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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96954_cuf3 >transcript:BL96954_cuf3-protein ID=transcript:BL96954_cuf3-protein|Name=transcript:BL96954_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=273bp
ATCSSVGGVHIESFDGRRFDFHGRCQYVFAKDKGWDLFTVLVENKECQTE
GDTCIESATLIIGNVRDGNVIRFSQGNRISMGQERMSIELPYFGELFNIR
KASGEYVQLNSVIGVKILWSGSTLMVTVDPGYVGNTHGLCGVYNGNLGDD
FRTQQGIIVDNVGEFGNSWKVGGSMCPDVGTGPDIIRPCDLVTPRTNQAT
ELCSIIKGAVFANCHAEEDPDHYFGTCRDDTCRCEDPGLSCFCDAVAFYS
YLCMQKGIIIPWRDSQELGGICS Run BLAST on NCBI mRNA from alignment at Sc0000044:2033507..2036891- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96954_cuf3 ID=transcript:BL96954_cuf3|Name=transcript:BL96954_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=3385bp|location=Sequence derived from alignment at Sc0000044:2033507..2036891- (Branchiostoma lanceolatum)
GCTACATGCAGTTCGGTTGGTGGCGTACATATAGAAAGCTTTGACGGCAG
GCGATTTGATTTCCACGGCCGATGTCAGTATGTGTTCGCCAAGGACAAAG
GATGGGACCTTTTCACTGTACTTGTAGAAAATAAGGAATGCCAAACGGAG
GGCGACACATGCATTGAGTAAGTGCTGCAAAGTAGATACTTTACCCATGA
CATATAATAGTTGCTTATTTGTTGTCCAATTCATACCGAAGCGGATATAT
CAAATGTTTAAGTTGTAAATAAACAGTTGATATCAAACGAGCTTTCCCCT
ACTTTCAACGTTAAGACCAATTAAGATTTGCGCGTGTCTTTATTCCATAT
TTGATATTTTCACAAATTGTATGCCATTAATTTATATATAATTTCACTTT
TCTTCACCCCTAGAAGCTAAGGTTATATATTTTAATTTTTTGGTCGTTGG
TAGCTTTAATATGTCTTATAGTATTTTTTTTTGGGGGGGGGGTTGTTTTT
TTTTCTCCACTTTATTCACCTCTACCAATTTTTACAACCAAGAACAAAAT
CATAACATCATACTGAAGTTGGAACAATACGTAAAAGTAGCATTACAGAA
GTTTTACAATATTGTATACAAAAACTAACTATCTGTGACAAAAAGGTGCA
TAAATACGAAACAAGGCATCTTTAAATACAAAACAGAACTTAAAATAGTA
AGGAAAAATTACATACAATACAAAGCTTAAACTTGTCTAATAGTATTATT
GAAATGTCTTTTTGAAGGTCAGCAACACTGATCATTGGCAACGTCAGAGA
TGGAAATGTGATCAGGTTCAGCCAAGGCAACAGAATCAGTATGGGTCAAG
AGCGCATGTCTATCGAACTGCCCTATTTTGGTGGTATGTACATGTTTGTT
TGTTGATTTGTTTTATTAAGATCTCCATTAGTGCGCAATCTATACACTAA
TATTCCTGGATACCGCCTACATTAAATGCAATTTTATCAATACAGGAACA
ATACAATCAAATCAAATACAGGAAGAACGAAAACAATTGTACTGTGTCTT
TACATAATACATGTACAAAATCTATTAGACAACTGGATATATTCTCTAAA
AGAGTCAGACATTTAGCAAATACCGACCCTACTTTTTTTGCAGGGGCGTA
ACAAGAAACACACCATTTTTCTCCTTAGGCATCACTAACCAACTATGGAA
CACGTTTGATTTCAGAGTTGTTCAACATTCGCAAGGCCTCTGGTGAATAC
GTCCAGTTGAATTCAGTTATAGGTGTGAAGATATTGTGGAGCGGATCTAC
CTTGATGGTGACGGTAAGCTGACCTGTCTTGTTATTATGAAATACATTTT
