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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96751_cuf5 >transcript:BL96751_cuf5-protein ID=transcript:BL96751_cuf5-protein|Name=transcript:BL96751_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=153bp
MISQDASIRKGTKLYLLDRLTSLRFSSAEREIVRDIKEKLCYVALDFEQE
MMTAATSSSLEKSYELPDGQVITIGNERFRAPEALFQPSFLGMESTGIHE
TTYNCIMKCDIDIRKDLYANNVLSGGTTMXTTMFPGIGDRMQKEMVLSWL
PAP Run BLAST on NCBI mRNA from alignment at Sc0000222:373182..374934+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96751_cuf5 ID=transcript:BL96751_cuf5|Name=transcript:BL96751_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=1753bp|location=Sequence derived from alignment at Sc0000222:373182..374934+ (Branchiostoma lanceolatum)
GATAACTTTTATTTGAAAATTCATGCCCGTAGTCTATTTGCAAGGATGCG
AACAGTAGAAAATGTAACAAGGTTAGCAAGTGTATATTCTATGCATTTGA
TAACTAATATTTCTACATAAAACATTACTGAGATATATACAAGAGAGGGA
GCAAATCTATTATGACGCTTCTTGGTTTCGAGTTCGTCCTATTGATATTT
TCCTGTCAATATAAATCTTGTTGTGTCTTGTATGATCTCACAAGATGCGT
CTATAAGGAAAGGAACAAAACTCTACTTGTTGGATCGTTTAACATCACTA
CGTTTTTCCTCAGCCGAGCGTGAGATCGTCCGTGACATCAAGGAGAAGCT
GTGTTACGTCGCCCTGGACTTTGAACAGGAGATGATGACTGCGGCCACCA
GCTCCAGTCTGGAGAAGAGCTACGAGCTGCCTGATGGACAGGTCATCACC
ATTGGCAACGAGAGGTTCAGGGCACCGGAGGCCTTGTTCCAGCCTTCCTT
CCTCGGTATGTCTCTAGCAACTACAAATTCTTTGAAAACTGACTGTAGTT
TTCTTTTTACCGTACATCGCCGATATGGTAAGTGCTTCGGTGATTAAATA
TTTGATTTCTAATGGTAAACATAACGATTATTCCAGTTCACTTCATATCT
TTTCTTACAATGCCTGTCTTTCCAGGTATGGAGTCGACGGGAATCCACGA
GACCACCTATAACTGCATCATGAAGTGCGACATCGACATCCGTAAGGACC
TGTACGCCAACAACGTCCTGTCCGGTGGCACCACCATGTANACCACCATG
TTCCCTGGCATCGGTGACCGTATGCAGAAGGAGATGGTNCTTTCCTGGCT
CCCAGCACCATGAAGATCAAGATCATCGCTCCCCCCGAGAGGAAGTACTC
CGTGTGGATCGGTGGGTCCATCCTGGCCTCCCTGTCCACCTTCCAAGCCA
TGTGGATCACCAAGCAGGAGTACGACGAGTCCGGACCGTCCATCGTGCAC
AGGAAATGCTTCTAGATACAAAACACGAACCATATATTTGACAAAAACTT
CAATTTGATTGCTACTATAGACAAGTTACATGTAAGTGGACAGGTTACAA
CGTGATGTAAAATCATGACAGCTATACAAGATGAGTTCGGAAAATGGGAA
TCGTACAATGGGAAATGGAATGCATAAAAACACTATTGGGCAGTATGGGC
AGGATGGGCGACTGGACTGGTATAGTCGTGTATAGTAGCACTTGATTTGG
AGTTTCTGATTCCGATTATTGCCTGATAAATCATAATTGCTGGCTTCTTG
TCGCCAATTCTAAAAAGAAGGTAATGATGTACATTGCCTTATTTCCAATT
TGTACATACGCACAAATCTCAAGTCTCTAAGTAAAAACTCAAGAATTTGG
AATAAAGATATCAATGCCAATGGGAATATGCGGAGTCTGTGTTTGATTGA
TTGATTGATTGATTGATTGATTGATTGATTAAACCTTTCCCTTCCCGATT
TGTTCTTGCAGTCTTCAACTGCCTTATTCCAAGTCATTTACCCACATCAC
ACTCGATAGACTATGTTTGCAGGATGATCATTGTGAATAAAGATTCCAAG
ACTTTCTAATGACCTGTACATGTGTTTTCTCTTGAATATTCACTGTCAAA
TACAGTAGTCCTTGATAACATTATTACTTACAAGTTACAGCCTAGGCATG
TTGATGTTTACAGCAGGAAGGTCTACTTTGATGTGGTTTCAGGAAGTCAG
CGG Coding sequence (CDS) from alignment at Sc0000222:373182..374934+ >transcript:BL96751_cuf5 ID=transcript:BL96751_cuf5|Name=transcript:BL96751_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=924bp|location=Sequence derived from alignment at Sc0000222:373182..374934+ (Branchiostoma lanceolatum)
ATGATCTCACAAGATGCGTCTATAAGGAAAGGAACAAAACTCTACTTGTT
GGATCGTTTAACATCACTACGTTTTTCCTCAGCCGAGCGTGAGATCGTCC
GTGACATCAAGGAGAAGCTGTGTTACGTCGCCCTGGACTTTGAACAGGAG
ATGATGACTGCGGCCACCAGCTCCAGTCTGGAGAAGAGCTACGAGCTGCC
TGATGGACAGGTCATCACCATTGGCAACGAGAGGTTCAGGGCACCGGAGG
CCTTGTTCCAGCCTTCCTTCCTCGGTATGGAGTCGACGGGAATCCACGAG
ACCACCTATAACTGCATCATGAAGTGCGACATCGACATCCGTAAGGACCT
GTACGCCAACAACGTCCTGTCCGGTGGCACCACCATGTANACCACCATGT
TCCCTGGCATCGGTGACCGTATGCAGAAGGAGATGGTNCTTTCCTGGCTC
CCAGCACCATGAATGATCTCACAAGATGCGTCTATAAGGAAAGGAACAAA
ACTCTACTTGTTGGATCGTTTAACATCACTACGTTTTTCCTCAGCCGAGC
GTGAGATCGTCCGTGACATCAAGGAGAAGCTGTGTTACGTCGCCCTGGAC
TTTGAACAGGAGATGATGACTGCGGCCACCAGCTCCAGTCTGGAGAAGAG
CTACGAGCTGCCTGATGGACAGGTCATCACCATTGGCAACGAGAGGTTCA
GGGCACCGGAGGCCTTGTTCCAGCCTTCCTTCCTCGGTATGGAGTCGACG
GGAATCCACGAGACCACCTATAACTGCATCATGAAGTGCGACATCGACAT
CCGTAAGGACCTGTACGCCAACAACGTCCTGTCCGGTGGCACCACCATGT
ANACCACCATGTTCCCTGGCATCGGTGACCGTATGCAGAAGGAGATGGTN
CTTTCCTGGCTCCCAGCACCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000222 | genome | Sc0000222:373182..374934 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96751_cuf5 |
| Biotype | protein_coding |
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