Blg00745.22 (mRNA) - B. lanceolatum

Overview
NameBlg00745.22
Unique NameBlg00745.22
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:7965531..7969888+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00745.22 ID=Blg00745.22|Name=Blg00745.22|organism=Branchiostoma lanceolatum|type=mRNA|length=4358bp|location=Sequence derived from alignment at Sc0000003:7965531..7969888+ (Branchiostoma lanceolatum)
TCTAAGATCATAATACAAAGACGCTGTATACATCAAACGGATGTTTAAAA AGAAAAAAAAGAGAGAAAAAAATGTCAGTTCCACGACCTTCCACGACGAG CTAGTGGTATACGCCTTTCTGCCGAACTATTTCAAAGGTATATAATGTTA AAACCTCTATGCATGGTAAATTTTTTTGTCATTTTCTTGACAAAACTAGT TTCTTCTTGTTCAGTTTTGTGGTATAGATGTAATATGGCCATGTACAAAA ACATGGATGTAATGTACTACCTTCCAAGATCCATGGATCGCATGTAATTT TCGATGCATGTTCATGCAGGGTTGAAAGGGTTGAATCAAGATCCACGCAT GCAACGTAGATGCATCGTACCATGGTATGATTGGGTCTCAGATCATTTTC GCGTCATCGCGAAAATGAAAAAAATCTTATAGGAAGGTTATACAAATATT TTTCATCTCTGTCCTATTTATAGACATAACAAAAGAGACATCGTATTACT AATGAAAATGTGTAATTGGCGACGCCTCAGGGGCGAAGCCGTTTTCTGAC AGAAACTAACAAGTGATGTTGTCGGTCTCTGTCTCAGTACCTGGTGACGG GCATTCTGGGAGTTGTATCAAGCCACAAGAACACCAAATGTGTGGTGAGT TAGTATATCGTTATTTTGGACATCAGAAAAAATCGGCAAACCTCCCTATA CTGCATGTATCAAGAGGAACAACATTCCAATCATAGTCTACTAGCAGATT CGGGTTTGCTTACGACTGAAACTGTTATTCAATTGTCGGCACATTGTAAA AAGTCTCCTAGCTCTTCGTTGGTCTAACCTGAAGCCAGCAGCCCATTCAG CATCCCTATATGCAGCCGGTTCTAGCAGCCAATTCAGCACCCGGATTCAA CACATGATATCATGATACAAGCACAATCCAGACGCCCAGGCTAGCCTTTT TTAAAACTTCAACATGGGTGATAAATATTGTAACAAACCTTTAGCGATAA ATGTTGCGTCTTAAAGCTTTCTTTTTATCTCTGATATTTTTTCTAGCTCA TCGGCCTTCTTGCGATGTCTTGTTTGAGTGTGCTGATGACACTTTGTGGG ATCACGACAGCCGCCATCGCTGTGGATGCGGAACCCTGGAACAACTTCCC AGGCCCCGGGGAGTGTCACTTTAACTGGGGCAAGGAGCACTGCTCAGGCT TGGACGTGAGTGCATTTATCCTTAAAGCGGGTATCTGATGGGGCCGCACC GGTTTCTGACTATTTGCGAAAGGCTTTTACCAACTGACGCGGACAGGCGC CAAAGGGCATCAATTTGTCGCCTGAAAAGACGATTCTTTTTAATGAAAAA ATACCGCAACTGGCAACAAGGTGCTAATGGGCTACTCTCCAAGTAGAGGA GGCGTTCCGGCAGGTTTTGGACGTGTTTTTAGGCGTTTTGTTCGGGCTTT CTACTTCGTCAAAAAAATGACAAAGTAGAAAGCCCGACAAAAACGCCTAA AACAACGTCAAAAACCTGCCGGAACCCCTCCTCTGCTTTGAGAGTACTAA TGGGCGTGAACTTGACACCAACAGTCGCGATCACTGTATTTCTCTTTTTT TTTTAAAGAAACTTGATCATACATTGGTTTTTAACTCAGTGACAACGCTG CGATTTCCAGTAGAGTTATCCTGTATNTTTAACTCAGTGACAACGCTGCG ATTTCCAGTAGAGTAATCCTGTATCTAATTTGGGGCCGAAACTGAGAATG