGAACAACAGAGAGTATCCCGAAGGGAGTGGA
CCTGCCGAAAACCGTAAAGGCGCTAACTGGCAAGATAGACCTGCCCACGC
TCGAACACGTGGATGAGACAGTGTCTGAAGGAACGTGGATCCCTGGAAGC
CCAAGTGAGCCTGTTGAAGATGACGGCGTCACCTATGTTGCATTCACCTT
CGACACGGATACAACCGTAGAGCAAGTCCGCATTACTGACGATTCCGTTA
AGTCTTTTACAATACAAATGTCCCCCACGGGAGAACCAGGGACATGGATT
GATGTAAAATCGTTCGACGACGTTGAACCCCAAGACTTTGGTGGTTTTGT
GGTCACAAGCAGCTTCGTTAGGATTGCAGTTACGCAAACCTATGAGGGGA
AAAAGACAACTCTGGTGAAAACAGAATTCCACGGAGCACCAGGTGGCCTA
CCAAAAACGCCTGACTTCGAAGAAATAAAACCTGAGTCGGCATCACCACT
CCAGGGCCCCGCCCCAGCAAGCCCAGTGGGTCCTGAAGGTCCAGAAGAAG
AAGGCCCAGAAGAAGCACCCGGGCCTGAGGGTCAAGAAGGAGCAGCCGGC
CCTGAGGGTCCAGAAGATGGAGAAGGCCCAGGAGGAGCACCCGGCCCTGA
GGGTCCAGAAGGAGCAAACGAGGTACCCAGTGATCCAGACCAGCCGAGGG
AGTACGGTGGATTTCTCGTAACTGCTAAAGTGTTCCGTATCGTCGTGACG
TCGACATATGAGGACAAGAAGCCTACTCAGCTGACGACGATTGAATTCCA
CGGAACAACAGAGAGTATCCCGAAGGGAGTGGACCTGCCGAAAACCGTAA
AGGCGCTAACTGGCAAGATAGACCTGCCCACGCTCGAACACGTGGATGAG
ACAGTGTCTGAAGGAACGTGGATCCCTGGAAGCCCAAGTGAGCCTGTTGA
AGATGACGGCGTCACCTATGTTGCATTCACCTTCGACACGGATACAACCG
TAGAGCAAGTCCGCATTACTGACGATTCCGTTAAGTCTTTTACAATACAA
ATGTCCCCCACGGGAGAACCAGGGACATGGATTGATGTAAAATCGTTCGA
CGACGTTGAACCCCAAGACTTTGGTGGTTTTGTGGTCACAAGCAGCTTCG
TTAGGATTGCAGTTACGCAAACCTATGAGGGGAAAAAGACAACTCTGGTG
AAAACAGAATTCCACGGAGCACCAGGTGGCCTACCAAAAACGCCTGACTT
CGAAGAAATAAAACCTGAGTCGGCATCACCACTCCAGGGCCCCGCCCCAG
CAAGCCCAGTGGGTCCTGAAGGTCCAGAAGAAGAAGGCCCAGAAGAAGCA
CCCGGGCCTGAGGGTCAAGAAGGAGCAGCCGGCCCTGAGGGTCCAGAAGA
TGGAGAAGGCCCAGGAGGAGCACCCGGCCCTGAGGGTCCAGAAGGAGCAA
ACGAGGTACCCAGTGATCCAGACCAGCCGAGGGAGTACGGTGGATTTCTC
GTAACTGCTAAAGTGTTCCGTATCGTCGTGACGTCGACATATGAGGACAA
GAAGCCTACTCAGCTGACGACGATTGAATTCCACGGAACAACAGAGAGTA
TCCCGAAGGGAGTGGACCTGCCGAAAACCGTAAAGGCGCTAACTGGCAAG
ATAGACCTGCCCACGCTCGAACACGTGGATGAGACAGTGTCTGAAGGAAC
GTGGATCCCTGGAAGCCCAAGTGAGCCTGTTGAAGATGACGGCGTCACCT
ATGTTGCATTCACCTTCGACACGGATACAACCGTAGAGCAAGTCCGCATT
ACTGACGATTCCGTTAAGTCTTTTACAATACAAATGTCCCCCACGGGAGA
ACCAGGGACATGGATTGATGTAAAATCGTTCGACGACGTTGAACCCCAAG
ACTTTGGTGGTTTTGTGGTCACAAGCAGCTTCGTTAGGATTGCAGTTACG
CAAACCTATGAGGGGAAAAAGACAACTCTGGTGAAAACAGAATTCCACGG
AGCACCAGGTGGCCTACCAAAAACGCCTGACTTCGAAGAAATAAAACCTG
AGTCGGCATCACCACTCCAGGGCCCCGCCCCAGCAAGCCCAGTGGGTCCT
GAAGGTCCAGAAGAAGAAGGCCCAGAAGAAGCACCCGGGCCTGAGGGTCA
AGAAGGAGCAGCCGGCCCTGAGGGTCCAGAAGATGGAGAAGGCCCAGGAG
GAGCACCCGGCCCTGAGGGTCCAGAAGGAGCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000077 | genome | Sc0000077:927188..929415 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97032_cuf8 |
| Biotype | protein_coding |
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