Blg00760.0 (mRNA) - B. lanceolatum

Overview
NameBlg00760.0
Unique NameBlg00760.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:4936569..4939395-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00760.0 ID=Blg00760.0|Name=Blg00760.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2827bp|location=Sequence derived from alignment at Sc0000003:4936569..4939395- (Branchiostoma lanceolatum)
ATGCCCCGGCGGAAACCAGTCCCCTCCCTCAGGTCCATGTGCCTGCGGTG CTTCCGGAGCTTTGAGAGACTTGAGGTCGCCAGTCAACAACAGGGAGTAA CGGTCAACAGCCTGATCAGGAGACTACGTGAGTTCTGAAGGCTATATAAC AGATGATTGTTTGACCCTACATAATCCTTACAGTACTTAATGTCTTTTGG ACATGTAACGTCAATGCTACTGACTGGAATATTCTATCGTCAGTCGGTTG TCATTGTGTCCTCTTTTTTATAATCTCCAAGCAGATCTGTCGGTGGCAAA GACGGTCTTTGCCACCGGTGGCGATTAAAAGTCCCTTTACCAGTTAGATA CGGCCTCTGCCGCCGATAGATATGCTTGGAGATTACCTTTTTATCATGTA ACTTAAACAACGTGGCATTATGACGGCAAGATGATTCCATCCTTTTTTAT TTTGTTGAAATCAGTAAAAAGCTATCTGTATGACGAAATTTATTAAAATT TAGCTCCAATTCGTTGGCCCTTTGCAAATAGTGAAGAATGACAGGCTAGT CAGGGTGTTCCGAAAGGTCTGTTTGAGACTTTTCCGCATTGATGGTCAGT GAGTCAAATGATCCATCCAATGCTGTTCCACAGCGTTGTCCATCGTGGAA GACCTCGTCCAAAGCGTGCCCAGTTCTTCCCTCCAAGCCCTGCAGTTCTT ACACCCCTATCTGAGGAAATTCGCCATCTTCGGTTACGGAGAGGAGCTCA CAGAGCAACTTATAGATCAATATACGTCATGCCTGAAGACATCAAAGGTA TAAATATGTACTTCATTAGTTATATATAACGGCAGTTTTTCTTTTTCAAC GATAATATGTCCAAAGATAGGGAAAACATCTTGATCATAAATGTAAACAG TTGATTGTTCATAATTTATGATGCTAGAATTGTTACGTGTGGTACTAGCT TCATTTAATTTCAATGGGCTTACTGAAACTTCATATGAAGAAAAGTTTGT AAAATGAACAAAGATTTTGCATATATTCGAAGGGTCTCCGACAACTTGGC ATAAAAGTGAGTGGAGATGTACTGGTGACGCAAAGATTCATGGGAGCAGT CCTGAGGTCCACCACCAAGCTCGTCAAGCTCGATGTGTCAGAGAGCCCTT TTGATGACGCCCTCATGGAAGCTCTCGCAATAAGGTGACTTCTTATTGAT ATAGTATTATTTTCCTTTTGTCTTTTTAAGTTCTTTGGATCTCTGACCGC CCTGTGCAGTTGTAGGCATTCTTGTATATCTCGTGAGACAACGAAATTGT ACCCGGGTACACTTTCTTTCACCTCTATAGTTGGATTACTAGTTGAATAT ACTTTGAGCCCATCAGAAATCAGAACGTGAAGTGGTGGGTCAACAATTTT GTATGGATGCTATTGACAGGATGCTAGAAATGTGTTAGGGTGGTCTCCCA TTTATACATGCCAAATTTCAAGTAATTCCATTGATCTTAATCAAAAGTGG CATGAATCGAAATTGAAAAAGTGCTGACTGTCCCTTTCAGGAAATATCTT AGAATTTGCAGACTCCGATACGGCGGAACGCGGTAGAGATCCCGATCGGA AGTCTTGTTGATAGGCATTCCGATCCGATTCTAATCTTCAAGCAGATGTA TCGGTGGCAAAGACAGTATCCAAGGGCAAAAGCAGTTTTACTGCCACCGA TAGATCTGCTTGGAGATTGATCTCTACCAACAGAATCGCCGATTCTGCCA GATTGCAATCTCTACCCTAATATACAAAATCAATTAATTTCCTTTTACCT GATCAGCTGCCCGGCTCTAGAAGACCTGAACGTCAGCAAGTGCAAACACG TGACCGACGTGGGGCTCATCACCCTGTACTGCCCTGGGGACGAGATGGAC TCCGGGTGCAGAAACATCACCCACCTCAACGTGTCCTCCACAGGTCTGAC GTCAGACGGTGTCCTTTTCGCGCTACACGGTTGGCCGAACCTGTCGAAAC TAGACGCGGACATGTTGGTTTTTCCTCCTGAGGGGACTGTTTTACCATCG GGAACGTACAAACTTCAGACTATTAACTTTCCCGTACGTTACGAGTCACT CGAGCAGATTCATCATCTCTTTCCCAACCTTAGAAGCGTAGATCTGAGCA ATTATGGTATTCGTTACGAAGAAACGCCCCCTGTCGGAGCATTGGGTCAA CTGCAGTTCTTAGAAGAACTGAGTATAGACGCAGAGAACTTTCCATCCCA CGGACTTGACATATTCAAACCACTCGGGAGTCGAATTAAGATACTTGAAC TGTACGGCTACCATAACGTGGATCTGGCCGAGGTCGCCATTGTGTTTCCT AATTTGGTAAGGCTGGTTCTATTCGGCTGCCACTTCGAGAACAGCGGCCG GAGATTCCCGATCGAAGCCGAACTGCCGAAGCTTCGAGCGTTCATGTTCT TCCGCCTGGGCCCGTACCAGAGTGTAGAGGAAAGTTTTCCCGCGGACGAC TTTTGCAACCTCCTCGCGACTTGCAAGGAAATCGAGTTCCTCGAGCTGAC GAGTATTCAAGTTTGGACTCCCGAGGTGATCGACACTTTGTCGAATGCTC TGCTGATTCGTCTGTTGAACAGAGACGTCTTCCGACATTTGCGCGAACTG CAGCTGTGGTACTGCCATAGGTTCACCACCCGAGGAATCCTACCCATTGT AAATAATAGTGACAGCGGTCTGAAGAAACTTGGCCTGCACCATTGCGACG GTCTGTCACAAGACGACCTGCAAGACATCGAACACATCATCCACAGAAAC AACCTGGACCTTACTCTTAGGTACTGA