AAACATACCGGGCGCGGCTATTTTGTTTGTAGAGGTTACACATTTTGCAT GGGCGTCGTACGTCAGTTGGCGAAAGATTCGCAAAGGTGTCGCAATAATT GGTCGCAAACAAGCGCAGTCCAGTGTGCTACCCACTATACCAATATCATT GCAACACTGGATCAGTACAGGTATAGTCTCTTGCAACGATGCTACAATGT TAATTGTCATTCGTAAACGCAGAAAGATTATAAAAGTCAGGAAAAACATG CAATTTTCGTCATGTTACAGATCGCCCGTTACTCTATTGACGCGGCGAAC CTGCTGTTTGCGGTGGTTGAGCTGGGCCTGTCCATCGCCACCATAGCAGT CTGCAGCCACACACTGTGTAAGGGGGGCAGCAGGTGCTGTGGGGAGGGGG GCAGCAGCTGCTGTGGGAATGGTAACACTGGAAACTCCTACCAGGTGAGC AGTTCTCCTTCCTCTTTTTGTTCGTTTTTGGCAACACTTCAGGGGCGGAG CAGTCTTCTCATCTGCTTCCATGATGGAATCTAAAGAGTAATTAGCTTGT CTGTATATGTTTATATATAGCCATGCTCAGGATGAAGACAGACTATCGAA ACTTTGGTTAAAGGCACCCAGAGCATTTTATGAGGCTTGAAAACTGTAAA TATTCTAGTTGCTGTAATCTTTATGAAATTGACATCTAATGCCACTGTTT ACCACATTTGCGTGCGAATTTCTTATCAAAAGTGCTCAAAAGCGGCACAA AGATAAGCTACATTGTGATCTTTTAGTTTCACGCGCCTAGTGTAAATAGA CCGATAGCATAGCCCCGCCCATCTCCGTCAAAACGTAGAAATGCAAAATC AAAACATAAAAATGCAAATATTTGACGGACATGCAGTCACTCTCTCATTG GTCGAACCGTTAATTGTGGTGGACAGTCAGGATCAGTCTATTAGGGCTTG GGATTTCTATCTGTTCTCACCACACAACGACATCGTATCTTTGCTCCTTT AATGGCGATATGTAATTGTATAGTGTTATTGGAACTTACTATGTGTAGGA ATGACTAGAAATTGGAGTTTTCTGATTTTCACGTTTCAAGCCTCATAAAA TGCTCTGGACGCCTTTAAAGACGAAGAATTTGGTTTTATACAAAATCAAA CTAGAAGTGTTCACTTATGTATCTTATTTATTTTTCTCTAAGTCTGGAAT CCATTATTGTTAGCTTTAGTTCTTAGTTCGCTTCCAACATTTTCATCCCG TGTATATTCTAAACTGACAATCTTGTACCTAACATTTCACCAGACCATGC ACGAGGTTGGGCAGGGCGGACGGCTGGTCCCGCTGCAGAACTTTGCAAAC ATCAACTACGCTCCAGCGCACTCTGCGCATGCCCCGTCCTACGTCATCAG CAGTCCCATACCTCCCCAACACGGAGATGTGCAGCAAGGTAGGAGATACT ATACTAAATGTGGACTTAACGGTCAAATCCATGTGTGCAGGTGCAGATAT TGCTAAACTTGCCATTATTCCTTCCAAATGGTCTTCATTGTTTCATTGAC ATGGTCTCCATACATTGTGCAAGCCGGCGCTACATTACTTTCAATAACTT TGTTTTTAAAACATACATAACGTAACATCATGATCATGTCTACATCAGTA ATGCATGCTGTATATGTGTGATGCAGGCATTCACGTAATCTGGAACCTCG AAATTTTATCTACCTACCTACCTACCTACCTACCTACCTACCTAGTTCTT GACCTCCGGGTCGTTGGGGGGGGGGGGAGGTAGCAATGAAGATGGACATC TGTCTCCAGGCTCGTTTGTTTTTCCAGTCTCATCTAATTGAAGCATCGTG TTTTCTATAGGGATGGCTGCAGGTACTGGGGACCAGGCTATCACTCAGGC GCATGCGCAACAAGAGCAGCAGAAAGACGAGCCACAACAGCATCAGAGTG TCTCCCCAGACGCGCATGCGCAACCTGGTTACGTCAGCCCTCCACCGGGG TACAACCAGGCTTAAATCATCCTTCTCCAAGCAGATGTAGGGTCAACCTT GTTTAAGCTCGGAGACCATAGATCTCGAGACAACTTCACTCAACCAGGGT