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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96743_cuf1 >transcript:BL96743_cuf1-protein ID=transcript:BL96743_cuf1-protein|Name=transcript:BL96743_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=124bp
MTSPNAGADIDYKQPDSEVASVGPALHIASLTGDVDMARLLLRKGASLVK
RHDSSSSLHAAAFKGNTEMVEFLVQHGATLDIRDGYQNTPLMIACGSKCV
DTVRRLIELGARPDWPDDHYLAKG Run BLAST on NCBI mRNA from alignment at Sc0000068:64613..66243+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96743_cuf1 ID=transcript:BL96743_cuf1|Name=transcript:BL96743_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1631bp|location=Sequence derived from alignment at Sc0000068:64613..66243+ (Branchiostoma lanceolatum)
CTTCCGCTCAAGTATCCCGCCAAGCCGCCCACCGGCACGGTAAAATAGAC
AGGCATCTGTGCACAGTACGTGTGTAGTTTTCTCCAGGCCTTGTTTTCTG
GTACCGTACAATGTATTTGCAGTTACGTTCATTTAAGAAAGTGCTCTTTT
GTTTTACAACAATTTTAGTTTACAGCAGAAATGTAGTCAAACTTCGACTC
TCTCACAGTTGACTACTGTTAATGCAGAAATGTTCGCGGTGGTCTTATGT
TCGCGGTTTTCGCGGCGACCGTTTCACCGCGAACTTAAAACCACCGCGAA
TATTTTTTCTGATATTGTAGCACTGCCGCAAACTAAAAACCACCGCGAAC
ACTCCCATTTTGCCCTAGCGCGAAATAAAAACCACGCGAACTTAGATGTA
TCTACAGTATTTGAAATCGGAGACTCGAATAAACAGGTCTTGACTCTGGG
GTGTACCGATGCAGAGTGCTCTTTACTAAAACCAGATGTTAGTTGTAGTG
GCCGAAAGGGGTTGTACATTATATATATTGGAATCATGTCACTACACAAC
GCGTTTATAAAATCATATCAACGTCATGACATCACCAAATGCAGGTGCAG
ACATTGACTACAAACAGCCCGACAGCGAGGTGGCCAGCGTCGGTCCAGCA
TTGCACATCGCTTCTCTCACAGGGGATGTGGACATGGCAAGACTGCTGCT
CCGCAAGGGGGCGTCTTTGGTGAAAAGACATGATTCATCATCTTCCCTTC
ATGCAGCAGCGTTCAAAGGTAGGTCAATTCAAAACAAATCCTTGTCTGTT
ACTGTCACTGTTACTGTTAGACTAAAAAAAACGCCACTCTAGAAGCTAGC
TATGATAAAGTAGTTCACCTCTTGTTTTGTGTTTTGAACCTTTGTTTATC
CATGAGAAGCTCAAGTCGACGTGCAAGCCGTGACTTTTCATTGAGGTCAT
GCGGGAAGAGGTAGGGGTCAGATGAAATATAACAGAGATACAAATTAAAT
CATTTAAGTCCTAATAACTCTTTCTACACCTGTATTGTAACAGACAGAAA
CGCTTTACTAAATTACATGTCCTTACATTGCACGTTACGTCGTGGAAGAC
AACGTTTACTTGATATGTGTTTATTGTACCGTAAATGTCACCTAGGGAAT
ACAGAAATGGTGGAGTTCCTGGTGCAACACGGTGCAACTCTAGACATACG
GGACGGCTACCAGAACACGCCACTCATGATCGCATGTGGCAGCAAATGTG
TGGACACAGTTCGGCGACTGATTGAGCTTGGAGCGAGACCTGATTGGCCC
GACGACCATTACTTAGCCAAGGGGTAAGTGTCACATCCTTACATCAGAAC
ATATTTAGTTATTCATCAGAATATTGAATCAACCCGTCTATGAAGGCATA
GCCTTAAGCGTCAAACCTCTGCACGTAAAAGAACCAAACACACTTATTGA
GAAGAGTAGGATTGACCCAGTGTGCTTGGCCATTCGCCAAAAACGCGAGC
CGTGGCGAAGCCGCATTGCACTACCACTAGCTACTTGGAAAAGCATCATG
CTTCACCTCAATTGAGGATGCCTTGGAACGAAACGAAAAAATAGAATCAA
TGATTAACGGTCCGATTGAAGTTGAAGTCAG Coding sequence (CDS) from alignment at Sc0000068:64613..66243+ >transcript:BL96743_cuf1 ID=transcript:BL96743_cuf1|Name=transcript:BL96743_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=750bp|location=Sequence derived from alignment at Sc0000068:64613..66243+ (Branchiostoma lanceolatum)
ATGACATCACCAAATGCAGGTGCAGACATTGACTACAAACAGCCCGACAG
CGAGGTGGCCAGCGTCGGTCCAGCATTGCACATCGCTTCTCTCACAGGGG
ATGTGGACATGGCAAGACTGCTGCTCCGCAAGGGGGCGTCTTTGGTGAAA
AGACATGATTCATCATCTTCCCTTCATGCAGCAGCGTTCAAAGGGAATAC
AGAAATGGTGGAGTTCCTGGTGCAACACGGTGCAACTCTAGACATACGGG
ACGGCTACCAGAACACGCCACTCATGATCGCATGTGGCAGCAAATGTGTG
GACACAGTTCGGCGACTGATTGAGCTTGGAGCGAGACCTGATTGGCCCGA
CGACCATTACTTAGCCAAGGGGTAAATGACATCACCAAATGCAGGTGCAG
ACATTGACTACAAACAGCCCGACAGCGAGGTGGCCAGCGTCGGTCCAGCA
TTGCACATCGCTTCTCTCACAGGGGATGTGGACATGGCAAGACTGCTGCT
CCGCAAGGGGGCGTCTTTGGTGAAAAGACATGATTCATCATCTTCCCTTC
ATGCAGCAGCGTTCAAAGGGAATACAGAAATGGTGGAGTTCCTGGTGCAA
CACGGTGCAACTCTAGACATACGGGACGGCTACCAGAACACGCCACTCAT
GATCGCATGTGGCAGCAAATGTGTGGACACAGTTCGGCGACTGATTGAGC
TTGGAGCGAGACCTGATTGGCCCGACGACCATTACTTAGCCAAGGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000068 | genome | Sc0000068:64613..66243 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96743_cuf1 |
| Biotype | protein_coding |
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