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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5683102..5686357- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00939.2 ID=Blg00939.2|Name=Blg00939.2|organism=Branchiostoma lanceolatum|type=mRNA|length=3256bp|location=Sequence derived from alignment at Sc0000003:5683102..5686357- (Branchiostoma lanceolatum)
CATGGGACAAGGACAAAGACTGGGTAACGCTTCCTTGATTTATTAAGTTT
TCCTGTTCGTAACCAATCAATCGTCCTTCATAGTATACCAAATCCATGTT
TTTGATATGAAATTTGCTTCAAGCCTTTTCCTGCTAATGCTAACCTTGCG
ACATTAGCAACCATCCGTATACCTGATCAGTTGTTTCATCTGGATCTCGT
TGCAGTAGACATAAGCTTCATGTATAGGAAATTGTACATTCTTGTTCCCA
CCGAAGGGCTATGATTTAGAACAATGTAGATGAAGATATGTTAAGATGCA
CAGAATTGTAACATTTTAGATCAAATGCATCTCGTCCGCGAGGGTGGTGC
ACAAGCCCGTGGAACAAGTGCCGCAACTACATTAGTAACGACAAAGGTAC
GTAAATGTTACAAGTACACATCTTATTTCAAAGCAAACTGTTCTGATAGC
CATTGTCTCTAGCTTTTCCAACTCAAAAACTTCAATAAGTGGTTTTATAG
ATATTTGTAAGTCACCTCGTCGGCTATATCACTACGTCGAGCAAAAAAAA
AGGGTTCTCAATGTTCTGCATTCATATTGAAAACTGTTGCTTCGGGTTTT
ATATAAAGGGCTCATTGAATTTCTATTTCATCTATGGACCTGTTGGGGAC
GTTGTTTTCTGTGCTAAGACTTTTCCTTTCATTTATATTGTCATTTTTCT
AACAATGATGTTGTTCCAAAGATGAAGGACAACACTTTGAAGACTATCGG
ATCCATTCTAACGTATCCCTATTTAGGTACTGTTATACTAATATTGTGGT
ACCTGTATTATCATCCATAGGGTCCATTCTGTGACTACCAGTTGGCTTGT
CAGCGATTCAAGAAATCATTGGGAATAGGCGGCAAGTCCTTTTTCTTCAA
TTCTAACTTAAGTAACAAGAAAAATATGCGTGTATTTGCATGTATGTGTG
TGTGTGTATGTGTGTGAGTGTGTTTGTGTATGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTAATAACAACAAGAAGTACACTGTTTT
TTTTTCTGCACATCTTCAGTCCTAACTCTTCTATATTACAGAGAGCTACT
TCTCCCATGAGCAGGACAAATGTTTCTGTGAGACATGTCACAAAGCCCGG
GGGGACGACGACTATTACGCGCGGGGTGAACCGAAGAAGAAGTACGCGGT
GCCTGTTGGATGGACCAGATTTGGTCTGAGGTGATAACATTTGTCTTATA
TATGTATAACCATATTATTTGATGTTGAGCGGTATAGACTGCGGCAGCAT
GTAATTCTGCAACAACTGACTGTCCTACCTCCTACTTTACAGCGTAAACC
CAACCTTCAAGGACAGTGAGCTGAATGTGTTCGACAACTGGCACCGTGCG
TACCACGGGACAGACCCTGATGTGGTGAAGAAGATTCTACAGAACAGCTC
ACAACTGCTTATGCCAGGTACATTATCCACCTGTTAACGGAAGTACATGT
GCCGCTCTACCCGAACACAAGTAAAGAACAACATATACGACAGAAGGATG
CTGCCGTTTTATTAGCAATGTGGGGCAATGCTCTATTGTTAATGCACAAT
TTTACTGTGTCTTCAAGCAAAAGCACTTGACGCTGTACATTTCTTTTGAT
AACCAATAGGAGACGTGGGTTTGGGTGGACTCAAATTAGGAGAGAAGGAA
GGCCATTTCAACCCTGACCGGAAACCGGACGGGTTCGACACCGCACAAGT
GTTCGTAACACCAAGCATTGTGTACGCTGGACACAAGGCCTACGCCCGGC
CCAAAAAGTGAGAAGAAACGTATTTGTTCTACATTGACCGTTGGTGTAAT
CAAGTCCATACAAACACGTGCTTATTTTGACAACATTTTTCAAGCAGTCC
GTATCGTGGACTCTTCTACGACCAAGGACTAAGCCAGTGATACTTTTAAC
TGCATCAAGTTTAAATTTGATATACCACACATCTTTAAACAGGTTCGAAG
ATGATGGTAAGGTGTACGGGGCCCGTGTCGCCTTCCAGTTGTGTATCCGG
CCGGGCAGTTACGAGATTGGTCCGGAGACGGTGGGTGCCAGGGGAGAAGG
CCGAACCATTGACCCACTCTTCAGCAACGAAGAGATGGAATGGTCCACTA
AGGAAAGAGGAGGGACTGCACTTTACGGACTACTTGTCAAGTTAGAACCA
TTTGCTGAGGGGCAGTCAGATGACCGTGTTAGAATGGATAAGTTGTTGGC
