Blg00744.0 (mRNA) - B. lanceolatum

Overview
NameBlg00744.0
Unique NameBlg00744.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:3109953..3112316-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00744.0 ID=Blg00744.0|Name=Blg00744.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2364bp|location=Sequence derived from alignment at Sc0000003:3109953..3112316- (Branchiostoma lanceolatum)
ATGGGACGGCATGGATGTGGTAGTATAAACGACAATGGTGAGAGACTTGT GGACTTCTGCCTAAGCAACAGACTGGTAATAGGTGGAACCATCTTCCCTC ACAAAAACATACATAAACTTACCTGGAATTCACCAGACGGATACACCATC AACCAGATTGACCATGTGATGATAAACAAGAAGTGGCAGAGATCTCTTCT GGATGTCAGAGTGTACCGAGGTGCAGATGTGGGTAGCGACCACCACCTGG TAATATCCAAGATTAGACTTAAGCTGCGAGCAACACCTCCCACCAAGAAA CGCCTTAAAGTGTTCGACACCTACAAACTACACACCCCAGAAATCAGACA TGAGTTCGCCCTTGAGCTAAGAAACCGCTTTCAAGCCTTGGAGAATCTCG AAGATGAGGGGGAGCAAGACATTGTAGAAACAACATGGAATACAATTACA AAGGTGTACAGTGAAACAGCGGAGAAAATCCTTGGCTATAGAAAGAGGAA AGACAAGGAGTGGATTACACCGGAGACTTGGAGGAAGATTGAAGAGAGGA AAATAGCCAAAGGAAAGATGCTGAACACAAAGTCCCAGAGGGCAAAAGAC ACATACAGAAACAAAGACAAAGAGGTTAAACGCAGTGCTCGGCGGGACAA GCGAGCCTACGTTGAGGAGTTGGCATGCGAAGCAGAAAGGGCTGCCACAA GAGGGGAGCTAAGTGCAGTGTATAGAATAACTAAAACACTTTGTAACAAG AACAGTGCCTGCTCGGCCCCTGTCAAGGACAAACAAGGCAGGTTGCTTAC AAACGAGCAAGAACAAGCAGAAAGATGGGCTCAACATTTTGAAGAGGTGT TGAACAGACCCGAGCCGGACGAGCCAGCGGACCCTGCTCCGTCTGAAGAT ATCACCATCAACACAGACCCTCCCAGTCTTGAAGAAGTAGAAACAGCAAT CAAAGCCATGAAGAACAGAAAAGCCCCAGGCATTGATGCCATACAAGCGG AACTCCTGAAGGCAGACTGTGCCACAGCTGCGCTACTACTCACTGACCTT TTTGCCAAAATATGGGAACATGAAGTTATTCCCCAGGACTGGAGCAAAGG GCTCATCTTCAAGATTCCCAAGAAGGGAGATCTAAGTAACTGCAACAACT GGCGGGGAATAACCTTACTGTCTATCCCCAGCAAGGTGTTTTGCAGAATC CTTCTCAAAAGGATTGACAGTGCCATCGATTCCAAGCTAAGGGAGGAACA AGCAGGTTTCAGGAAAGGACGTGGCTGCTCAGACCAGATCTTTGCTCTAA GGAATATCATCGAACAATGTGTTGAGTGGAATTCCCCTCTGTTGATTAAC TTCATTGATTTCCAAAAGGCATTTGACAGTGTACATAGAGAGAGCCTGTG GAAAATACTAAGGGCCTATGGCATCCCACCCAAGATTGTCTCCCTCATTG GGAAATTCTACGAACACTTCGAATGCAGTGTAATTACAGAGAACAGTTTG TCTAAACCTTTCTGTGTTAAATCTGGCGTCAGACAGGGTTGTATTCTCTC CCCTATCCTGTTCCTCATCACTATTGATTGGGTTATGCGAGAAACTACGT CAGATCGTCCCCGTGGTATCAAATGGTCTCCGAACATGTACCTTGAGGAC CTCGATTTTGCTGATGATCTAGCGGCCCTTTCTTCTGTCCGCACATCACT CCAGGAAAAGACCGACCGCCTAAGTGACCGAGGCAAACAGACCGGACTTT ACATTAACAAGAAGAAAACACAAGTGATGTACATCAACACTCCTGCAAAC CCTCCCATCAGTATAGATGGGGAGGCATTGGAGGGCGTAGGAACTTTCAC CTACCTGGGAAGTGTGATGAGTGCAACAGATGGTACCCAAAAGGACATTA AAACCCGCATAGACAAAGCAAGAGGTTCCTTCAGTTGTCTGCAAAATATC TGGAAATCCAAGCAATACAGCCTCAAGACCAAAGTCAGACTCTACAACAG TAATGTGAAATCAGTTCTTCTGTACGGCTCCGAGAGCTGGAGAATGACGA AGACAGACATGAGGAAGATCAACTCTTTTCACAACAGCTGTCTACGTAAG ATCTGCAACATCTTCTGGCCAAGTAAGATCTCTAATGCTGAACTGTATCG TAAAACTGGATGTAGAAAACTCACCACTGAGATCACAAGCAGAAGACTCA AGTGGCTAGGGCATGTACTAAGGATGACAGAAGACAGAATCCCCAAAGCT GCCCTGAACTGGAGGCCAACAGGAAAGAGGAAAAGAGGCAGACCAAAGAC CACATGGAGGAGAACAGTGTCAGACGACCTGGCGGCCATGGGCCTGTCCT GGAGAACTGCATGA

