transcript:BL96857_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96857_cuf0
Unique Nametranscript:BL96857_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96857_cuf0

>transcript:BL96857_cuf0-protein ID=transcript:BL96857_cuf0-protein|Name=transcript:BL96857_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=501bp
MSARRWDKLLALGTLLLCLQHSVSQNTTTQATTDAAGTTNGISMATTMSI
TPLSTTEQASSSTPTADSVTSTGSVTNVNNMTSDTTNTTNEMTSPMSHDV
TTAVITTAPLLTTTILLTPSNPTQADSNVTTMATGTTSQNSNTTENVTMS
TTTRTQTDGTAAGSNMTASNTMATTLMTTPDNTTPTVHSNMSTPGNEAGV
MTTTDAIETSPSLVNMTSTEMMLSTIQPTTTTSSTTENATMEMMTNLTTT
QMSTSSSEMMTTTQASNDTDMTSTASTEMALTTEDSTARMPVINATEAFN
TSAGTNMTTPEVVATTELMTSTPGSVNTTDMMTNMTTTEMMTNMTTAEMM
ANMTTTEVTTNMNTPEVMTNMTTTEMMTHMTTTEVMTNMTSTELLTNMTT
TEMMTNMTTTEMMTNMTTPEMMTNMTTTEMMTNMTTTEMMTNMTTTEMMT
NMTTTELMTNMTTTEMMTNMTTTEMMTTAAADMTTTKMMTTPETNVTTTE
X
Run BLAST on NCBI

mRNA from alignment at Sc0000007:5473330..5489138+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96857_cuf0 ID=transcript:BL96857_cuf0|Name=transcript:BL96857_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=15809bp|location=Sequence derived from alignment at Sc0000007:5473330..5489138+ (Branchiostoma lanceolatum)
CTTGACGCAACGCGAAGGCACGACACTTCAATGTGGAACGCCCACTTCCT GTGACTTGTATTTGCATACTTCGTGTGCGTGTGACACACCGTGGTTGCGG GAATGGACCGGCGTTGTTTTAGCTGTGTATCGTCGTCGCTGTGACTCAGA CAACCTCAGTGTTTCCTCTGCAGACGATAGGACACCACGTGAGCGCGGGA AGAAACGTCAGTTCCCTCAGGCGAGTGTCAGTTGCAGACGACGTTTATTT CTCTCTCGCGCGCGCTGCGGACCGAGGCTTGACGTGTGGAGACAGCTCAC TCGGATTTTACCAGAACTTCACTCACACTCGGATTGAATCAACAAGTGGT CGAATATCTAACTCGGCTGTTTCGTTGAGGGAAAACTAGACGACCCTTTT TTTGGTCAGGATCAACTACAGAACGCATCGCTAAACCGACACGCTATACC GGCTGACGGCATTCTTTCCAACAAAGGCTCTATTGATCGTTGGCTCGAGC TTGTACACCACTCACTCTTTTGACTTGCAGAGCGGCACATCCGCGGGTTT CTTGCGCCACGACCTTGCACTCACATTCCCTTCCTAAGGACAAAAGAAGC AACTCAAGATGTCGGCGAGACGCTGGGACAAACTACTTGCACTAGGAACT CTCCTCCTTTGCTTACAACACTCCGTCTCACAGAACACCACAACCCAAGG TATATATGTTCTGATTCTTGGCTCGTATTGTGATGTACGAGTCTTGTTTT ACAAATGTGTATAAACATCCTCATTCAAACGGCTAAGCAAATAGATAGAG CATTCTTTCTCAAGCAAACCTTGTAGCAAACCGAAGCAAAACGAATACAT TTTTGACGCAAGATACAATCAAATCCAGCCAATCCTAAAATACACACAAA ATCTACGCCTCCCTACCTGCTTTTTTTTATAAGCTCCTTGATATGCTGAT TTAATTTTCTTTCTCTTTTTCGTCTGTGGGAGAGATCCCTTTGGCTGGCA TTCTTTGAAGTATACAAATCGCGCAATCGGACTATTACCTGGAAAACAAG TGGGTGTTTGAGGGTAACACATGTACCACTAAAATCGCGTCACCTGTTGT AGATAAGTATATGAACGTGGGTTAAGTAGCCGTATGTTAAGTTCTAAAGC ACACCATATTCGGTCGTCGAGGACGCGTTCGCGGTCGCGTTTCGACAGAA GTACCAATTTCTTGTACACTTCACCTCTCCGGAAGAAAGCGGGGGCTTGA GAGGGCTTTGGTTAGCTGAGCTCGGAGACTTAGGTAGAATACACCTGTCG CGTTAAATGGGGGTGGCGGTATTGATATCGACTCGGTGAATATTTTGGGC GCGTGCTGAGGAAATATGATGAGAGAGTACCGTACAGGGGGGTGGATGTT GCTTTTAATTGGTTACAATACACCTGCCGTTTGGGTGACGGGATAGTGGA GTAGATATCACATATCAGGTGCGCCCTACATACATGTAGCGTTTTTGCCC TACTACCAATACAGATATTGTAAGTAATATTCCATATTGATCTAGTAAAA TAATTCAAGTACAACTTATCTAGGAGTGCACATGAAAGAAGTGTACATGT ATGCACTATAGGGGGGGGGGCGCAGTGATAATACTTTTAGTACACAGCTG