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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:4411287..4417814- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00736.0 ID=Blg00736.0|Name=Blg00736.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6528bp|location=Sequence derived from alignment at Sc0000003:4411287..4417814- (Branchiostoma lanceolatum)
ATGTTCGTATTTTTATATTCCTCAGGAACCAGCGCGACTGGATGTGGAGG
TAACCTGACGGCTCCCTCTGGAGGCCCTGTGACATCACCGAACTATCCCA
GTAACTATGGCAACAATGAGAGATGTGGGTGGTCGATCACCGTACCAGAG
GGAAGCATCATTCGTCTCACGTTCGACAGTTTCAACACTGAGAAAGGTTA
CGACTTTCTGACCATCTACGATGGAGCCAGTGATAGTGCTGCAGAGTTGC
AACGGTAATATGTTCTAAACACTTAAGCAACATTCTGATGAAGACGTTAC
CGTTTATAGGTGTAACTTAAGAGATATGATAATGACCAATCATTGTGGGA
TATACAAGCTGCCTTTCTGCAAGCAATGAATTTATCCTGGATAATGGAAA
TATAACAGACCTGAACCCAGAAAATATTACAACAGCATGCGTTTCTAACA
TGATTGTTTATTCCTTCCTTTCCAGGTTATCAGGCCCACAGTCAGTTAGT
CCTATCACCAGCACATCTAACATGATGTTCCTGAGGTTTACATCTGACTA
TTCTGAGACTCAACAGGGGTTCCAGCTGGTCTACATAAGTAAGGTCTTTG
CTTGCACTTCTCGCAGTAAAGCCGGCGTCACAATTCATGCGAGCATCGGC
CGATTTTGTAGATCGCCGAAAGCTCGCCGAATTTCAAAATCGCCCGAGCG
TCGACCGTATTTTTCGCTAAAAACCTGCCCCGTCACAAATTGAACGGAGC
TCGGGCGAACACTAATAATCATAAATCTCACATAAGACGGTACCATCACT
TGGACACCGACGAAGTCAGAACCAACTGACCTGGTAACATGCTCAAATTT
GGACCAACTTTACTTTCTGAGTTGTGGCAAATCTGTAGGGCATGAGTGAA
GTGGACGGGCACACTGAAAATAATACCATAAACAGGAATGTTGTTATAGA
CCAATCCAAATACTAGCGCAGGAGCCACAAAGTCAACAGATAAGTCGTTT
AACCCCGATCCAAACATTTTCACCAAACGGAAATCGACCGAAGCTTGGGC
GAACGCCGTCCGAGCTTCGGCCGACCGTTGATAAGCCTATCGACGCCCTG
CCGACGCCTGGGCGTGCCTCGGCAGACAAACGTAGATCTATAATGACTCA
GTGGACTTTCAACTAGTCATTTGTGGAGGAAAAACTCAGGAAATCAAGTC
AAGCCTCAAAAGTCAAGCCCCAGTTCATAAATATATGAATTGAAAACATC
CAAACCAATAACAAAAGAGAAACAGGAAGTATTGTCTTCGGTGTCCACAT
TTTATTTATAACAATTTTTTTTCAATGACTTTGCGATTGAATTGTCTTTC
ATGAGAAAAGTTTGGCAGAATTCTTTGACAAGTTAATATTAGTATTGGTT
GATACTACAGTATCATTTATCATCTTATGTTATAAACCAAACAGTATCAT
TTATCATCTTAATATGTTATAAACCAAACCAAATCCAGGGCCCCACTGCA
AAGCAGTGTATAGTGCACTGAGTTGGGCCACCCTGGCTAAATAAAACAGA
AACAAACAAACAAACTGTCGTTACCTTTTATTTATAAACAAGAAGGAGTT
CGGCCGGAGCCCGTCCAAGCGCCCATCGACACCAGTACAACGCTCGCCCG
AAGCACGCCTTACTTTTCATGAGTCGGGCGGAACACTGACGACGGTCGTC