CCACATTTGTTTACTGTTCAACGTATTCGTGAGAGTATCGCTGGCATATA ATCAGATAACTTTAATTTTCTTCAATGACAGAAATTAAGCCAAGGAAGAA CGATGCACTGTAAACAAAATATAGATTTTAAAACAATTTGTTATATTGTA TAATATCAATGTCAGCTAACCGTCAAGCGTTTAATAGATGCGATTTAGTA GATGATAGGTACATGTAATATACTTCAGTATGTAAGAAATCGAAGTTAAG GAGAATTTTTCATGTATGAGCTTTTAGACAAGTGAGCTTCATCTTTTATG TATTGGTCAAAAACAATCGGATTTGCATCGGACCTGGCTATAGACTGTAC CTAATATACTTTATGATTGTTAAAGCAGGGTTCTGTGACAAACCAGGTGG CTGAATTTTGTTAACTCGGTTTAACAAACGGCGACCCCGTGACTGTGGCG TTAACATTTAGATAAGTGAGCTTCATCTTTCATCTTTTATGTTTCGGTCA AAAACAAT

Coding sequence (CDS) from alignment at Sc0000003:7965531..7969888+

>Blg00745.22 ID=Blg00745.22|Name=Blg00745.22|organism=Branchiostoma lanceolatum|type=CDS|length=615bp|location=Sequence derived from alignment at Sc0000003:7965531..7969888+ (Branchiostoma lanceolatum)
ATGTCTTGTTTGAGTGTGCTGATGACACTTTGTGGGATCACGACAGCCGC
CATCGCTGTGGATGCGGAACCCTGGAACAACTTCCCAGGCCCCGGGGAGT
GTCACTTTAACTGGGGCAAGGAGCACTGCTCAGGCTTGGACATCGCCCGT
TACTCTATTGACGCGGCGAACCTGCTGTTTGCGGTGGTTGAGCTGGGCCT
GTCCATCGCCACCATAGCAGTCTGCAGCCACACACTGTGTAAGGGGGGCA
GCAGGTGCTGTGGGGAGGGGGGCAGCAGCTGCTGTGGGAATGGTAACACT
GGAAACTCCTACCAGACCATGCACGAGGTTGGGCAGGGCGGACGGCTGGT
CCCGCTGCAGAACTTTGCAAACATCAACTACGCTCCAGCGCACTCTGCGC
ATGCCCCGTCCTACGTCATCAGCAGTCCCATACCTCCCCAACACGGAGAT
GTGCAGCAAGGGATGGCTGCAGGTACTGGGGACCAGGCTATCACTCAGGC
GCATGCGCAACAAGAGCAGCAGAAAGACGAGCCACAACAGCATCAGAGTG
TCTCCCCAGACGCGCATGCGCAACCTGGTTACGTCAGCCCTCCACCGGGG
TACAACCAGGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00745.22Blg00745.22-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00745.22-exon-Sc0000003-1570713199:7965531..7966735Blg00745.22-exon-Sc0000003-1570713199:7965531..7966735Branchiostoma lanceolatumexon
Blg00745.22-exon-Sc0000003-1570713199:7967551..7967724Blg00745.22-exon-Sc0000003-1570713199:7967551..7967724Branchiostoma lanceolatumexon
Blg00745.22-exon-Sc0000003-1570713199:7968574..7968718Blg00745.22-exon-Sc0000003-1570713199:7968574..7968718Branchiostoma lanceolatumexon
Blg00745.22-exon-Sc0000003-1570713199:7969141..7969888Blg00745.22-exon-Sc0000003-1570713199:7969141..7969888Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:7965531..7969888 +
Properties
Property NameValue
GeneIDBlg00745