TGGCCATTTTTAATGGTTTCTTAAAATATCCAAACGTATGTGCCTGTATT ATATCATAACTGACGGGAAGGCTTTTTATAATTGATATTTTTGCACCGAA ACACCAAATTTGTCAAATATTACATTTTTTTACCAAAGTGTACAGTGAGC TCCGCCCTGTTACAGTGCCACTGACATTCCTCAGCCGTGACAGGTAGCAA CGGTTGTAATGTCGTCTGAGGCGCCTGTCAATCACGATTTCTGGGTAAGG ATTGGCTGAGCAGGAAATGAGGGTTATGAGGATTTGTTGAAGTCTAGCTC TATTTTGAGGCCTTTTTGTGTTTAAATGTTTGTGGGGGGGGGGCTGTAAG GGGGGTTGTAAGAGGTGAGGGTTAAGAGACGCGCGGAAAATATGTCGTCC GCTAGGTGTGTCAATCACACTCAACAACTTCCGGTTATAAATACCGCTGC GATAAAACCTGCAAGCCATTCTTATCAGTCATTCGTTGATTCATTTTATC ACTCACTCACTCACTCACTCACTTATTCACTCATTTATTCATTTTGAGGA GGTAACTGAAATTTACCTAATACCGTAGGTCACGTCTACATCATGGATAC ATTTCTTGCGTTTGTCAATTGAGTATCTGCGAATCATTTTATGCATCTTA GATTTTGAATGTTTGCACAACTTAGCCGTATTCGTCTTCGGTCCACTTGA AGGTTTTCTAGACACTTCAAAAGACACGGTTTAATAGACGCACGCAACAG GTGGGGTCAGTGGACCTCAAATCTAAATACAGCTCGCCACGCCACATTGA ACTGTATTTGAAACCCTTGAACTGATGAAACAAAGCTCGCCATAGCATAT TGACCGTAGTTAATGGCGGTGTGTCATTGTGTGTTTATTTTTGCGTCATG AGGCCAGCTGTGTCCGGGTGGCAAAACCATTCATGCCAAAATTTATACGT AGAGACATACGTAACAAGTGTCAAAAGTATTCTTTCGTGGTTATTTATGT GCAATTCAGTTGAAATCGACAGTGGTTTGCGTCAATTTAAGTGTCAGTGG TGGAAAAGCCATTCATGATCATTTTTCATAGTTCAGAATTCGTAGTTGGA AGGGGGGCGGTCATTCATACGTAATACTGGTAATATCCTGAATATGTAAT TCTGTGGGTTTTTTTTAGATAGAAATGACTACAGGTCTTTATCTCAAATC TACAGGTGTTCGAGTCAATATTTCAGTGGTAGAAAGTCACTCATTTAAAG TGTGAGGGAGGGGGGGCACACTTACGAGTCCTGAAGATCCAATCTCTAAG CAGATGTTTGTTGGCAGGCAAAATCGGTACGCTTTCTTAGCTGCCCGTTT CTGTGCCAAACCACCCGCTGGCACAAACATGCAGTTTAATCGGTAAAATT GTTGTTGTTGTCCTTGTTGTTGTAGGAAAGCGAAACGATCTCCCCCACAT CTGCTCCGAGATTAATGAATAATGAAACTAGTTACAGATTCGAAGACACG TGAGTTATTGCCATGTGACGAATCTGTACAGTCACGATCTAGACGTTTCT AAGGTTTACTGCCGGAAAAGACGACCTTCTTGACTTTGCGGCGTGACAGA GTCAATGGAGATACTACAAGGCAAACATAATATTCCCCCATTCAAACAAG CCGGGCTCCACTTGGCAGAAAATGGCTGTGCGCCACCCACGGTAAATATA GCCCCTTATTCGTGCAACAAGTGGCTATTCATGATGTAGGTTGGGTGCAC AGAATGAGGCGGTTCGTCAAAATAAGATGCTTGAATCTTAGGCTGCGACA TTATGATGATGAAAATTGTATAACTAATGAATCAACGATGAGAAAGATAG AGTTTTAATTGACATATGCCTTGCTTAAGCAAACAAGGTATTGTTTGGAG AATAAGCTCGAATGAGAGGATTTGAGATGATAGAATGAGAATAAAAAGCC TCTCCCCTTCCCTTTCCCTATCATTCTCGTATATCAACATTGACGTACCC TGTATCAAATCATATATTTTGTGTCAACTATCTATTGTTGACACAACTGT CTATTGTTGACATGGCACAAAAAGGAAATGTCATTTTTGTTAAAGTAACT AAATACGCCATACTAACGTTATATCTAGGGTTTAAGATAGTAGCTTGAGA TTGAGATTGATTTTTTCTTTTTGTTGAAAATGTTTTTTAATGTTCTGGAC TGCGATTGTTATGGATTACACTATTTTTAGTCAAAATTGAATGGCAAGTT ATGACTAGAAAGGCATGTTGATAAAACATGAGTATGCAAACGTGCGTAGC AGGTCGGGGTAGTGTAGGATCTGTGGAATGTAGAATATTCAATCTTAGAA AAGAACAAACAATAACGCCAGGAGATACGTGTGAGACGTGATTACAAGAA GGTAGGGTGGGGCCGTGGGGGCACTACACCTGTCAACGTAATATATATTT GGATTTAGATTTGGATTTATTGGAATTGCAACACTGCAATACACGTGGGA CACAGGCAGCTTTTGCTAATGTCGTGACCCACACACATTTTTACCCGATT TTTACACTTGGGTGGAGTGGGGAAAATCGTGTTAAGTGCCTTTTTATATA TTATTTTTTCCCCTTTTTTCAGAGGTTAGGGGGATGCACGCGGGGGGGGG GGGCTTAAAAAAATCTCAAAGAACCCGATACCGCTCCTCCGCCTCCGTCC AGGCATGGCAATAAGTGTGGCCACTTTTTGGTCGTTCCTTCGGCCATTTT