CGATTATTGTACAAAGCCCGTGCGAGGCTCGCACGAGGCCGAAGAGTTCG
GGCGACCTCCGACCGACCAAAAATCGGGTCTAAAATCCTCGGATGCCCGC
TCGAATATTGGCCGAGCGCTGGGCGTTGCTCGGGCGAGCTACGGGCAAAC
TGTTGACGAGCTGTGCGAGTTCAAAAATCGTCGCCGAGGCCTCGCTGAAT
TTAAGCGCAGCTTCCAGTGACCCGCGAACGTCGGCCGAGCTCCGAAAATT
CGCCCGATGCCCGTAGAATCGACAGAACGTCGGTCGTACTTCGACCGAAA
ATCGCCATTTGGAGCTCGCCGACAAGTCGGCCGAGCTAAATTCTTGATTT
GTGACGGGAGCTTAAGCATGCTATCATACTGCCAATATAAACTTTATAAT
TTTTTGGGGGTGGGGGTGGGGGTGGGGCTCCGTCTCCAGGCTTTGTGTGT
TTTTAAAAGAGATGATGAATCGGTAATTGTAAGGAAGGAGATTGATAAAC
TTGTATTGTTTTTATTTCAGGCAGCACTCCAGGCCATTGCTGGGATCCAG
GTGTACCAGCCAATGGGAACAGGGATAACAACAGTAACTTTACATCAGGA
CAGACGGTCAGGTACACCTGTATGGCCGGGTACCAGCTGTGGGGGACTGC
CTATATAACCTGCCGGTCGAACGGGACATGGAGTGACGCTACACCAACTT
GCGGAGGTAAGATAAAAATTACTGGTTAGGGTTGGAATTTCATATGGTTA
ATCACATATGTGTACCAGTGAGTTACTGACCCTATTTGAATCTAACTCCA
ACATATAATCATCATTTTAAAGTGACTCTGTTTCTGGCTTTATCTTTTTT
AGACCGGGCTTTTTAGTTTCCCTTGGACGGAAACAGGAACTAAAAACACT
TATTTGAATGTTGTTGTTTTTTGCATGAAAATATCAGGAAGTGACGACTG
TGAAAGGAAATTTGACTGTGCCCAGGTTAATGATATGGCCTGCCATCTTT
GATTTTGAACTATGACGTAATCAAATTAGTATGATTAGTTAATATCAAAT
CATGATAGTTACAACAGATACATAAATGTAGTTAATGTAAGAAATAGGTG
TGGTTTAGCAAGAAAGCCTGCAAACTACACAGTTAAAAACGAAATGAACG
AATGTTGTAAAAAATGCCTGTCAGAAACCCGTTGCTAAGGCAACACGAAA
AATAATGCACGTACCAAATATTGTTTAACGCTCGTTCTCTTTTAAATGTG
CTTATTTCGTAATCTCCGTTACCGTTAGAAGTAAGACGTTTCTGACATTA
TACGATATGCCACATATAAGGTACGCAACTGCCGTTTTTAAAGCTAGAAA
AGTTTTAAGTCGTCATAAAAACTACAGTTTGACATCTTATATGTGGCATA
TCCTAATGCCAGTCTTATTTCAATCGGTAACGGAGATATTATCTTAATAT
CTCGTAGTGTGATGGAGAAGTTATCATAGCACGGTAATAACAAAACAACA
ACCTACTTTCATATAGACAATTAGTGGTTGAAATTGAAGATAATATTATG
ATATTATGCTCAATAAATCACCAACGCAAAAATTACACAAAATATGGAGA
AGCTACTTAGTTATTTTCCATATGACCTACATTGTCATTTTCCATAATTG
CATCCATCTTCCATGTAGCCCACGGGCACAACTTTACGTTGAAATTAAAG
CCAGGACCCACATTCACTTATAGATAACTTACAAATACAAGAATAAAAAT
TCTGTCATTTTCCGTCTTTGAAATTATTTAGAAGTTGTTTTCTCCTTTAT
TCTGTTAATTACGTCCTCATTTGCAGGCTATTAGACTGAGGCCGATATGT
TTAGAAAACGTGCGCATCGGGCTGTCATATAGGATCATATAGTAACTGGT
ATCACGATCCGTGCGCCATATACAGAATGTACAACAGCTTTGGCGCGTTG
TTATGGAACCATAGAGGTCAACGTTAGGTTGACACCACAACAAAAGTCAA
ATGATGAGCAAGCTCTTTGGTAACCCATCCTAGTGTTATAATCGGACTTG