TGAATTGAGACGTCTTGAAATGGAAAGTGATGCTCTATTATGCGCTCTGC
ACTCTAAATTTAAAGTTGAAGATGATTAGACGGAGTCTGATCTTAAACGC
CGTTATGATACACATGTACACATTGAAACGTTTACATACAGTAAAAGAAC
CTTGTATATATCATTTGCATGTATTTTGACTTGCAGTAAGTTCTTAAGAA
AAATGGCACTGTACAGTTATCAAACCAGTATCTTTGTCTTCTTACATGTA
ATATATAGAGATGATATCAGCATTGAGCTATTTATTAGTAACGTGAAAGC
TGAGTAAGTCAGGCCTAAACATTAAATTCATCTATGGTACCCTTCTCACC
AGACATCGGTAAATAGGAGTGGCATTGCTGATGGCACCGACTCTATGATC
AAAGGGAAAATACCTTTGTAGTGCCGCTTAAAAGCAAAGTCAATAACATA
TCTGTTTATTGTCAAGATGGAAATATGTAATGGCTGCCAACTTAAAAGAC
ATTAAA Coding sequence (CDS) from alignment at Sc0000003:5683102..5686357- >Blg00939.2 ID=Blg00939.2|Name=Blg00939.2|organism=Branchiostoma lanceolatum|type=CDS|length=882bp|location=Sequence derived from alignment at Sc0000003:5683102..5686357- (Branchiostoma lanceolatum)
ATGCATCTCGTCCGCGAGGGTGGTGCACAAGCCCGTGGAACAAGTGCCGC
AACTACATTAGTAACGACAAAGGGTCCATTCTGTGACTACCAGTTGGCTT
GTCAGCGATTCAAGAAATCATTGGGAATAGGCGAGAGCTACTTCTCCCAT
GAGCAGGACAAATGTTTCTGTGAGACATGTCACAAAGCCCGGGGGGACGA
CGACTATTACGCGCGGGGTGAACCGAAGAAGAAGTACGCGGTGCCTGTTG
GATGGACCAGATTTGGTCTGAGCGTAAACCCAACCTTCAAGGACAGTGAG
CTGAATGTGTTCGACAACTGGCACCGTGCGTACCACGGGACAGACCCTGA
TGTGGTGAAGAAGATTCTACAGAACAGCTCACAACTGCTTATGCCAGGAG
ACGTGGGTTTGGGTGGACTCAAATTAGGAGAGAAGGAAGGCCATTTCAAC
CCTGACCGGAAACCGGACGGGTTCGACACCGCACAAGTGTTCGTAACACC
AAGCATTGTGTACGCTGGACACAAGGCCTACGCCCGGCCCAAAAAGTTCG
AAGATGATGGTAAGGTGTACGGGGCCCGTGTCGCCTTCCAGTTGTGTATC
CGGCCGGGCAGTTACGAGATTGGTCCGGAGACGGTGGGTGCCAGGGGAGA
AGGCCGAACCATTGACCCACTCTTCAGCAACGAAGAGATGGAATGGTCCA
CTAAGGAAAGAGGAGGGACTGCACTTTACGGACTACTTGTCAAGTTAGAA
CCATTTGCTGAGGGGCAGTCAGATGACCGTGTTAGAATGGATAAGTTGTT
GGCTGAATTGAGACGTCTTGAAATGGAAAGTGATGCTCTATTATGCGCTC
TGCACTCTAAATTTAAAGTTGAAGATGATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00939.2-exon-Sc0000003-1570713199:5685962..5686357 | Blg00939.2-exon-Sc0000003-1570713199:5685962..5686357 | Branchiostoma lanceolatum | exon |
| Blg00939.2-exon-Sc0000003-1570713199:5685477..5685537 | Blg00939.2-exon-Sc0000003-1570713199:5685477..5685537 | Branchiostoma lanceolatum | exon |
| Blg00939.2-exon-Sc0000003-1570713199:5684628..5684766 | Blg00939.2-exon-Sc0000003-1570713199:5684628..5684766 | Branchiostoma lanceolatum | exon |
| Blg00939.2-exon-Sc0000003-1570713199:5684391..5684515 | Blg00939.2-exon-Sc0000003-1570713199:5684391..5684515 | Branchiostoma lanceolatum | exon |
| Blg00939.2-exon-Sc0000003-1570713199:5684051..5684198 | Blg00939.2-exon-Sc0000003-1570713199:5684051..5684198 | Branchiostoma lanceolatum | exon |
| Blg00939.2-exon-Sc0000003-1570713199:5683102..5683865 | Blg00939.2-exon-Sc0000003-1570713199:5683102..5683865 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5683102..5686357 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00939 |
|