CAGTGGTCATTATAGACAGGATTGAGTGTACCTGGTACGTGATACTTGTC ATAGGTGCTTCTTATGTATCTAATGTATTAGGGACACATAAACAACACTG CATTATAACTAAACTGACTCACATCTATTTTACAATCACACGGGGATATC GTTACTCTAGAGCTAACAGTCACCATTCATGGATGTGTCCATCTCAACGC TTAAACTCCTGCTTTTCTATCTAAATTATAGACTATGATCGGTCACTATT GCCTCCCATTCTTTAGAGCGTTTGCTGCTGTTAAAGATATATTATCACAG TGTTCCCCTTTTCCTTCATACGTGCGTAGCAAAAAAGACAATTATCCCAT CACGAAGTGGATATGTTAACAAACCCTTGTCTTCACGCCAGGTTACACAT GTACATGTGTAACTCTCCTTGAGCCTAAAAGAAAACACTTCTTTGTCATC TGTGACAACATAAAGAACATGATTTCCTGGTAACCTAAGCACACGTACAT CTAGGGAACATGTCATCACACGTCACCAAAGCAGAACGAATGGAATCCTT ATCTTCCTAACTGTAAGCAAACGTTTTTCCCACTCTAATTGGGAAACAAA TCTCAAAGAATCAAACAATTGGAGTAGACAAATATTGGCGTTCACTATCA GTTGCTTGGGTTTCCCCCTTTTCCCTTTCCCGCTTTTACACAGCTAGTAA CTACAAAAAGATCTTATACAACAAAAATATCACTCGTCGGCGTTTTTCTT TAATTTTCATCTCCAAATATTGACTTGTGGACAGATCTTCTGAAGTTTAA GCTTAATCAAGTCTTTAGCAAGACAAGTTCTTTGGTAAAAGATAAATGTT TGCATTTAATGATTGGTAAAACTTGCTAAGTAGCTGGCGGTATTGGGAAT CTTAGCTGCAATGGTATTCTTAATTCCTTAGAAGTTTGTGTCCCGTGTAT CCATGAAGCACTGTTTGCCTGCCCTGAACGACTAGCACTGTTAGGTCACG TCTTGTCCTGATTCGAAAAGGTCAAGTAATTGATAACACGTTACATACTA TAAAATGTCACGCCATTTGTCGGGAACAAGATTCTTTTAGGAGGGTTTGT CGAGCGTATTTTTGAGAATCCCACACTGAGAAATTACTTAGCTTCAAGTT TAGTGTTTGATTTAAATCATTGCGCTTGTTGGTTGACGAGCTATACGGCA TTGGTGACAGCGAAAAAAATGTATCATTAGCTTCTAAATCATTTCTTGGC GTGGGGTTCTTAAGTATGTACTCGACAAATATCATACAATGTACCTACCG CCAAGAAGACCTTAAAACAGCTCATACACATTCCAACATTTATAAGATGA TATATCATGATCAGATGGCTTGATTACAGCAAACTTCGCCTTAAGAGGTT CAAATTACCGTCTTAATTGACCTCATTAAGACTCTTAAAACCCCGCCCTT ATAACATCCACCAGCACATGACCTTTGTGCACCAACCTTAATATAGATTT AGAACATGCCTTAAACGTTGCAAATTGCATCAATAGTTCTAAAAGCAAAT TCTGATCCCAAAGTACATTAGTTTGTTTGCTTGTTTGAACCTTTGTTCAT TTCGTAGATAAGATTAATCTTAGGAAATGATTGTTTTCTGTCAGTAGCAG ACGATGCCATACGTTGTACCTTGTGCAATTATTGTTCAAGAAAGTTTATC ATAACATCTTGAACATTTCGCAATGTTATCCTCTGTGAAGCCGGGCAGCA TGCACGCAGCAAAATTTGCTTAAAACCCCTCATTTATACAGGAAATACAA ATAACCGAAGGAGTTTTTAGCCTACCCAAGATTATTCTCCAAGCAGAGGT TTCGTTGGGGGGGGGGGTAGTAGTGCCCGCGATCTAGAGACAACATTGCG AATATCTAATCTATTACACAAGCCGCCAACCGTCAGGACTTCAAAGCGGC TAGACCCCGAAGTGTTTAATTTTGGGGTGCAATATTACCGTGGTTACATC ACATGGGGTAGACATTTGCGCTCTCAAGTGTTTAACTACAAGGCGTATCT ATCGATGCAATCTGTTATACAACATTGGTTACAAGACTGGTAATTTACAA TATGGCTCATATTGAATTTTCTGGTAGCAAGTACTCGTGTTGCATCAAAT GACATTGGTATATCTTGATGTATTTTTAGACGTTTTTAGAGTTTGAAAAT AGCGTATTCAAATGGTCAACATATTCAACGACACTCTAATTTGAAAATGA AATAATTTGCTGTACAATGACTTCGCAAAATGTAAAATGCTTTGCAATGC TAACACAAGAAGCTGTGTGTATACGTTTGTGGGTACACGCACAACGCACA GGAGTTACGCCCTGTGCACATGTTGATACATAAACAAACAGGTACGTAAA TTGTCTGTTTACGCCAACGTATCCGATTGTTTACGGGGATACCGTGCAGT AATTCTACCCTCGTGCAAGCAGTCAACTGTGTCAATTTCGTGGAAACCGT TCGTTCTACGTGCATATGGTAGCATTATACTATTGTCAGCCTTATTGTTT CATATCCCTACTTTGCAATTGCTATTCTATGGGAAGATGTTTCGTATTTT AGACAGTGGTAAATCCTGTGTTTTAAAAATGACTATGTAAAAACAATACA AGGTAGGTGAAAAACGACTATGCGAAACTCTAGCGAAATGCATATTCCCA GTACCATGAATTCGTGACCCCGAATAAACCCGCGGCAAAGTTTTATGATT TACAGTATGATTTGATGTCTGCAAAGTGGCCATGCTTTAAGATAGACATT