ATTTGCCATTGTCCATTTACAGAACCGAAAGAGACAAACTATTTAACCTA
GTAAGCAAAATTGTTCCCTGATTTGAATGTCGCACAGACCTACAAAAACT
GTATTTCTCTTAACACCGGTCAATGCATATATCTCCCCAAACGTTGGGAA
TGTCATATTCCATTGCACACAAAAAAGAAATCAAACCCTATAGCAACTGT
TAAGATTAGAAGTAGCTCTAGTTGACGACTTTGCTTTGTGTTTATTTCAT
TACTGTGTGCTTATTATTATCATTATCTCATTTCAATGGATTCATGCAAT
TAGCCCCTGGGCCTGAATTTGCAATAAAGTTATTATCATTTTTACGAGGC
ATTTTTTGACAGTACATTGTTGATTCACGGTCACTATTTATCTGTTAATT
TTACAATTATGACAGTCCTGCCTATCTTTATGCGTGCTGAAGGAAAAGAA
TTGGCATCTTTCTATTGTTGTTACATTTTGTCAGACAACATGGTCCTTTC
ACACCACAAGTCTAATGTCCTCTTTTGATTTGATTTCCACCGTCTTCACG
GTCGTCCTCGTGATCACGTATTTGTGGGGGGACAGGTGAAAATTTCAAAC
TCAACCTTATTTCCTTCAAATTTTATAGGTGGGTAGAGAATGTTATAAGG
ATCATAAAACATCTTAAGTGTTTGATCCAGCATCTTTCCTTCCAGAATTA
TGAATTTTTGAGAGATTATTTTTTCACTATTTTTGTAGAGAAAAAAAACA
TGTAACAAAATGTCACATACTTGTAGCAATTAAGTAGCTCATGGTTCGCT
TAAAACTTTTTCTTTGGTTCATTTTATATACAACATCCCATTTACCACCC
GAACTTTCCAGTAATGTGAACATATGGGTCCCCACCAGCCATGGAAGTTT
CATATTGATTGTGTCTGTAATATGTCATATGTACTATTTGAGAAATTCAT
TTACTGCAATACTGCAGGGCTGCTTCCTTGTTGTTGTTGCCTACTGAAGT
GTTCCATTTCGCCTAGGTGGACCCAGGATACGTGGGCAACACTCATGGAC
TTTGTGGGGTGTACAACGGCAACCTTGGGGATGACTTCCGTACTCAACAA
GGCATAATTGTTGACAACGTCGGCGAATTCGGCAACAGCTGGAAGGTGGG
CGGCTCCATGTGTCCAGATGTAGGTACAGGGCCGGACATCATCAGACCTT
GCGACCTCGTGACACCACGAAGTAAGACATGAATTGTTTCTAGCATATTT
TGTAACATTCGCAGTCAAGTGGTTAGTGACGTCATGACCCTGAGGTGCCT
CCGGATCTAGAGTTAAGAAGTTCTTGTCGCTCACACGGCATGGACGCTTC
TGGAAAATCTTAGTTTCTCAGTCCTTAGAACGGGACGTTGAGCCGTGGTC
CACTGTTCACTGTATTTGTTGAGCTAGGAGCAGGACAAAAATGTGAATTC
CAATCATGATGTACAAAATATTATTACTAATATCAAATATTTCCCTTATT
AGGTTATTTTCTATATTTTGTATTTCACGTTCAGGGTCTCCCTTAGAAAT
TGACACCTTTTAGGGGGCAATTCAAAAGTTCTGAAGATGAAGAGAATTAA
GTAGAACAAAATGCTTATTTCTCATGTTAGTGACCTTAATGTTTGCCCTT
TATATTTGTTCTGCAGCTGCTCAAGCAACCGAGCTGTGCATCATTAGCAA
TTAACACCTTTTAGGGGCAATCCAGAAGAGAATTAAGTAGAACAAAATGC
TTATTTCTCATGTTAGTGACCTCACTGCTTTTCCTATATATTTTTTCGGC
AGCTAATCAAGCAACAGAGCTGTGCAGCATCATCAAAGGCGCTGTCTTCG
CAAACTGCCACGCCGAAGAAGACCCTGACCACTATTTTGGCACATGCAGG
GATGACACCTGCAGATGCGAGGATCCGGGATTAAGTTGCTTCTGCGATGC
TGTTGCTTTCTACTCATATCTGTGTATGCAGAAAGGGATAATCATTCCTT
GGAGAGATAGCCAGGAGCTTGGGGGCATATGCAGT Coding sequence (CDS) from alignment at Sc0000044:2033507..2036891- >transcript:BL96954_cuf3 ID=transcript:BL96954_cuf3|Name=transcript:BL96954_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=4095bp|location=Sequence derived from alignment at Sc0000044:2033507..2036891- (Branchiostoma lanceolatum)