GATAAAGTATATCTATGCCTAGCTAGATAACCCCGAATGACACATGGTCT
CCCTTCACAAAGCGACGTGACGTTACTTGCCCCGATGATGGTATTTCTCC
TTCCTCAGAATGTGGAGGTGACCTGACGGCTACCTCTGGAGGCCCTGTGA
CGTCACCGAACTATCCCAGTAACTATGGCAACAATGAGAGATGTGAGTGG
TCGATCACTGCACCAGAGGGAAGCATCATTCGTCTCACGTTCGACAGTTT
CAACACTGAGGACGATTATGACGTTCTGACCATGTACGAAGGAGCCAGTG
ATAGTGCTGCAGAGTTACAACGGTATTGTGTTCTAAACACTTAAGCAACA
TTCTGATAAAGACGTTACCGTTTATAGGTGTAACTAGACATATGGTGATG
ACCAGTCATTGTGGGATACACAAGCTGCCTCTCTGCAAACTTCAATTCAT
TCTTGATANCTAGACATATGGCGATGACCAGTCATTGTGGGATACACAAG
CTGCCTCTCTGCAAACTTCAATTCATTCTTGATAACGGAAAGATAACAGA
CCTGATGCCAGGAAATATCACTACAGTTTGCGTTTCTAACATGATCGTTT
ATTCCTTCCTCTCCAGGTTAACAGGGCAGCAGTCAGTCAGCCCTATCACC
AGCACATCTAACACGATGTACCTGAGGTTTACATCTGACGGTAGTGCGAC
GCATCAGGGGTTCCGGTTCTCCTACATAAGTAAGGTTTCATGGCACTTCT
CGCAGTAAGCACCCTATCATACTGCCAAAATAAAATTTATAATGTTTGGG
GGATGGGGCTACGTCTCTAGGTTTGTGTGTTTTTAAAAGAGATGATGTAG
CAGTGACTGTGAGGAAGGAGATTGATAAATTTGTATTGTATTTTTTTCTT
TCAGGCAGTACCCCAGGCCATTGCTGGGATCCAGGTGTGCCTGCCAATGG
GAACAGGGATAACAACAGTAACTTTACATCAGAACAGACGGTCAGGTACA
CCTGTACGCCCGGGTACCAGCTGTGGGGGACTGCCAACATAACCTGCCAG
TCGAACGGGACATGGAGTGACGCTACACCAACTTGTGGTAAGATAAAGCT
TATTGGGCAGGGTTAGAATTTCATTGTTAATTATCCTTGTGTACCAGTGA
GTTAATGACTCTATTTGAAGCGTTAAGGCGTAAATTTTTGATCTCAACCA
TATCATGTTCTAACTTACTTTGTTACTTCTTTAAATAGTTTATGTTCCTG
CCTAATTTTCACATAATCGCACGCTGGCATCGTTTGGTACGTATTATCTG
AATCTCTTGTATTGTAATGGCTGATATAGCATAGCACGGTAATAGAAGCT
ACAGCCAACAAGGTATCNCTGATATATCATAGCACGGTAATAGAAGCTAC
AGCCAACAAGGTATCTATATATAATTAGTGATAGAAGTAGCAGATGATAT
TATGATATTATTCTCCAAAAATTACGTACAAACATTAACATAACGGAAAA
TATGGGGCCCTCCACGGAGGCACCACAACAAACGTCAACGGAGGAAATCC
AAATCCATTCTTTTGTAATGGTAACTCAACCCAGTGTTCCAATTGGAACT
GAAGAAAATGTATGACTATGCCTAGGAAACCCGGTATACTCTCATGGTCT
CCCTTTACAAAGTGACGTTAATTTACTTGTAAGTTCAAATAACTCTCTTT
GGTAACCCTGCCCAGAATTACAATCGGACTTGAAGAAAATGGAGCTATGC
CTAGCTAGAAAAATCTGTATGGAGTACAGTCTCCCTTCACAAAGTGACGT
GACGTTACTTGCCCCGTTGATGGTATTTCTCATTCCACAGAATGTGGAGG
TGACCTGACGGCTACCTTTGGAGGCCCGGTGACGCCACCGAACTATCCCA
GTAATTATGGCAACAATGAGAGATGTGAGTGGTCGATCACTGCACCAGAG
GGAAGCATCATTCGTCTTACGTTCGACAGTTTCAACACTGAGGACGATCA
TGACTTTCTGACCATCTACGATGGAGCCAGTGATAGTGCTGATGAGTTAC