TGCAACGTATTAACAAGGATGCGCTTTTAGTGACCTTTCGCCCTTATCTC CAACCTATACCCCCCTCCCGACTAAGCTAAAGCAGCCTACTCTCAAGCAG AGGTTCAGCTCCGGTTGGTTTTTGACGTGTTTTTAGGCGTTTTTGTCGGG CTCATATATTTTGTCCCGTTTTCTTTATGTCGCCAAGCCAAACTAGAATC AGCCATCGTCTATTGAAGTCAATTGTGCTTCTTCTTCTTCTTTTTACCCG CCGGCATTTTTGCACAACAAACTTCAAACTTAATCGATTAGGACCTCTCG AAAGCGACATATTTCCACTTCACCACCAGTCCCTGGCTATTGTAACCATG CCCCCATTTTGACCTATTTTTATCGAATACGGTAGCACTTGTCGCAAGTG TTTTGAAGAGTAGCGATAGTGAAAAGAAATTCATGTCAATTTTTTTTCAA GGCTCTCTCTTGAAATTTAGACTAAGGTTGGTGAGTAGGCCTGGGAGGGT AAACGCCGGTCAGAATTCAGCAAATCTTGACGTCACTTAATTCTCATCCA TGTCCAAAATTTTCATTCAATTTGTAACTGAATTCAAATTACTGTTTTAG AAGTCGCTGCTTTATCTATAGTGGTGAACACACTTATTTTGTAACATGCC CCCCTCCCCAAACATTCCACCATTCGCGTCTTAAAGGCGGGAGAATGTGC CCTCTTTAAGGCCCCTAACCTCCTTAAGGTCGGTGTCAGGTCACCCTTAA GAAGACACCTGCCCGCGAAGTGTCCTTGGGTGTCAACACCAAACACAGGT ACGCAAACAAAGCCCGTTTGTTCAATGCAATCACCAAAGTTTGCGGTGTA GCAATAAAATCCACATGTGTAATCCCAGTGTCTAAACCATATTTCTATGT ATTTCTATGTTTTACTAGTTGCTCACGTCGCCTTTCACCTACGAAAATGC TTAAGAAACATGTGTAAAACACTGAGCCGCACCTTACATCTGCTTGGAGA TTACCACTGGTGGTCCAAGCATTCAAGACTTCGTCTGAAAGTGCCTGCCG ACAGTTTTCAGTTAGATGCTCTCGCTTGTCAGATAGACTTAGACAAAACT GGAGCCAAATGTTGGGCGTCAGGAGTTCGGAAGTCCCTAGAGGAGTGCGG TTTCGGCTACATCTGGCATTGCTCTTTATCCCCAAACACAGATACGTCCC AAATCATTAATTCCATCAATCAACGCTTAAAAGATATTCACTTTCAAACT TTCCTAAAAGAAATACACAATGATAACAAAGGTGGATCAGCTCGAAACAA ACTGAGATCCTACAGATTGTTCAAGTCCACATATAACGAAGAAAAGTATC TAAGCCTCGAAAATATACGGCATAGGACCGCAGTCACAAAACTCCGTATC AGCTGTCACAGACTTCACATTGAAACCGGACGTCATAACCGCACTCCCCT AGAACAACGTATATGTAGACATTGCAATTTAAATAGGATAGAAGACGAGC AGCACTTTTTAGTAGAATGTAGTTTATACAACGAAGAGAGAGCTGCGCTT TATAAACTTATTCAATGTAGCTTTCCCCATTTTATACATCTTTGCAAAGA GGAGCAATTCATATTTCTAATGACTTTAGGTAAACCCTCTATTATAAAAC ACACCTGTACGTATATTTACAATATCACCAAGAAGCGAGAAGAGGCCAAA TTAACGTAATCATTAGATTAGTGTTAGCTTATCATTGTAATGTATATATA TGTACTTTCAAACTGTTATGTTTTCTGTTGTGACCTGTACTAAACCCAGT GGGTATGTGTGTACAATAAAGGTCTTCATTCATTCATTCAAAACAACGCT TCTATTTTCCCATTGAATAAACACAACCCGTTACAGTATCTATATCGGTG GCTTAAAATGGTTTCACCCTTTTGGGTATCCTATTGAATCGGGGCTTAGC TAGAACAAACACTTATATGATAGCCTGTGACCTAATTACGTGGACAGGTA GGTAGGTAAGGTAAACCAGTTATCCTCAGTTGAAGGGATACTTTTTCAAG TAGCTAGCTATGGTGGTAGTGAAATAAAGCTTCGCTACTGATCGCATTTT CAGCAAAGCACAGCGGGTCACCCCTATGGCCCTACTCTTCTCCATAAGTG TGTACTCTTCCCTATTAGTGTGTTGGGTTCTTTTACGTCTATACATTATA CGCTACAGTGACTTATTCACTTACGATTGACAAGCTTACGTTATTGAAAA CCAGTTTGTAAATATTTGAGCCGTCCAAGAACGATACAAACACCTCAAAA CAATCGGCGCGACAGAGCTTGTTACATCCGCCAGATAAGCTAATATATAA CACAAATATCAGTGTGTCTATAGCGCCACAGTCATTGGTCAAAAACACTC GGATGAAAAACCCATTATAACTTATTGTCTCATTGTATACGGATCGTAAA GCTTGCTTAAACATCGCTGGATGTACTGTTTATCTAGTGTCAAACCTGTC TATAGCGACCACACAGGGGGCTTGGATAACGTGGTCACAGTCGACATGTG GATATCTTAGTCAGGATTCTTAATCAATGCTTGTGTTAATGATATAATCC ATATAAAAGGGACCATCAAAATAGGGGACAACAATGGCCAGGTGTTTTTT TTTAATGCAGAGGCGGTCACTGGTATAGGTTCGACTGTATTCTAAACGTT AAACATTGTTGAAATTCGTAGCTTTACTCAAGCCTACGTCGAATCCTTTT CAATCTTTTGTTGATATGACAACGTCAGGGTCTAAATCTAGGCTACAATT