Coding sequence (CDS) from alignment at Sc0000003:4936569..4939395-

>Blg00760.0 ID=Blg00760.0|Name=Blg00760.0|organism=Branchiostoma lanceolatum|type=CDS|length=1464bp|location=Sequence derived from alignment at Sc0000003:4936569..4939395- (Branchiostoma lanceolatum)
ATGCCCCGGCGGAAACCAGTCCCCTCCCTCAGGTCCATGTGCCTGCGGTG
CTTCCGGAGCTTTGAGAGACTTGAGGTCGCCAGTCAACAACAGGGAGTAA
CGGTCAACAGCCTGATCAGGAGACTACCGTTGTCCATCGTGGAAGACCTC
GTCCAAAGCGTGCCCAGTTCTTCCCTCCAAGCCCTGCAGTTCTTACACCC
CTATCTGAGGAAATTCGCCATCTTCGGTTACGGAGAGGAGCTCACAGAGC
AACTTATAGATCAATATACGTCATGCCTGAAGACATCAAAGGGTCTCCGA
CAACTTGGCATAAAAGTGAGTGGAGATGTACTGGTGACGCAAAGATTCAT
GGGAGCAGTCCTGAGGTCCACCACCAAGCTCGTCAAGCTCGATGTGTCAG
AGAGCCCTTTTGATGACGCCCTCATGGAAGCTCTCGCAATAAGCTGCCCG
GCTCTAGAAGACCTGAACGTCAGCAAGTGCAAACACGTGACCGACGTGGG
GCTCATCACCCTGTACTGCCCTGGGGACGAGATGGACTCCGGGTGCAGAA
ACATCACCCACCTCAACGTGTCCTCCACAGGTCTGACGTCAGACGGTGTC
CTTTTCGCGCTACACGGTTGGCCGAACCTGTCGAAACTAGACGCGGACAT
GTTGGTTTTTCCTCCTGAGGGGACTGTTTTACCATCGGGAACGTACAAAC
TTCAGACTATTAACTTTCCCGTACGTTACGAGTCACTCGAGCAGATTCAT
CATCTCTTTCCCAACCTTAGAAGCGTAGATCTGAGCAATTATGGTATTCG
TTACGAAGAAACGCCCCCTGTCGGAGCATTGGGTCAACTGCAGTTCTTAG
AAGAACTGAGTATAGACGCAGAGAACTTTCCATCCCACGGACTTGACATA
TTCAAACCACTCGGGAGTCGAATTAAGATACTTGAACTGTACGGCTACCA
TAACGTGGATCTGGCCGAGGTCGCCATTGTGTTTCCTAATTTGGTAAGGC
TGGTTCTATTCGGCTGCCACTTCGAGAACAGCGGCCGGAGATTCCCGATC
GAAGCCGAACTGCCGAAGCTTCGAGCGTTCATGTTCTTCCGCCTGGGCCC
GTACCAGAGTGTAGAGGAAAGTTTTCCCGCGGACGACTTTTGCAACCTCC
TCGCGACTTGCAAGGAAATCGAGTTCCTCGAGCTGACGAGTATTCAAGTT
TGGACTCCCGAGGTGATCGACACTTTGTCGAATGCTCTGCTGATTCGTCT
GTTGAACAGAGACGTCTTCCGACATTTGCGCGAACTGCAGCTGTGGTACT
GCCATAGGTTCACCACCCGAGGAATCCTACCCATTGTAAATAATAGTGAC
AGCGGTCTGAAGAAACTTGGCCTGCACCATTGCGACGGTCTGTCACAAGA
CGACCTGCAAGACATCGAACACATCATCCACAGAAACAACCTGGACCTTA
CTCTTAGGTACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00760.0Blg00760.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00760.0-exon-Sc0000003-1570713199:4939269..4939395Blg00760.0-exon-Sc0000003-1570713199:4939269..4939395Branchiostoma lanceolatumexon
Blg00760.0-exon-Sc0000003-1570713199:4938599..4938762Blg00760.0-exon-Sc0000003-1570713199:4938599..4938762Branchiostoma lanceolatumexon
Blg00760.0-exon-Sc0000003-1570713199:4938212..4938363Blg00760.0-exon-Sc0000003-1570713199:4938212..4938363Branchiostoma lanceolatumexon
Blg00760.0-exon-Sc0000003-1570713199:4936569..4937589Blg00760.0-exon-Sc0000003-1570713199:4936569..4937589Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:4936569..4939395 -
Properties
Property NameValue
GeneIDBlg00760