Coding sequence (CDS) from alignment at Sc0000003:3109953..3112316-

>Blg00744.0 ID=Blg00744.0|Name=Blg00744.0|organism=Branchiostoma lanceolatum|type=CDS|length=2364bp|location=Sequence derived from alignment at Sc0000003:3109953..3112316- (Branchiostoma lanceolatum)
ATGGGACGGCATGGATGTGGTAGTATAAACGACAATGGTGAGAGACTTGT
GGACTTCTGCCTAAGCAACAGACTGGTAATAGGTGGAACCATCTTCCCTC
ACAAAAACATACATAAACTTACCTGGAATTCACCAGACGGATACACCATC
AACCAGATTGACCATGTGATGATAAACAAGAAGTGGCAGAGATCTCTTCT
GGATGTCAGAGTGTACCGAGGTGCAGATGTGGGTAGCGACCACCACCTGG
TAATATCCAAGATTAGACTTAAGCTGCGAGCAACACCTCCCACCAAGAAA
CGCCTTAAAGTGTTCGACACCTACAAACTACACACCCCAGAAATCAGACA
TGAGTTCGCCCTTGAGCTAAGAAACCGCTTTCAAGCCTTGGAGAATCTCG
AAGATGAGGGGGAGCAAGACATTGTAGAAACAACATGGAATACAATTACA
AAGGTGTACAGTGAAACAGCGGAGAAAATCCTTGGCTATAGAAAGAGGAA
AGACAAGGAGTGGATTACACCGGAGACTTGGAGGAAGATTGAAGAGAGGA
AAATAGCCAAAGGAAAGATGCTGAACACAAAGTCCCAGAGGGCAAAAGAC
ACATACAGAAACAAAGACAAAGAGGTTAAACGCAGTGCTCGGCGGGACAA
GCGAGCCTACGTTGAGGAGTTGGCATGCGAAGCAGAAAGGGCTGCCACAA
GAGGGGAGCTAAGTGCAGTGTATAGAATAACTAAAACACTTTGTAACAAG
AACAGTGCCTGCTCGGCCCCTGTCAAGGACAAACAAGGCAGGTTGCTTAC
AAACGAGCAAGAACAAGCAGAAAGATGGGCTCAACATTTTGAAGAGGTGT
TGAACAGACCCGAGCCGGACGAGCCAGCGGACCCTGCTCCGTCTGAAGAT
ATCACCATCAACACAGACCCTCCCAGTCTTGAAGAAGTAGAAACAGCAAT
CAAAGCCATGAAGAACAGAAAAGCCCCAGGCATTGATGCCATACAAGCGG
AACTCCTGAAGGCAGACTGTGCCACAGCTGCGCTACTACTCACTGACCTT
TTTGCCAAAATATGGGAACATGAAGTTATTCCCCAGGACTGGAGCAAAGG
GCTCATCTTCAAGATTCCCAAGAAGGGAGATCTAAGTAACTGCAACAACT
GGCGGGGAATAACCTTACTGTCTATCCCCAGCAAGGTGTTTTGCAGAATC
CTTCTCAAAAGGATTGACAGTGCCATCGATTCCAAGCTAAGGGAGGAACA
AGCAGGTTTCAGGAAAGGACGTGGCTGCTCAGACCAGATCTTTGCTCTAA
GGAATATCATCGAACAATGTGTTGAGTGGAATTCCCCTCTGTTGATTAAC
TTCATTGATTTCCAAAAGGCATTTGACAGTGTACATAGAGAGAGCCTGTG
GAAAATACTAAGGGCCTATGGCATCCCACCCAAGATTGTCTCCCTCATTG
GGAAATTCTACGAACACTTCGAATGCAGTGTAATTACAGAGAACAGTTTG
TCTAAACCTTTCTGTGTTAAATCTGGCGTCAGACAGGGTTGTATTCTCTC
CCCTATCCTGTTCCTCATCACTATTGATTGGGTTATGCGAGAAACTACGT
CAGATCGTCCCCGTGGTATCAAATGGTCTCCGAACATGTACCTTGAGGAC
CTCGATTTTGCTGATGATCTAGCGGCCCTTTCTTCTGTCCGCACATCACT
CCAGGAAAAGACCGACCGCCTAAGTGACCGAGGCAAACAGACCGGACTTT
ACATTAACAAGAAGAAAACACAAGTGATGTACATCAACACTCCTGCAAAC
CCTCCCATCAGTATAGATGGGGAGGCATTGGAGGGCGTAGGAACTTTCAC
CTACCTGGGAAGTGTGATGAGTGCAACAGATGGTACCCAAAAGGACATTA
AAACCCGCATAGACAAAGCAAGAGGTTCCTTCAGTTGTCTGCAAAATATC
TGGAAATCCAAGCAATACAGCCTCAAGACCAAAGTCAGACTCTACAACAG
TAATGTGAAATCAGTTCTTCTGTACGGCTCCGAGAGCTGGAGAATGACGA
AGACAGACATGAGGAAGATCAACTCTTTTCACAACAGCTGTCTACGTAAG
ATCTGCAACATCTTCTGGCCAAGTAAGATCTCTAATGCTGAACTGTATCG
TAAAACTGGATGTAGAAAACTCACCACTGAGATCACAAGCAGAAGACTCA
AGTGGCTAGGGCATGTACTAAGGATGACAGAAGACAGAATCCCCAAAGCT
GCCCTGAACTGGAGGCCAACAGGAAAGAGGAAAAGAGGCAGACCAAAGAC
CACATGGAGGAGAACAGTGTCAGACGACCTGGCGGCCATGGGCCTGTCCT
GGAGAACTGCATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00744.0-exon-Sc0000003-1570713199:3109953..3112316Blg00744.0-exon-Sc0000003-1570713199:3109953..3112316Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00744.0Blg00744.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:3109953..3112316 -
Properties
Property NameValue
GeneIDBlg00744