AACGGTAATATGTTCTAAACACTTAAGCAACACTCTGATAAAGGCGTTAC
CGTTTACAGGTGTAACTAGAGATGTGGTGATGACCAATCACTATCATGGG
ATATGCAAGCTGCCTTTCTGCAAGCTTCAATTCATTCTTGATATAGGAAA
TATAACAGACCTAATGCCAGAAAATATTACAACAGTTTGCGTTTCTAACA
TGATCGTTTATTCCTTCCTCTCCAGGTTAACAGGGCAACAGTCAGTCAGC
CCCATCACCAGCACATCTAACACGATGTTCCTGAGGTTTACATCTGACGG
CAGTGCGACGCATCAGGGGTTCCGGTTCTCCTACATAAGTAAGGTTTCAT
GGCACTTCTCGCAGTAAGCACCCTATCATACTGCCAAAATAAAATTTATA
ATGTTTTGGGGATGGGGCTACGTCTCCAGGTTTGTGTGTTTTTAAAAGAG
GTGATGTAGCAGTGACTGTGAGGAAGGAGATTGATAAATTTGTATTGTAT
TTTTTTCTTTCAGGCAGTACCCCAGGCCATTGCTGGGATCCATGTGTACC
AGCCAATGGGAACAGGGATAACAACAGTAACTTCACATCAGGACAGACGG
TCAGGTACACCTGTACGCCCGGGTACCAGCTGTGGGGGACTGCCAATATA
ACCTGCCGGTCGAACGGGACATGGAGTGATGCTACACCAACTTGTGAAGG
TAAGATTAAGATCATTTGTAAGGGTTAG Coding sequence (CDS) from alignment at Sc0000003:4411287..4417814- >Blg00736.0 ID=Blg00736.0|Name=Blg00736.0|organism=Branchiostoma lanceolatum|type=CDS|length=1605bp|location=Sequence derived from alignment at Sc0000003:4411287..4417814- (Branchiostoma lanceolatum)
ATGTTCGTATTTTTATATTCCTCAGGAACCAGCGCGACTGGATGTGGAGG
TAACCTGACGGCTCCCTCTGGAGGCCCTGTGACATCACCGAACTATCCCA
GTAACTATGGCAACAATGAGAGATGTGGGTGGTCGATCACCGTACCAGAG
GGAAGCATCATTCGTCTCACGTTCGACAGTTTCAACACTGAGAAAGGTTA
CGACTTTCTGACCATCTACGATGGAGCCAGTGATAGTGCTGCAGAGTTGC
AACGGTTATCAGGCCCACAGTCAGTTAGTCCTATCACCAGCACATCTAAC
ATGATGTTCCTGAGGTTTACATCTGACTATTCTGAGACTCAACAGGGGTT
CCAGCTGGTCTACATAAGCAGCACTCCAGGCCATTGCTGGGATCCAGGTG
TACCAGCCAATGGGAACAGGGATAACAACAGTAACTTTACATCAGGACAG
ACGGTCAGGTACACCTGTATGGCCGGGTACCAGCTGTGGGGGACTGCCTA
TATAACCTGCCGGTCGAACGGGACATGGAGTGACGCTACACCAACTTGCG
GAGAATGTGGAGGTGACCTGACGGCTACCTCTGGAGGCCCTGTGACGTCA
CCGAACTATCCCAGTAACTATGGCAACAATGAGAGATGTGAGTGGTCGAT
CACTGCACCAGAGGGAAGCATCATTCGTCTCACGTTCGACAGTTTCAACA
CTGAGGACGATTATGACGTTCTGACCATGTACGAAGGAGCCAGTGATAGT
GCTGCAGAGTTACAACGGTTAACAGGGCAGCAGTCAGTCAGCCCTATCAC
CAGCACATCTAACACGATGTACCTGAGGTTTACATCTGACGGTAGTGCGA
CGCATCAGGGGTTCCGGTTCTCCTACATAAGCAGTACCCCAGGCCATTGC
TGGGATCCAGGTGTGCCTGCCAATGGGAACAGGGATAACAACAGTAACTT
TACATCAGAACAGACGGTCAGGTACACCTGTACGCCCGGGTACCAGCTGT
GGGGGACTGCCAACATAACCTGCCAGTCGAACGGGACATGGAGTGACGCT
