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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96744_cuf6 >transcript:BL96744_cuf6-protein ID=transcript:BL96744_cuf6-protein|Name=transcript:BL96744_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=140bp
MYNKGYYCIDNMKIAGLSQFYLTVAGADIDFEMLYTTGTALYCASYEGHV
DMVRLLLRKGASVARRCGPHAPLHAAASNGWTEVVELLVNHGATLDIRDD
LEHTPLMRACVYKQVDTVRRLIELGARADLTDDYCQVAQM Run BLAST on NCBI mRNA from alignment at Sc0000068:72407..74703+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96744_cuf6 ID=transcript:BL96744_cuf6|Name=transcript:BL96744_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=2297bp|location=Sequence derived from alignment at Sc0000068:72407..74703+ (Branchiostoma lanceolatum)
GAAGAAGCCGAACCTATGAATTAGAGTAATTATAGATCCATTGTTCTAGA
TTAGTATTATATACATATATATTAGAAGTCCTGTCAGTGTCATCATATGA
TCATGTAACGTTATTTTGTATCTATATGCCTGTACTTAGCCCGTGATAGG
GCATGAATGTACAATAAAGGTTATTATTGTATCGACAATATGAAAATTGC
TGGTTTAAGTCAGTTTTACTTAACTGTTGCAGGTGCAGACATTGACTTCG
AGATGTTATACACCACCGGCACAGCACTGTACTGTGCTTCCTACGAGGGG
CATGTAGACATGGTGAGGCTGCTGCTCCGCAAGGGGGCGTCTGTGGCGAG
ACGATGCGGTCCGCATGCTCCTCTTCATGCCGCAGCGTCCAACGGTAGGT
CGAATGAAGCAACTGCTTATATATAACGTTAGCAATGAGGGTAGATATAT
CTAACTTGATTGTATATAGTCACGTTGTCTCTCTGTGTTTACATTGCATA
TAATGACTTCAACCAAGGAGGCTATAGACTGTCTATAACCACCTTGCTTC
GTTGAAGGTCACATTCTATATCATAGTCAAGTTGATATATATTTCGTGTG
TCGCACAGGGTGGACGGAAGTGGTGGAGTTGCTGGTGAATCATGGTGCAA
CATTAGACATCCGGGACGACTTGGAGCACACGCCACTCATGAGAGCCTGC
GTCTATAAACAAGTGGACACAGTTCGGCGACTGATTGAGCTGGGAGCAAG
AGCGGATTTAACCGACGATTATTGCCAGGTGGCCCAAATGTAAGTGTCAC
GTCGTTTGAGCATCATGATGCAATGAATTATTGTTTTTTAATGTAGATAA
ACTTTTGTCGTCAGCTTGTGTTCATTTTTTCAATGTGTGTGTATGTGTGT
TATGTTTTATACTATGTTTTATACTATTCTGGTCCATAGGCAAAAACCCA
GATGTTACAAAAATATCAGAATCTGACACCATGCATATGCATTCTAGAGG
AAGCATAATCTATATACATCTTTATGTATGCATGTATTGATATACCGTTA
CCCAGTTAGTTCCCTAAACGAGTCGTATTTTCCACTAGGTTGGGGGTTGA
AGTCGGATGCCGTCATTGGGAAGAGTGTTTGAAGCTGATACAAGAGGCGA
GGAAGACCCAGCTGTTGAGATGCTGCAACCCAAAGTGTGGGAAACCAGGC
TACAGGTGGGTTTTGCTGGTGTTGGTCCGTTAAAATGTTTTATTTCCACA
TTATCATCCAATGACTTGTATGAGCAAATGTTGCTATTGACCCAGGAAAA
TTAGCCACGGAGGAGGTAAGGCCACACAGTTGATTACATGGATTACACGT
GCGCATCAATATTTGTCATCCATAAAATAATTCAGTATGGTTGAAAGGAG
AGAGAGAGCGGTAACTACGGAGGACGGTACCCAGGCTACATAGAAATTTT
