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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96708_cuf2 >transcript:BL96708_cuf2-protein ID=transcript:BL96708_cuf2-protein|Name=transcript:BL96708_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=140bp
SDIESCGSNVCQNGGNCTSCFGESVFFCDCPDGFVGKYCEINIACASNPC
QNGGTCQDDANSYSCNCPPGYLGDNCESDVDWCALVTCPFDWTCQDDGTN
FTCLAGSTRLAEPYACSSASCPDGMYCKEEGPSSFSCRSV Run BLAST on NCBI mRNA from alignment at Sc0000016:1941435..1943139+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96708_cuf2 ID=transcript:BL96708_cuf2|Name=transcript:BL96708_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1705bp|location=Sequence derived from alignment at Sc0000016:1941435..1943139+ (Branchiostoma lanceolatum)
TTCAGATATCGAATCATGTGGATCAAACGTGTGCCAGAACGGCGGAAACT
GCACGTCCTGCTTCGGCGAGTCCGTCTTTTTCTGCGACTGTCCTGATGGG
TTCGTGGGAAAGTACTGCGAGATCAGTGAGTATATGAATCATCAATATAN
AAATTCTGCGAGATCAGTGAGTATTTGAATCATCAATATATTAGATATCC
ACTCAGTTCTGATGTACTTTCTGGGTTAACTGGTATCACTTTTGATAATG
CAATTGAAATCTTTTCATCTTTATGTTTCATATATATGACCATCATTAAT
AGGGAACATAGATGTTTAAAGTTTTGATCATTACAATTAATTTGCATTTT
CTCAAATGTCTCCCAAATATCTAAAAGTAACAAATCATTTCCATTGTTTT
TACAGACATCGCATGCGCCTCCAATCCTTGTCAGAACGGAGGAACCTGCC
AGGATGACGCCAACTCTTACAGTTGCAACTGTCCGCCTGGTTACCTCGGG
GACAATTGTGAATCAGGTGAAAACAATTGCTTTTTTCTACTTGTGTCGAA
TAAAATGTATGTTTTTTTGTTGTTTGGTTTGTTTGTTTTGTTCATTCGCA
CATATATAAACATCAATGGTGAAATAATTGTGTCTAAAAGAACGTACAGG
AGGAGAAAAGAAACCTGCATGGCTATCTAACTTAACAAATGTCAATTATG
GTACAAGTGTGGTATGATAAATAACTAGCAAAGGTATAACAAATGATGAC
AAGAACATAATGAACAAATATATAACGAGCAATAGATTACTGATAATATA
TTGCAGATTAATCATAAGAAATTATTATCAACGAAGACCAGAAATATTAC
AATTATACGTACTCACATAAAACGACAAAATGTTCTGTGTTATAATTTGT
GTTGGGGGTCAAACGTTCATATATTCACCGCCGAAGTGATAGAGTATACT
AAGTAGTATACGTTATGATGGTGACAAATCTGTAAAAACAAAAGCTCCCA
TAGATTGCCGACACGAGACGCGCTTTTGTGTTTGTTGTCTCTGTATCAGA
CGTAGACTGGTGTGCCCTCGTGACCTGCCCGTTTGACTGGACCTGCCAGG
ATGACGGAACCAACTTCACCTGCCTGGGTAAGTACATCACGTGGGCTTGC
ATTTCTAAAAATTACTTTGTTATGTTTTTTTTATATCAAGATGGATTGTG
GAAAATGCAAAGTGAATATGCATGAATCCTTTCCAATATTCTCTTTCTCA
AAGTTTCTGAAGCCGGCAGCACCAGGCTGGCGGAGCCCTATGCGTGCAGC
AGCGCCTCCTGTCCGGACGGCATGTACTGCAAGGAGGAGGGGCCGTCATC
TTTCTCCTGCAGATCCGTGTGACCTCCGTGGCCATCTTACCTGCAGAACG
TGTTCAGCACACAAGAAATAATGACAGGACGTTAAAAAGAATAAAAGACG
CACCAATGCCTACAATTTCTCAGTCATCTTTATCAGTCGTTTTAGCTTGG
AATTATATATAGAATTAACATTGAAATAACAGTTTTTCTCACCTGTGTGC
CCAGAAAGAGTAAAAGGAAAACATAAGAAATGGATAATGATTTCTGTGAT