ACACCAACTTGTGAATGTGGAGGTGACCTGACGGCTACCTTTGGAGGCCC
GGTGACGCCACCGAACTATCCCAGTAATTATGGCAACAATGAGAGATGTG
AGTGGTCGATCACTGCACCAGAGGGAAGCATCATTCGTCTTACGTTCGAC
AGTTTCAACACTGAGGACGATCATGACTTTCTGACCATCTACGATGGAGC
CAGTGATAGTGCTGATGAGTTACAACGGTTAACAGGGCAACAGTCAGTCA
GCCCCATCACCAGCACATCTAACACGATGTTCCTGAGGTTTACATCTGAC
GGCAGTGCGACGCATCAGGGGTTCCGGTTCTCCTACATAAGCAGTACCCC
AGGCCATTGCTGGGATCCATGTGTACCAGCCAATGGGAACAGGGATAACA
ACAGTAACTTCACATCAGGACAGACGGTCAGGTACACCTGTACGCCCGGG
TACCAGCTGTGGGGGACTGCCAATATAACCTGCCGGTCGAACGGGACATG
GAGTGATGCTACACCAACTTGTGAAGGTAAGATTAAGATCATTTGTAAGG
GTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00736.0-exon-Sc0000003-1570713199:4417561..4417814 | Blg00736.0-exon-Sc0000003-1570713199:4417561..4417814 | Branchiostoma lanceolatum | exon |
| Blg00736.0-exon-Sc0000003-1570713199:4417227..4417339 | Blg00736.0-exon-Sc0000003-1570713199:4417227..4417339 | Branchiostoma lanceolatum | exon |
| Blg00736.0-exon-Sc0000003-1570713199:4415409..4415594 | Blg00736.0-exon-Sc0000003-1570713199:4415409..4415594 | Branchiostoma lanceolatum | exon |
| Blg00736.0-exon-Sc0000003-1570713199:4413743..4413956 | Blg00736.0-exon-Sc0000003-1570713199:4413743..4413956 | Branchiostoma lanceolatum | exon |
| Blg00736.0-exon-Sc0000003-1570713199:4413336..4413448 | Blg00736.0-exon-Sc0000003-1570713199:4413336..4413448 | Branchiostoma lanceolatum | exon |
| Blg00736.0-exon-Sc0000003-1570713199:4412978..4413160 | Blg00736.0-exon-Sc0000003-1570713199:4412978..4413160 | Branchiostoma lanceolatum | exon |
| Blg00736.0-exon-Sc0000003-1570713199:4412011..4412224 | Blg00736.0-exon-Sc0000003-1570713199:4412011..4412224 | Branchiostoma lanceolatum | exon |
| Blg00736.0-exon-Sc0000003-1570713199:4411677..4411789 | Blg00736.0-exon-Sc0000003-1570713199:4411677..4411789 | Branchiostoma lanceolatum | exon |
| Blg00736.0-exon-Sc0000003-1570713199:4411287..4411501 | Blg00736.0-exon-Sc0000003-1570713199:4411287..4411501 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:4411287..4417814 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00736 |
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