GTTTCCATCTGAATTTTTAAAAGTCTTCGTAGTCTTCAAGTCCTACAAAA
TGCAGTTGGAAATCTTGAATTCTACACAGTTTCTGAGTAACTTGTGTATC
TGTCACACCGTCTGCAGGAAAACCGGTACACTGAAGCTATGTGGCCGGTG
TCGGATGACCAGGTATTGCAGCCGGGACTGTCAGAAACAACACTGGTCTG
TCGGACACAAGAAGTGCTGTGGACATGATGTATACTCCGGGGACCCAGTC
GCCTTCCGGGAAAGGGTTTTGTCAATGGCAAAAATCCTCGAACAATATGA
GGACCAAGCATGACTCTAAACATTTTACCACTTGTTGCATCTTTTAACGG
CGGGGTGTATCATTCCGTACGAAGTACTGTTGAGATCACAATGTCGCTAC
AGCCATATCAAATGTAGTAGAAGATAACTGACATGGTGCAGAATCATTTT
TCATTTTGCATATGGATTTGACGCTGTTCTCTTTATGAGTACATAATAAT
GTGCAAATTTTACCCACGTATTCTGTTCTAAGGGTTTGTATGGCCATGTT
TGATTTATCTTGTAAAAGAAAGTAAATCAGTTATAACATGGGAGTCGGAT
TTTTACAAAGCAACTTTTACAGTTTCCACATTTTCTTTCATTTACCTAGT
ATGTTGTTGGTAGACTGTCACAGAACATTGCCACGATTAGGTATTGTATT
CTCACTGAATCGTGTTTCATCGAATAAAGATAGCTTTCTACTGAACTTTT
CTATTGGTTGTTGTGATGTGAATATTATAAGCTGGTGAAGTGTTTAGCCA
TGTGCTATCATCCCGAGTGAATCACACAATAGGTAACAATCTCCCCG Coding sequence (CDS) from alignment at Sc0000068:72407..74703+ >transcript:BL96744_cuf6 ID=transcript:BL96744_cuf6|Name=transcript:BL96744_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=846bp|location=Sequence derived from alignment at Sc0000068:72407..74703+ (Branchiostoma lanceolatum)
ATGTACAATAAAGGTTATTATTGTATCGACAATATGAAAATTGCTGGTTT
AAGTCAGTTTTACTTAACTGTTGCAGGTGCAGACATTGACTTCGAGATGT
TATACACCACCGGCACAGCACTGTACTGTGCTTCCTACGAGGGGCATGTA
GACATGGTGAGGCTGCTGCTCCGCAAGGGGGCGTCTGTGGCGAGACGATG
CGGTCCGCATGCTCCTCTTCATGCCGCAGCGTCCAACGGGTGGACGGAAG
TGGTGGAGTTGCTGGTGAATCATGGTGCAACATTAGACATCCGGGACGAC
TTGGAGCACACGCCACTCATGAGAGCCTGCGTCTATAAACAAGTGGACAC
AGTTCGGCGACTGATTGAGCTGGGAGCAAGAGCGGATTTAACCGACGATT
ATTGCCAGGTGGCCCAAATGTAAATGTACAATAAAGGTTATTATTGTATC
GACAATATGAAAATTGCTGGTTTAAGTCAGTTTTACTTAACTGTTGCAGG
TGCAGACATTGACTTCGAGATGTTATACACCACCGGCACAGCACTGTACT
GTGCTTCCTACGAGGGGCATGTAGACATGGTGAGGCTGCTGCTCCGCAAG
GGGGCGTCTGTGGCGAGACGATGCGGTCCGCATGCTCCTCTTCATGCCGC
AGCGTCCAACGGGTGGACGGAAGTGGTGGAGTTGCTGGTGAATCATGGTG
CAACATTAGACATCCGGGACGACTTGGAGCACACGCCACTCATGAGAGCC
TGCGTCTATAAACAAGTGGACACAGTTCGGCGACTGATTGAGCTGGGAGC
AAGAGCGGATTTAACCGACGATTATTGCCAGGTGGCCCAAATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000068 | genome | Sc0000068:72407..74703 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96744_cuf6 |
| Biotype | protein_coding |
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