CCACTCAGCTTTTTTCTCTTATCCCATTACAGACCCGCACTTACGCTTGT CCATTGTGAACTAGTCCTACGATATGTGTTAAGCTCCAGTCCCTTTTCTT GTCTGGGCCTTACCCACTTAGGAATTACAAAGGGCGAGCTTTAGTCGCAT TTGTTTGGATAAGGGCTAACACAACCCCCGAACTCGTAATGTAGACAGGA ATCCCTGGGAAAATAGCACCAGAACTAACGCTGTGGACACAGAAAGTATG CTATACACACAGTTCTGGGATGACTAGCGGATGTGTAATACAACAAGTAT GGTGGGAAAATTGTGGGNGAGTGTGATACAACAAGTATGGTGGGAAAATT GTGGGAAAAGGGCATATGAAAAGACTAGAGGGAAACACTTAGAGAAAAAG ACAAACTGAACGGACAAAGAGAAGGCCACTTTCCGAAAGTTATTGCTTGA CAAAGTCAACAGGTACAGTGTTTTCAAACGCAACCTGATGCGTGAACAGG ATATATGAAGTTGGGGTGGGGGATTGGTGCCGGTAGTTTTGAGACTGGAA AATTGTGTAAAAAAAGGTCTCCACTACACATTAGTTATATTACGGCAAAA AGAATGGCATTTCGAAAATAAGCGGCGTAAAAAAAGTGACTGAAAGCAAC TTATCCTAATGCTTTTTTTTTTACAAACAATTGACAATCAATAAGGGTCA AAGGGCAAGTTTTTGTTCAAGGTTTTGCAGACACTAAATCTATATAGAAA TCTATCGGCATATATTGAACTAAGATGTATACACTGTTGTACACGTTGTC TTATGTGCACTTTGCTATGAAATAACATTTTCGGAAATATTTCGTCACGC GTTTCCATTTCAGATATTCCCCTTTTCGGTTATCATTGATCAAAATGCAT GGTAGCTCGCCTTCGCAAGTAGCTCTTTGAGAGAATAAGAAAGAGAAATT TCCAACAACACGACTAAGCTCTCCGGCTTTTGTTCTCAGACGTCTGCAAC TGCTTCCAGCCCCTGACCTTTCTCCTGTGTACGTCTTGAATCCGCCTAGA CGAATTTGCGGTTTTCTTTAGAACTCGATGGAAAATCACGAGTCGAATAT GATTCTTGATGAAAGAAATGAACACGTACTTGCAGCAAGGTGTGTCAGTC AGTTAAAACAAGAACAGATGTTGCTAGGGTTGCTATCTTGTGTTTTCATC TCTCTCGCGAACTAGGTTTATCTATAATTCAAAGCAAAGCTCGCTAAGAA ACCTCCCAACGCGATATGTCACTAAACGATCTTGAACTTGGCGATATTTC TCACAGTTAAAGAAAGAGCTCAGCTTGTCAATTCGTTCACGCACTTCGCC CTTACCAAGGCGACTTCAAGTCTTGCCTCTGATCCTGAGCACAAACAATG CGTCTTAACCTTGCCATTGAGAAAGGTCGAGTAGGAAAAACGTTTTCAGA TCAACAACAGATGGAAAAAAAAGAAGAACATTGAATGAGATTTCGTTTCA AAGTATCTCAGAAAGTTTTGATTGTAACTCGTTCAACTCGAAGGAGAAAT TTATGAGGGTATTAAACTCGGGGTTAGGTTCTAAAGTTCACAAAGATGAC AGAATCCCAATTCAGCGCATGCGCGACATNAGGAGAAATTTATGAGAGTA TTAAACTCGGGGTTAGGTTCTAAAGTTCACAAAGATGACAGAATCCCAAT TCAGCGCATGCGCGACATAGTTTTCCGCATAGACGTAGGCATTCCTATGA CCTCTGTGAAGAACTAGACTTTTGACTGTTTGTAAGTTTTCAGTGTTGCA CTTTCGATCTCCAAGCAGAGGTTGGATGGATAGATTGTTACATTTTCTGA TTGGTGCCATTTGTTATTACGAGGGATCGGCCGTCAGAAAACGGGTACCA ATTAAAAGACTGACTCCATCCACTTCGGCTTAGAGTGAAAGTTTGTAGGT GATCAGGATTTAAAAAAAAGTCATGAACGGTTTTGTAGGATTTTTGACGC TTTAGTCAGTCTTGGGTAACGTTAGTGGAATTTGAGCAATCGTCCATCTG GCAGTCGTTCTTGGTACTGCGGTAGTTACTTTTATTGCTATAAACACCGT GATTTTATGGTGGGTGGCAGCCATAAGCGCCATAAAAAAAAACACATACA TTATATTGAGTGGTGTGTGGCCTAGTGGTTAGACCAGGAGACGCTGGATC GAAAGGCCGGGTTCCATTATTGGTACTTTATTCCTTGCTAGACGTTGGTC TATGCATTTTACACAACCTTCCTCACTCCACCCAGATGTAAATGGGCACC CGACTTCAGTTTGGGTTGTAAAAAAAGTGCCAGTGCCAAAAGAGGGATGG GATCCGCCTTGTCCAAGACATGGTAGCATAGGTAACAAACCACTGCCCTT AAGGCCTCTAAAAAGGCTATGGACCTACCTCTATTCTATACCTTGTTTCC ATGAACAGGAGTTCTTTCTACCTGCAGCTGACACTATATTGTTAGGTGAA AGTCACAAAGTTTACAATCGGTCATGTTGCTGTTGCACATTCCTTTTGCA AAAGCACATACCCCCTCAGGCACGGATGCGCGGGTGTTTGGAACCCAAAA TAGGTAACCAATAACGGGAAAACGTGACTCCTCGGTGACACAATCGTTCG CGATCTTCCCAAGTACAACTGGGGCATTGTCTCCTACGGTTTCTACCTGT AGAAATGCCTTTTTCTAAGTCACGCATGTCAAATACTTCTGGAGGAAGCC CAAACAAAGGGCGAGGTCAGATGGGGGACTCATTCGCCCTTGAAGGAAAC