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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96695_cuf1 >transcript:BL96695_cuf1-protein ID=transcript:BL96695_cuf1-protein|Name=transcript:BL96695_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=135bp
CGSNVCQNSGNCTSCFGESIFFCDCPDGFVGKFCEINIDECSSNPCQNGG
TCHDDVNSYRCRCLPGYVGDNCESDVDWCALVTCPFDWTCQDDGTHFTCL
APFVRMEETYQCSSAPCPEDMYCKEDRGSFSCWTD Run BLAST on NCBI mRNA from alignment at Sc0000016:1918570..1920688+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96695_cuf1 ID=transcript:BL96695_cuf1|Name=transcript:BL96695_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2119bp|location=Sequence derived from alignment at Sc0000016:1918570..1920688+ (Branchiostoma lanceolatum)
GTGTGGATCAAACGTCTGCCAGAACAGCGGAAACTGCACCTCCTGCTTCG
GCGAGTCCATCTTTTTCTGTGACTGTCCAGATGGGTTCGTGGGAAAGTTC
TGCGAGATCAGTAAGATTTAGTTCCACAATTGATCTACTTTCAGTTTTTA
AGCTCTTTCCACTGTATCTGGTAACGTTTCCAAAGCACAATGTACACAGA
TTTGTAGGTCTTGTAACTCTCAACTGAAACGGTCTGTCTGGAATTTTCAT
AGCTTTCATGCAGATCTTCATTATTGATAAAAGATGCAGATGTTTCAAGT
TGTGATAATTTTACGTTGTTTTTAAGCACTTTTCCAAACATCAACAAGGA
AGAAACATTAGTTCTATTTGCCTTTTAAGACATCGACGAATGCTCTTCGA
ACCCATGTCAAAATGGCGGAACCTGCCACGATGACGTCAACTCTTACCGA
TGCCGCTGCCTACCTGGTTACGTTGGGGACAATTGCGAATCAGGTAAATA
ATTTTATTTCTTCCCTGTATCGACCAATCTATTAACTCTCATCAATAGAC
AAAAACTTGAACATGTCAGCCTGTAAGGGACCTATAGCTAGATGACATGT
ATGTATTGCAAATCTTGTTGTAGTGACATTTTTCATATGCACCAAGGCTA
TGACGTCATAACTACCGCCAAATATTTACACTACGCTATTCTGTGTTAAC
CGTAAGTTTCATGTTGTTTCTGCCTCAGACGTGGACTGGTGTGCCCTCGT
GACCTGCCCGTTTGACTGGACCTGCCAGGATGACGGAACCCACTTCACCT
GCCTGGGTAGGTACATAACGTGGGCTGGCGTTTCTAATATAGTTCTAGCG
CGAAAATGGATTATGGATAAGGTCAGATGGCGTTTCCAGCAATAACCTTA
TATATCGTTGTTTCATCGCTATTATACATTTTTGATAAGGTCAGATGGTA
CTACCCCTCTGTGAATAAACATCCACACAAGTAACCATCATATTGTTGTT
AAAGTCCTTTTCGTCGTGTACTAATCGAAAACAGTCTCTGACGCGTCACA
AACCATGCCCGTCACAGACTGTGCTTTCCCAGGCACAGAACGTGACACAG
CCCGACCGTCACAGACTGTGCCCGGAAGTGCTGTCAATCACTGTGACTGA
CGGTATGGGATAAGACCCCCTGTGTGTCACGAACTGTGCTCGGTTGGGCA
CGATTCGTGACGGTGTCCGCGTGTCACAATCCGTGCTTTTGTCCCAGGCA
CGGTTTGTGACACGCGGGCACTGTCACAAACCGTGCCTGGGCACAGAACG
TGACAAAGCACTGAACGTGACGCGACAGTCCCTACCCGTTAAGGGAAGCT
CAAAGTATTAAGATGTAAAAAGTTTAAAGCAGGTGAAAAGAATGGGAAGC
TGGAAAGTCTTTGGGTAGCCCGTCATCTACCTTAGACCACAATGCATAAC
GGCTGAACATGAGCACTTTGGGTTATCATAATGTTTAGGTTGTACCATTG
AGAACTTAAATTTTTCTACGCATAGAAGATTGTTTCCTTTTTGGGTTGGA
TAATAAAAGAGGACATTGTTGTACAATTTGTTTCTTCACGTTTCATTCCA
GCGCCATTCGTTCGCATGGAGGAAACATACCAGTGCAGCAGCGCTCCCTG
CCCGGAAGACATGTACTGCAAGGAGGACCGTGGCTCGTTCTCATGCTGGA
CTGACTGACCGCTGACCGACCTGACTGGATATGCGTAGTCTTTGAAGCTT