ATCTGACTTTGGGACGCTATGTGCCACATAATAAGGTCAAAGGACAACTT
CACACAGTTCAGATGCAGAACTTCTAGATTTAGAAATACTACCTTACCTT
TTAGC Coding sequence (CDS) from alignment at Sc0000016:1941435..1943139+ >transcript:BL96708_cuf2 ID=transcript:BL96708_cuf2|Name=transcript:BL96708_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1692bp|location=Sequence derived from alignment at Sc0000016:1941435..1943139+ (Branchiostoma lanceolatum)
TCAGATATCGAATCATGTGGATCAAACGTGTGCCAGAACGGCGGAAACTG
CACGTCCTGCTTCGGCGAGTCCGTCTTTTTCTGCGACTGTCCTGATGGGT
TCGTGGGAAAGTACTGCGAGATCAACATCGCATGCGCCTCCAATCCTTGT
CAGAACGGAGGAACCTGCCAGGATGACGCCAACTCTTACAGTTGCAACTG
TCCGCCTGGTTACCTCGGGGACAATTGTGAATCAGACGTAGACTGGTGTG
CCCTCGTGACCTGCCCGTTTGACTGGACCTGCCAGGATGACGGAACCAAC
TTCACCTGCCTGGCCGGCAGCACCAGGCTGGCGGAGCCCTATGCGTGCAG
CAGCGCCTCCTGTCCGGACGGCATGTACTGCAAGGAGGAGGGGCCGTCAT
CTTTCTCCTGCAGATCCGTGTGATCAGATATCGAATCATGTGGATCAAAC
GTGTGCCAGAACGGCGGAAACTGCACGTCCTGCTTCGGCGAGTCCGTCTT
TTTCTGCGACTGTCCTGATGGGTTCGTGGGAAAGTACTGCGAGATCAACA
TCGCATGCGCCTCCAATCCTTGTCAGAACGGAGGAACCTGCCAGGATGAC
GCCAACTCTTACAGTTGCAACTGTCCGCCTGGTTACCTCGGGGACAATTG
TGAATCAGACGTAGACTGGTGTGCCCTCGTGACCTGCCCGTTTGACTGGA
CCTGCCAGGATGACGGAACCAACTTCACCTGCCTGGCCGGCAGCACCAGG
CTGGCGGAGCCCTATGCGTGCAGCAGCGCCTCCTGTCCGGACGGCATGTA
CTGCAAGGAGGAGGGGCCGTCATCTTTCTCCTGCAGATCCGTGTGATCAG
ATATCGAATCATGTGGATCAAACGTGTGCCAGAACGGCGGAAACTGCACG
TCCTGCTTCGGCGAGTCCGTCTTTTTCTGCGACTGTCCTGATGGGTTCGT
GGGAAAGTACTGCGAGATCAACATCGCATGCGCCTCCAATCCTTGTCAGA
ACGGAGGAACCTGCCAGGATGACGCCAACTCTTACAGTTGCAACTGTCCG
CCTGGTTACCTCGGGGACAATTGTGAATCAGACGTAGACTGGTGTGCCCT
CGTGACCTGCCCGTTTGACTGGACCTGCCAGGATGACGGAACCAACTTCA
CCTGCCTGGCCGGCAGCACCAGGCTGGCGGAGCCCTATGCGTGCAGCAGC
GCCTCCTGTCCGGACGGCATGTACTGCAAGGAGGAGGGGCCGTCATCTTT
CTCCTGCAGATCCGTGTGATCAGATATCGAATCATGTGGATCAAACGTGT
GCCAGAACGGCGGAAACTGCACGTCCTGCTTCGGCGAGTCCGTCTTTTTC
TGCGACTGTCCTGATGGGTTCGTGGGAAAGTACTGCGAGATCAACATCGC
ATGCGCCTCCAATCCTTGTCAGAACGGAGGAACCTGCCAGGATGACGCCA
ACTCTTACAGTTGCAACTGTCCGCCTGGTTACCTCGGGGACAATTGTGAA
TCAGACGTAGACTGGTGTGCCCTCGTGACCTGCCCGTTTGACTGGACCTG
CCAGGATGACGGAACCAACTTCACCTGCCTGGCCGGCAGCACCAGGCTGG
CGGAGCCCTATGCGTGCAGCAGCGCCTCCTGTCCGGACGGCATGTACTGC
AAGGAGGAGGGGCCGTCATCTTTCTCCTGCAGATCCGTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:1941435..1943139 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96708_cuf2 |
| Biotype | protein_coding |
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