GCTACATGCAGTTCGGTTGGTGGCGTACATATAGAAAGCTTTGACGGCAG
GCGATTTGATTTCCACGGCCGATGTCAGTATGTGTTCGCCAAGGACAAAG
GATGGGACCTTTTCACTGTACTTGTAGAAAATAAGGAATGCCAAACGGAG
GGCGACACATGCATTGAGTCAGCAACACTGATCATTGGCAACGTCAGAGA
TGGAAATGTGATCAGGTTCAGCCAAGGCAACAGAATCAGTATGGGTCAAG
AGCGCATGTCTATCGAACTGCCCTATTTTGGTGAGTTGTTCAACATTCGC
AAGGCCTCTGGTGAATACGTCCAGTTGAATTCAGTTATAGGTGTGAAGAT
ATTGTGGAGCGGATCTACCTTGATGGTGACGGTGGACCCAGGATACGTGG
GCAACACTCATGGACTTTGTGGGGTGTACAACGGCAACCTTGGGGATGAC
TTCCGTACTCAACAAGGCATAATTGTTGACAACGTCGGCGAATTCGGCAA
CAGCTGGAAGGTGGGCGGCTCCATGTGTCCAGATGTAGGTACAGGGCCGG
ACATCATCAGACCTTGCGACCTCGTGACACCACGAACTAATCAAGCAACA
GAGCTGTGCAGCATCATCAAAGGCGCTGTCTTCGCAAACTGCCACGCCGA
AGAAGACCCTGACCACTATTTTGGCACATGCAGGGATGACACCTGCAGAT
GCGAGGATCCGGGATTAAGTTGCTTCTGCGATGCTGTTGCTTTCTACTCA
TATCTGTGTATGCAGAAAGGGATAATCATTCCTTGGAGAGATAGCCAGGA
GCTTGGGGGCATATGCAGTGCTACATGCAGTTCGGTTGGTGGCGTACATA
TAGAAAGCTTTGACGGCAGGCGATTTGATTTCCACGGCCGATGTCAGTAT
GTGTTCGCCAAGGACAAAGGATGGGACCTTTTCACTGTACTTGTAGAAAA
TAAGGAATGCCAAACGGAGGGCGACACATGCATTGAGTCAGCAACACTGA
TCATTGGCAACGTCAGAGATGGAAATGTGATCAGGTTCAGCCAAGGCAAC
AGAATCAGTATGGGTCAAGAGCGCATGTCTATCGAACTGCCCTATTTTGG
TGAGTTGTTCAACATTCGCAAGGCCTCTGGTGAATACGTCCAGTTGAATT
CAGTTATAGGTGTGAAGATATTGTGGAGCGGATCTACCTTGATGGTGACG
GTGGACCCAGGATACGTGGGCAACACTCATGGACTTTGTGGGGTGTACAA
CGGCAACCTTGGGGATGACTTCCGTACTCAACAAGGCATAATTGTTGACA
ACGTCGGCGAATTCGGCAACAGCTGGAAGGTGGGCGGCTCCATGTGTCCA
GATGTAGGTACAGGGCCGGACATCATCAGACCTTGCGACCTCGTGACACC
ACGAACTAATCAAGCAACAGAGCTGTGCAGCATCATCAAAGGCGCTGTCT
TCGCAAACTGCCACGCCGAAGAAGACCCTGACCACTATTTTGGCACATGC
AGGGATGACACCTGCAGATGCGAGGATCCGGGATTAAGTTGCTTCTGCGA
TGCTGTTGCTTTCTACTCATATCTGTGTATGCAGAAAGGGATAATCATTC
CTTGGAGAGATAGCCAGGAGCTTGGGGGCATATGCAGTGCTACATGCAGT
TCGGTTGGTGGCGTACATATAGAAAGCTTTGACGGCAGGCGATTTGATTT
CCACGGCCGATGTCAGTATGTGTTCGCCAAGGACAAAGGATGGGACCTTT
TCACTGTACTTGTAGAAAATAAGGAATGCCAAACGGAGGGCGACACATGC
ATTGAGTCAGCAACACTGATCATTGGCAACGTCAGAGATGGAAATGTGAT
CAGGTTCAGCCAAGGCAACAGAATCAGTATGGGTCAAGAGCGCATGTCTA
TCGAACTGCCCTATTTTGGTGAGTTGTTCAACATTCGCAAGGCCTCTGGT
GAATACGTCCAGTTGAATTCAGTTATAGGTGTGAAGATATTGTGGAGCGG
ATCTACCTTGATGGTGACGGTGGACCCAGGATACGTGGGCAACACTCATG
GACTTTGTGGGGTGTACAACGGCAACCTTGGGGATGACTTCCGTACTCAA