CATAACTAAATAACCGCTCTATTGATTTATTGATTAATCTTCATCTAAAA
TGTTAGACTAAAAAGGTTTAACTCCCAACTAAAATTGAAACTTTCCGTTA
ATTGTTATTTAGCATGCATTTGTGTTGGGTTTTCCTCAATGGGCATGATT
CCACAAAATTCATGAATTTTGATGGATTTATCATTAAAATTAGATAACCA
TATGGATCTTTGTTTCTAATAGTATGTATAAATGATATGGATCAAAGCAT
TATGACAACATAAAAAATGAGAATATTGTTTTAAAGCTCGATGTCTCACG
CGAAGGCATTTCAGTAGCAATGCTGCTGTGCAAATCATCGAAATGGGACA
TATTGCAAAATAAACCTGC Coding sequence (CDS) from alignment at Sc0000016:1918570..1920688+ >transcript:BL96695_cuf1 ID=transcript:BL96695_cuf1|Name=transcript:BL96695_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1632bp|location=Sequence derived from alignment at Sc0000016:1918570..1920688+ (Branchiostoma lanceolatum)
TGTGGATCAAACGTCTGCCAGAACAGCGGAAACTGCACCTCCTGCTTCGG
CGAGTCCATCTTTTTCTGTGACTGTCCAGATGGGTTCGTGGGAAAGTTCT
GCGAGATCAACATCGACGAATGCTCTTCGAACCCATGTCAAAATGGCGGA
ACCTGCCACGATGACGTCAACTCTTACCGATGCCGCTGCCTACCTGGTTA
CGTTGGGGACAATTGCGAATCAGACGTGGACTGGTGTGCCCTCGTGACCT
GCCCGTTTGACTGGACCTGCCAGGATGACGGAACCCACTTCACCTGCCTG
GCGCCATTCGTTCGCATGGAGGAAACATACCAGTGCAGCAGCGCTCCCTG
CCCGGAAGACATGTACTGCAAGGAGGACCGTGGCTCGTTCTCATGCTGGA
CTGACTGATGTGGATCAAACGTCTGCCAGAACAGCGGAAACTGCACCTCC
TGCTTCGGCGAGTCCATCTTTTTCTGTGACTGTCCAGATGGGTTCGTGGG
AAAGTTCTGCGAGATCAACATCGACGAATGCTCTTCGAACCCATGTCAAA
ATGGCGGAACCTGCCACGATGACGTCAACTCTTACCGATGCCGCTGCCTA
CCTGGTTACGTTGGGGACAATTGCGAATCAGACGTGGACTGGTGTGCCCT
CGTGACCTGCCCGTTTGACTGGACCTGCCAGGATGACGGAACCCACTTCA
CCTGCCTGGCGCCATTCGTTCGCATGGAGGAAACATACCAGTGCAGCAGC
GCTCCCTGCCCGGAAGACATGTACTGCAAGGAGGACCGTGGCTCGTTCTC
ATGCTGGACTGACTGATGTGGATCAAACGTCTGCCAGAACAGCGGAAACT
GCACCTCCTGCTTCGGCGAGTCCATCTTTTTCTGTGACTGTCCAGATGGG
TTCGTGGGAAAGTTCTGCGAGATCAACATCGACGAATGCTCTTCGAACCC
ATGTCAAAATGGCGGAACCTGCCACGATGACGTCAACTCTTACCGATGCC
GCTGCCTACCTGGTTACGTTGGGGACAATTGCGAATCAGACGTGGACTGG
TGTGCCCTCGTGACCTGCCCGTTTGACTGGACCTGCCAGGATGACGGAAC
CCACTTCACCTGCCTGGCGCCATTCGTTCGCATGGAGGAAACATACCAGT
GCAGCAGCGCTCCCTGCCCGGAAGACATGTACTGCAAGGAGGACCGTGGC
TCGTTCTCATGCTGGACTGACTGATGTGGATCAAACGTCTGCCAGAACAG
CGGAAACTGCACCTCCTGCTTCGGCGAGTCCATCTTTTTCTGTGACTGTC
CAGATGGGTTCGTGGGAAAGTTCTGCGAGATCAACATCGACGAATGCTCT
TCGAACCCATGTCAAAATGGCGGAACCTGCCACGATGACGTCAACTCTTA
CCGATGCCGCTGCCTACCTGGTTACGTTGGGGACAATTGCGAATCAGACG
TGGACTGGTGTGCCCTCGTGACCTGCCCGTTTGACTGGACCTGCCAGGAT
GACGGAACCCACTTCACCTGCCTGGCGCCATTCGTTCGCATGGAGGAAAC
ATACCAGTGCAGCAGCGCTCCCTGCCCGGAAGACATGTACTGCAAGGAGG
ACCGTGGCTCGTTCTCATGCTGGACTGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:1918570..1920688 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96695_cuf1 |
| Biotype | protein_coding |
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