GAGTGAAAAGCTTTGAAAGGGCGGAAACCTTTTATGTTGCCAGTAACTCT GCATACAGAGTTGAACATAACGCTATTATGTTGGAATTTCTGTTATTCTA AACAACGACAAGTGGCTATTTTTTNAACCCAAAATAGGGAACCAATAACG GGAAAACGTGACTCCTCGGTGACACAATCGTTCGCGATCTTCCCAAGTAC AACTGGGGCATTGTCTCCTACGGTTTCTACCTGTAGAAATGCCTTTTTCT AAGTCACGCATGTCAAATACTTCTGGAGGAAGCCCAAACAAAGGGCGAGG TCAGATGGGGGACTCATTCGCCCTTGAAGGAAACGAGTGAAAAGCTTTGA AAGGGCGGAAACCTTTTATGTTGCCAGTAACTCTGCATACATAGTTGAAC ATAACGCTATTATGTTGGAATTTCTGTTATTCTAAACAACGACAAGTGGC TATTTTTTGGGTGTACAGATAGCCTCCATAGCAGGCTTCGTGGAGACTGC TCACGAAGCCTGCCATGGAGGCTGAGCACTCACACACCATCGTAGCCTCC ATAGCAGGCTTCGTGGAGATAGATCAGTCACGAAACCTGCTATGGAGGCT AGGCACAGAGATTGTAATAGCCTCCTTAGCAGGCTTCGTAGAGACCAACC ACGAAGCCTGCTATGGAGGCTAATCACAGAGACCACGATTAGTATCAAGT GCGATAGTCTGGCTGCACACATGCCATGTCCATTGTTTGACATGTACTTC AACTGACTAAAAAATTATATTGGGAGAGGTAAGGAGGCCTGGGGACGACA GGGTTAACTAATAGCCTTTCAGGGGCCTTAGGGAAAATGGGTTGTTGATT CAGTGTTTTGGGCATGCGTATTGGAAGTCGTGTCAGGAACGGACATGATC TAACCACAGGTATTCTCGCGATGTAAATCCTGGGCTCTGTTCCCTCATGG TAAGAGTGCTCGGTCATATCCGCCGTGTGTTACTCGTGAGAAACTACGTA TGTGTGGGCCAATTTCCGTGGCCGCACAGGGTGCGTCTGTAATACGATGA ATCACAAAAACACAAGAGACATTTGCATTAAGACGTTGTAACAGAGGCGC CTTACGAACATTGTAGGTACTGCATCCTGGTATTACCTCTGCTATTTCTT CGACCAACCAGTTGGTCTATCTTTCCATGTATTGCTCACATAGGTTTAAC TTTGTTACCACACAAGATTTCTCGTGAGAAAAACAATGAAAACACGATCC GACTGTAGTGAAAAAAGAAGAATAGAAACAAATTTCCGAAGTATTTGCAA ACAGTTTTACACACTTTATCACTCTTCTAGCCACAACAGATGCAGCGGGG ACGACAAATGGCATCTCCATGGCGACGACCATGTCCATCACGCCACTCAG CACGACAGAGCAGGCCTCGTCGTCAACTCCAACCGCAGATAGCGTGACGT CGACAGGAAGTGTGACAAACGTCAACAACATGACGTCAGACACGACGAAC ACAACAAATGAGATGACGTCACCAATGAGCCACGGTAGGACAAAAGTTGC ATTTTCTGATGTCGACAATTTTTCAATGTAAAATTCTTTGGTCAGAATCC TATGCAGACAGAGGTCACGAAAACACATGACTTTTGGGGTTGGTGCTGGA AAAAGAAGAAAACAATAAGTTTTATCAGTAATGAATTATAGAGCATCCGA CTTAACACAAACAAAATTGAACCTAACAAATTCTGATGTTGTTATGAAAG TTACTATTAAATTTCATCTGCAGTAATATTACACACTGTGTACTCTCCAG ATGTGACGACAGCCGTGATAACAACAGCGCCTCTGCTGACCACCACCATA CTGCTGACACCATCAAATCCCACACAGGCAGATTCCAACGTTACAACAAT GGCCACGGGTACTACGTCACAGAATTCAAACACAACAGAGAACGTCACCA TGTCAACAACCACGCGCACTCAGACAGACGGCACAGCTGCAGGTTCAAAT ATGACAGCGTCCAATACCATGGCAACAACGTTGATGACCACACCAGATAA CACCACACCAACGGTACATTCCAATATGTCAACCCCTGGGAACGAGGCGG GTGTCATGACAACTACTGATGCCATTGAAACGTCACCTAGTCTCGTCAAC ATGACGTCAACAGAAATGATGCTGTCTACCATACAACCTACAACCACTAC ATCATCCACTACGGAGAACGCAACCATGGAAATGATGACGAATTTGACGA CAACGCAAATGTCGACGTCATCGTCCGAAATGATGACGACGACGCAAGCC TCCAATGATACAGACATGACATCGACAGCATCGACAGAAATGGCTTTAAC AACAGAGGATTCTACAGCAAGAATGCCAGTGATTAATGCAACTGAAGCCT TCAACACATCTGCAGGTACAAACATGACTACACCAGAGGTGGTGGCAACA ACAGAGTTGATGACCTCAACACCGGGCAGTGTAAATACCACAGATATGAT GACCAATATGACTACCACCGAAATGATGACCAACATGACAACCGCAGAAA TGATGGCCAACATGACTACCACAGAAGTGACAACCAACATGAACACCCCA GAAGTGATGACCAACATGACTACCACAGAAATGATGACCCACATGACTAC CACAGAAGTGATGACCAACATGACATCCACAGAATTGCTGACCAACATGA CCACCACAGAAATGATGACCAATATGACTACCACAGAAATGATGACCAAC ATGACCACCCCAGAAATGATGACCAACATGACTACGACAGAAATGATGAC CAACATGACCACCACAGAAATGATGACCAACATGACTACCACAGAAATGA TGACCAACATGACCACCACAGAATTGATGACCAACATGACTACCACAGAA ATGATGACCAACATGACCACCACAGAAATGATGACGACAGCAGCGGCCGA TATGACGACAACCAAAATGATGACGACACCAGAGACAAACGTAACGACCA CAGAAANNN