CAAGGCATAATTGTTGACAACGTCGGCGAATTCGGCAACAGCTGGAAGGT
GGGCGGCTCCATGTGTCCAGATGTAGGTACAGGGCCGGACATCATCAGAC
CTTGCGACCTCGTGACACCACGAACTAATCAAGCAACAGAGCTGTGCAGC
ATCATCAAAGGCGCTGTCTTCGCAAACTGCCACGCCGAAGAAGACCCTGA
CCACTATTTTGGCACATGCAGGGATGACACCTGCAGATGCGAGGATCCGG
GATTAAGTTGCTTCTGCGATGCTGTTGCTTTCTACTCATATCTGTGTATG
CAGAAAGGGATAATCATTCCTTGGAGAGATAGCCAGGAGCTTGGGGGCAT
ATGCAGTGCTACATGCAGTTCGGTTGGTGGCGTACATATAGAAAGCTTTG
ACGGCAGGCGATTTGATTTCCACGGCCGATGTCAGTATGTGTTCGCCAAG
GACAAAGGATGGGACCTTTTCACTGTACTTGTAGAAAATAAGGAATGCCA
AACGGAGGGCGACACATGCATTGAGTCAGCAACACTGATCATTGGCAACG
TCAGAGATGGAAATGTGATCAGGTTCAGCCAAGGCAACAGAATCAGTATG
GGTCAAGAGCGCATGTCTATCGAACTGCCCTATTTTGGTGAGTTGTTCAA
CATTCGCAAGGCCTCTGGTGAATACGTCCAGTTGAATTCAGTTATAGGTG
TGAAGATATTGTGGAGCGGATCTACCTTGATGGTGACGGTGGACCCAGGA
TACGTGGGCAACACTCATGGACTTTGTGGGGTGTACAACGGCAACCTTGG
GGATGACTTCCGTACTCAACAAGGCATAATTGTTGACAACGTCGGCGAAT
TCGGCAACAGCTGGAAGGTGGGCGGCTCCATGTGTCCAGATGTAGGTACA
GGGCCGGACATCATCAGACCTTGCGACCTCGTGACACCACGAACTAATCA
AGCAACAGAGCTGTGCAGCATCATCAAAGGCGCTGTCTTCGCAAACTGCC
ACGCCGAAGAAGACCCTGACCACTATTTTGGCACATGCAGGGATGACACC
TGCAGATGCGAGGATCCGGGATTAAGTTGCTTCTGCGATGCTGTTGCTTT
CTACTCATATCTGTGTATGCAGAAAGGGATAATCATTCCTTGGAGAGATA
GCCAGGAGCTTGGGGGCATATGCAGTGCTACATGCAGTTCGGTTGGTGGC
GTACATATAGAAAGCTTTGACGGCAGGCGATTTGATTTCCACGGCCGATG
TCAGTATGTGTTCGCCAAGGACAAAGGATGGGACCTTTTCACTGTACTTG
TAGAAAATAAGGAATGCCAAACGGAGGGCGACACATGCATTGAGTCAGCA
ACACTGATCATTGGCAACGTCAGAGATGGAAATGTGATCAGGTTCAGCCA
AGGCAACAGAATCAGTATGGGTCAAGAGCGCATGTCTATCGAACTGCCCT
ATTTTGGTGAGTTGTTCAACATTCGCAAGGCCTCTGGTGAATACGTCCAG
TTGAATTCAGTTATAGGTGTGAAGATATTGTGGAGCGGATCTACCTTGAT
GGTGACGGTGGACCCAGGATACGTGGGCAACACTCATGGACTTTGTGGGG
TGTACAACGGCAACCTTGGGGATGACTTCCGTACTCAACAAGGCATAATT
GTTGACAACGTCGGCGAATTCGGCAACAGCTGGAAGGTGGGCGGCTCCAT
GTGTCCAGATGTAGGTACAGGGCCGGACATCATCAGACCTTGCGACCTCG
TGACACCACGAACTAATCAAGCAACAGAGCTGTGCAGCATCATCAAAGGC
GCTGTCTTCGCAAACTGCCACGCCGAAGAAGACCCTGACCACTATTTTGG
CACATGCAGGGATGACACCTGCAGATGCGAGGATCCGGGATTAAGTTGCT
TCTGCGATGCTGTTGCTTTCTACTCATATCTGTGTATGCAGAAAGGGATA
ATCATTCCTTGGAGAGATAGCCAGGAGCTTGGGGGCATATGCAGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000044 | genome | Sc0000044:2033507..2036891 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96954_cuf3 |
| Biotype | protein_coding |
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