transcript:BL96713_cuf7 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96713_cuf7
Unique Nametranscript:BL96713_cuf7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96713_cuf7

>transcript:BL96713_cuf7-protein ID=transcript:BL96713_cuf7-protein|Name=transcript:BL96713_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=143bp
TGNDHLHRLTAQDVYELRVDLEDFEGNTAFAKYNIFRVGDEVHKYRLTVS
GYSGTAGDGLTDPIHTHDGTYFSTRDGENDNHSTVHCAQAYKGGWWYNRC
HHVCLNGLYLGGVHQSSWEGVNWYPWKGLNYSLKTAEMKIRTN
Run BLAST on NCBI

mRNA from alignment at Sc0000027:2174853..2175583+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96713_cuf7 ID=transcript:BL96713_cuf7|Name=transcript:BL96713_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=731bp|location=Sequence derived from alignment at Sc0000027:2174853..2175583+ (Branchiostoma lanceolatum)
TCACAGGTAATGACCACCTCCACCGCCTGACTGCCCAGGATGTGTACGAA
CTGAGGGTGGATCTGGAGGACTTTGAGGGCAACACGGCCTTCGCCAAGTA
CAACATCTTCAGGGTGGGGGATGAGGTGCACAAGTATAGGCTCACTGTCA
GTGGCTACTCGGGCACTGCGGGTGTGTGTCCTCCTTATAGCACTTTTCTG
TGAAAAATGATCACTTTTGAATTGTATGTTGACAAATATATCTACTGGCA
TTTTAAAAGAGTAACTGATTGTATAAAATTACATGCACTACCTTTAGCTA
TAACCGAGAACTCTATATGTCAAACGAACTACTTAACAAAGAAGAGAACA
CAGTGTTACGTTATATGTCGACCCTTTTCAGGTGATGGCCTGACCGATCC
CATACACACTCACGACGGCACGTACTTTTCTACAAGAGACGGGGAGAATG
ACAACCACTCTACCGTACACTGTGCTCAAGCTTACAAAGGTGGATGGTGG
TACAATCGTTGCCACCATGTATGCCTCAACGGCCTGTACCTGGGTGGGGT
TCACCAGTCTTCATGGGAAGGGGTCAACTGGTACCCATGGAAGGGTCTAA
ACTACTCCCTGAAAACTGCTGAAATGAAAATAAGAACAAATTAGGTTGAC
ATTGGTTGCTCATCATGGCTGTCCAGGTCCTCACAGACAACAACATATCA
ATACACAGAGAAATAAAACACCATATGCATG

Coding sequence (CDS) from alignment at Sc0000027:2174853..2175583+

>transcript:BL96713_cuf7 ID=transcript:BL96713_cuf7|Name=transcript:BL96713_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=864bp|location=Sequence derived from alignment at Sc0000027:2174853..2175583+ (Branchiostoma lanceolatum)
ACAGGTAATGACCACCTCCACCGCCTGACTGCCCAGGATGTGTACGAACT
GAGGGTGGATCTGGAGGACTTTGAGGGCAACACGGCCTTCGCCAAGTACA
ACATCTTCAGGGTGGGGGATGAGGTGCACAAGTATAGGCTCACTGTCAGT
GGCTACTCGGGCACTGCGGGTGATGGCCTGACCGATCCCATACACACTCA
CGACGGCACGTACTTTTCTACAAGAGACGGGGAGAATGACAACCACTCTA
CCGTACACTGTGCTCAAGCTTACAAAGGTGGATGGTGGTACAATCGTTGC
CACCATGTATGCCTCAACGGCCTGTACCTGGGTGGGGTTCACCAGTCTTC
ATGGGAAGGGGTCAACTGGTACCCATGGAAGGGTCTAAACTACTCCCTGA
AAACTGCTGAAATGAAAATAAGAACAAATTAGACAGGTAATGACCACCTC
CACCGCCTGACTGCCCAGGATGTGTACGAACTGAGGGTGGATCTGGAGGA
CTTTGAGGGCAACACGGCCTTCGCCAAGTACAACATCTTCAGGGTGGGGG
ATGAGGTGCACAAGTATAGGCTCACTGTCAGTGGCTACTCGGGCACTGCG
GGTGATGGCCTGACCGATCCCATACACACTCACGACGGCACGTACTTTTC
TACAAGAGACGGGGAGAATGACAACCACTCTACCGTACACTGTGCTCAAG
CTTACAAAGGTGGATGGTGGTACAATCGTTGCCACCATGTATGCCTCAAC
GGCCTGTACCTGGGTGGGGTTCACCAGTCTTCATGGGAAGGGGTCAACTG
GTACCCATGGAAGGGTCTAAACTACTCCCTGAAAACTGCTGAAATGAAAA
TAAGAACAAATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96713gene:BL96713Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96713_cuf7-E1BL96713_cuf7-E1-1564476830-168353Branchiostoma lanceolatumexon
BL96713_cuf7-E2BL96713_cuf7-E2-1564476830-168356Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96713_cuf7transcript:BL96713_cuf7-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000027genomeSc0000027:2174853..2175583 +
Properties
Property NameValue
Transcript idBL96713_cuf7
Biotypeprotein_coding