Coding sequence (CDS) from alignment at Sc0000007:5473330..5489138+

>transcript:BL96857_cuf0 ID=transcript:BL96857_cuf0|Name=transcript:BL96857_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=4509bp|location=Sequence derived from alignment at Sc0000007:5473330..5489138+ (Branchiostoma lanceolatum)
ATGTCGGCGAGACGCTGGGACAAACTACTTGCACTAGGAACTCTCCTCCT
TTGCTTACAACACTCCGTCTCACAGAACACCACAACCCAAGCCACAACAG
ATGCAGCGGGGACGACAAATGGCATCTCCATGGCGACGACCATGTCCATC
ACGCCACTCAGCACGACAGAGCAGGCCTCGTCGTCAACTCCAACCGCAGA
TAGCGTGACGTCGACAGGAAGTGTGACAAACGTCAACAACATGACGTCAG
ACACGACGAACACAACAAATGAGATGACGTCACCAATGAGCCACGATGTG
ACGACAGCCGTGATAACAACAGCGCCTCTGCTGACCACCACCATACTGCT
GACACCATCAAATCCCACACAGGCAGATTCCAACGTTACAACAATGGCCA
CGGGTACTACGTCACAGAATTCAAACACAACAGAGAACGTCACCATGTCA
ACAACCACGCGCACTCAGACAGACGGCACAGCTGCAGGTTCAAATATGAC
AGCGTCCAATACCATGGCAACAACGTTGATGACCACACCAGATAACACCA
CACCAACGGTACATTCCAATATGTCAACCCCTGGGAACGAGGCGGGTGTC
ATGACAACTACTGATGCCATTGAAACGTCACCTAGTCTCGTCAACATGAC
GTCAACAGAAATGATGCTGTCTACCATACAACCTACAACCACTACATCAT
CCACTACGGAGAACGCAACCATGGAAATGATGACGAATTTGACGACAACG
CAAATGTCGACGTCATCGTCCGAAATGATGACGACGACGCAAGCCTCCAA
TGATACAGACATGACATCGACAGCATCGACAGAAATGGCTTTAACAACAG
AGGATTCTACAGCAAGAATGCCAGTGATTAATGCAACTGAAGCCTTCAAC
ACATCTGCAGGTACAAACATGACTACACCAGAGGTGGTGGCAACAACAGA
GTTGATGACCTCAACACCGGGCAGTGTAAATACCACAGATATGATGACCA
ATATGACTACCACCGAAATGATGACCAACATGACAACCGCAGAAATGATG
GCCAACATGACTACCACAGAAGTGACAACCAACATGAACACCCCAGAAGT
GATGACCAACATGACTACCACAGAAATGATGACCCACATGACTACCACAG
AAGTGATGACCAACATGACATCCACAGAATTGCTGACCAACATGACCACC
ACAGAAATGATGACCAATATGACTACCACAGAAATGATGACCAACATGAC
CACCCCAGAAATGATGACCAACATGACTACGACAGAAATGATGACCAACA
TGACCACCACAGAAATGATGACCAACATGACTACCACAGAAATGATGACC
AACATGACCACCACAGAATTGATGACCAACATGACTACCACAGAAATGAT
GACCAACATGACCACCACAGAAATGATGACGACAGCAGCGGCCGATATGA
CGACAACCAAAATGATGACGACACCAGAGACAAACGTAACGACCACAGAA
ANNATGTCGGCGAGACGCTGGGACAAACTACTTGCACTAGGAACTCTCCT
CCTTTGCTTACAACACTCCGTCTCACAGAACACCACAACCCAAGCCACAA
CAGATGCAGCGGGGACGACAAATGGCATCTCCATGGCGACGACCATGTCC
ATCACGCCACTCAGCACGACAGAGCAGGCCTCGTCGTCAACTCCAACCGC
AGATAGCGTGACGTCGACAGGAAGTGTGACAAACGTCAACAACATGACGT
CAGACACGACGAACACAACAAATGAGATGACGTCACCAATGAGCCACGAT
GTGACGACAGCCGTGATAACAACAGCGCCTCTGCTGACCACCACCATACT
GCTGACACCATCAAATCCCACACAGGCAGATTCCAACGTTACAACAATGG
CCACGGGTACTACGTCACAGAATTCAAACACAACAGAGAACGTCACCATG
TCAACAACCACGCGCACTCAGACAGACGGCACAGCTGCAGGTTCAAATAT
GACAGCGTCCAATACCATGGCAACAACGTTGATGACCACACCAGATAACA
CCACACCAACGGTACATTCCAATATGTCAACCCCTGGGAACGAGGCGGGT
GTCATGACAACTACTGATGCCATTGAAACGTCACCTAGTCTCGTCAACAT
GACGTCAACAGAAATGATGCTGTCTACCATACAACCTACAACCACTACAT
CATCCACTACGGAGAACGCAACCATGGAAATGATGACGAATTTGACGACA
ACGCAAATGTCGACGTCATCGTCCGAAATGATGACGACGACGCAAGCCTC
CAATGATACAGACATGACATCGACAGCATCGACAGAAATGGCTTTAACAA
CAGAGGATTCTACAGCAAGAATGCCAGTGATTAATGCAACTGAAGCCTTC
AACACATCTGCAGGTACAAACATGACTACACCAGAGGTGGTGGCAACAAC
AGAGTTGATGACCTCAACACCGGGCAGTGTAAATACCACAGATATGATGA
CCAATATGACTACCACCGAAATGATGACCAACATGACAACCGCAGAAATG
ATGGCCAACATGACTACCACAGAAGTGACAACCAACATGAACACCCCAGA
AGTGATGACCAACATGACTACCACAGAAATGATGACCCACATGACTACCA
CAGAAGTGATGACCAACATGACATCCACAGAATTGCTGACCAACATGACC
ACCACAGAAATGATGACCAATATGACTACCACAGAAATGATGACCAACAT
GACCACCCCAGAAATGATGACCAACATGACTACGACAGAAATGATGACCA
ACATGACCACCACAGAAATGATGACCAACATGACTACCACAGAAATGATG
ACCAACATGACCACCACAGAATTGATGACCAACATGACTACCACAGAAAT
GATGACCAACATGACCACCACAGAAATGATGACGACAGCAGCGGCCGATA
TGACGACAACCAAAATGATGACGACACCAGAGACAAACGTAACGACCACA
GAAANNATGTCGGCGAGACGCTGGGACAAACTACTTGCACTAGGAACTCT
CCTCCTTTGCTTACAACACTCCGTCTCACAGAACACCACAACCCAAGCCA
CAACAGATGCAGCGGGGACGACAAATGGCATCTCCATGGCGACGACCATG
TCCATCACGCCACTCAGCACGACAGAGCAGGCCTCGTCGTCAACTCCAAC
CGCAGATAGCGTGACGTCGACAGGAAGTGTGACAAACGTCAACAACATGA
CGTCAGACACGACGAACACAACAAATGAGATGACGTCACCAATGAGCCAC
GATGTGACGACAGCCGTGATAACAACAGCGCCTCTGCTGACCACCACCAT
ACTGCTGACACCATCAAATCCCACACAGGCAGATTCCAACGTTACAACAA
TGGCCACGGGTACTACGTCACAGAATTCAAACACAACAGAGAACGTCACC
ATGTCAACAACCACGCGCACTCAGACAGACGGCACAGCTGCAGGTTCAAA
TATGACAGCGTCCAATACCATGGCAACAACGTTGATGACCACACCAGATA
ACACCACACCAACGGTACATTCCAATATGTCAACCCCTGGGAACGAGGCG
GGTGTCATGACAACTACTGATGCCATTGAAACGTCACCTAGTCTCGTCAA
CATGACGTCAACAGAAATGATGCTGTCTACCATACAACCTACAACCACTA
CATCATCCACTACGGAGAACGCAACCATGGAAATGATGACGAATTTGACG
ACAACGCAAATGTCGACGTCATCGTCCGAAATGATGACGACGACGCAAGC
CTCCAATGATACAGACATGACATCGACAGCATCGACAGAAATGGCTTTAA
CAACAGAGGATTCTACAGCAAGAATGCCAGTGATTAATGCAACTGAAGCC
TTCAACACATCTGCAGGTACAAACATGACTACACCAGAGGTGGTGGCAAC
AACAGAGTTGATGACCTCAACACCGGGCAGTGTAAATACCACAGATATGA
TGACCAATATGACTACCACCGAAATGATGACCAACATGACAACCGCAGAA
ATGATGGCCAACATGACTACCACAGAAGTGACAACCAACATGAACACCCC
AGAAGTGATGACCAACATGACTACCACAGAAATGATGACCCACATGACTA
CCACAGAAGTGATGACCAACATGACATCCACAGAATTGCTGACCAACATG
ACCACCACAGAAATGATGACCAATATGACTACCACAGAAATGATGACCAA
CATGACCACCCCAGAAATGATGACCAACATGACTACGACAGAAATGATGA
CCAACATGACCACCACAGAAATGATGACCAACATGACTACCACAGAAATG
ATGACCAACATGACCACCACAGAATTGATGACCAACATGACTACCACAGA
AATGATGACCAACATGACCACCACAGAAATGATGACGACAGCAGCGGCCG
ATATGACGACAACCAAAATGATGACGACACCAGAGACAAACGTAACGACC
ACAGAAANN
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96857gene:BL96857Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96857_cuf0transcript:BL96857_cuf0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96857_cuf0-E1BL96857_cuf0-E1-1564476830-78423Branchiostoma lanceolatumexon
BL96857_cuf0-E2BL96857_cuf0-E2-1564476830-78425Branchiostoma lanceolatumexon
BL96857_cuf0-E3BL96857_cuf0-E3-1564476830-78428Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000007genomeSc0000007:5473330..5489138 +
Properties
Property NameValue
Transcript idBL96857_cuf0
Biotypeprotein_coding