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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:7433361..7438037- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00685.6 ID=Blg00685.6|Name=Blg00685.6|organism=Branchiostoma lanceolatum|type=mRNA|length=4677bp|location=Sequence derived from alignment at Sc0000003:7433361..7438037- (Branchiostoma lanceolatum)
AAGATTCATCGGGTACGGAGCGCTTGTACATGTGTGTGTGTGTGTCTTGT
CGCACGTAGGCACTGGATATCTGTGCACGTTGAACTAAATTCCCTCAATC
TCCAAGCAGTTATAGGGTCAGGTTCAGTGTTTTACGAGTGCTATAACACG
GACCTTATAAAAATCTGATTAGAAAGAAGACGCCACTAACATCGACCGTA
GCGATTGTTGCAGGGCTTGCTGTCTTTTATATAGCCCGGTAACCTAACAT
AAGTGACTTTTAATTGATGTTGGGGATGAATGTTTCGCAATCGATAATCC
AAGCTTTTTTAAATGCTCATGCGAATAGATTACAAACAGCTAACATTGGC
AAAAACAATTGCTATATTTGGTTCAGAGACTGTGAGTCGACAGAATTGAA
GAACTAAAGTCTTACTGTATGTCGACATTCTATGAGTAGGTAAAAGTAGT
CCCATTGCCTTTTTGAGGCCGTATACCGGGCAGTGGGTTATTAGCCACTG
TGTCTAGGGCACGGCATTGGAAGGCGGAGCCCGACCCCCTTCTCTCCCTT
TTATCTCACCAACTGAAGCAATGTACCCATTTTTACACCTGGGTGGAGTG
GGGACTGGGAACGTCGTGTTGAGTGCATTCATCATCATCATATCGGGCAG
CTTGCCCGGACTAGGGTTGCTCTTTCCCTCCAGTCAACACGGTCCGCCAT
GAGTGCATTACATGACAGGATTCAAACCCAGGACCTCGAGATCTGAGTTC
TGGGCCAAAACACACTGCCCTTACGCCACACGACTTCTGTAAAGAAAAGT
GTATTTTCAATGTCATGTTATTTGTCAAATTTGCAGGCTTACATGTTTGT
TTAATCGTTTGTTTATCATGCATTGACCTGATCTAGAAGTAGGTAATTTT
TTTTTAAAATCAAGCGGTTGTTAGAGTAAAAACATGCTATTAGTACTAAG
CCTCAGAGTGTATTTAGAGGTGCCATTGGTTTTGTGTCAATAGTAGCTGC
CCTCGAGTATGCATTGATATATGCCTTTGGGTTTGCACTGATAGGTGCCT
GGGAACCCATCCTGCCCCCCTGAGGGGTCGGTCTGCCCTGGTGACCGGGT
CTACCAGCGGCATCGGACTGGGGATAGCTCGGGCACTGGCTGAGAGCGGA
TGTGACGTCATCTACACGGGTTTCGCAGACGAAAAACTCTTAGCTGACCT
TCAGGAAGACTTCCGGTTGGTTTGATCACTTACTTGACCTTCTCTTTCTT
TCCCTCCATTTAAATCTGATTTACAATCAAAACATTTACTTTCTATCCAG
ACACGGCATTATGGCTTCATTCAAAGGTTCACGAAGACTTCCGGTTAGTT
GGATCTCTCTCACTCCTTTTATTCGTGCTTCTCTCCATCTCTCTATTCTT
CATCTGAAGGGTATTATATAAATGCGTCATGATCTTTTGATGATATTACA
TTAGAATGAGCTCTAAAATATTTCATGTAGTGTCACATCTTGAACTTGAA
GTTGGTTGCCAGGAGGCCAATGATAAGCCTAAATATCATTCTAGTTCCAG
CGCCCCCATACCCTCACTTTATTTTGTGAAGAGAGAGTATGGGTGCCTAT
ATGGTGCCATGGAACTAATTAGGATGACACTAGGCTAGCCCATTGATAAC
CTTGGCCTTTTTCTTTACATAACCAACCCACAAGCCAAATATTTTTACAA
TCCATCCGACCTTTGCAGAAATTACAACGGTGTAAAAGCCACTTACATGC
CGGCAGATCTGACAAGGCCTACGGAGGTAGAAAGATTGTGTACGGAGACG
AAGAGACACTATACGGACGGGGTGGACATAGTAGTCAATAATGCAGGTAG
GATCATTGTAGTTCTGTAGTGACGTCATCTTTACCTTCGCGTTCAGAGCC
TTTGTTTTCAGTGTCATCATCAGCTCCTTTACATCCTGCCGGACGATCAG
TTCGGCGTCGGTGGACTCGTGTATGTGTTTATTTACTGTAGTTATTTGCG
TACACTCTTATTAGAGAGGCAGGAAGTGAGTGAGTGAGTGGGGAAAATAA
CCTTAAGGTCACTGCAAATGTCAAACTTACGGAAGTAGAGTTCGTAGGTG
ATAGAGCCTGTCGTCAATAAGACATAACAGCCAACCCAGGTCATGGGGTC
ATTCATGTATCATGAATATATCAGATGTCCTAAATACACCTCAACCTGTC
TATCTTAGGATTTCAGCATACGTCACCTATCGAGTCGTTTCCCTTGGCAA
CGTGGGACGCCATGATGGCCGCCATGTTGACCGCACCATTCCTCATAATC
AAGCACCTCCTATCTGCCATGAAGGCAAAAGGTAAACTTGTCCACACCTG
TTTGACTCCTAAGACTATAGGAATATATTTTTTAGGGTTGTAAGATTTAT
TGTACCTAAGGAAGAAAGTTTTGTTGTTGTTGTTCGGTGCAAAACCACTC
TTTGACTTGATCTTTACATTATTTGTAAATCGATCGTGGTATTTCTTTAT
AAGCTCCACCCCTGAGGCGTTGCTAAAATAGATTTTTTTCATTCCCACTT
TTGTTCCAGGATGGGGAAGGATAATCAATATTTCCTCAGCGCACGGGCTT
GTGGCGTCTGTGGAGAAATGTGCGTATGTGTCGGCGAAACACGGCATCAA
TGGACTGACAAAGGTGACTAAGATGAAGTTAACACACTCACTCACACACA
CACACTCTCTCACACACACACACACACACACACACACACACACACACACA
CACACACACACACACACACACACACACACACAATGAAGCTCAAACCCACT
GGATTCAAACCTACTGGCCCGAACATACACAAACACTTGTATTGTGAAGT
ATTTAGCTAGGTAGATTTACGACAAAGTTGTATGTTCTAACATGTATTGT
ATATGTAGTGTTTATGTGTCTGCTTCTGCAAATAACGCTTCATATACCGC
TTTATCCAACAACGCATTTTCTACTTAGACGCTGTCAAATTCGTCATACG
ATCGAAAACTGACATGATAAGTTAAACATTCTTGGGATATTCCTGCATGT
TTTCATGATGCAAAATTCAGCTGTTTTGATCCTCTTCGGCGGTTGGGTAT
GTCACCGCTTTCTTAAAAAACCTGCAACATAAAAACCGTACGACGGCCTA
CGACCGATGTGATTACACTGCAAAGATGCTGTCAAGCATCAACAGGTATG
ATGGTCTGTTTGTAGGTCGTTGCCTTGGAAACGGCAGGGACCGGGGTCAC
GTGCAACGCCGTGTGTCCCGGATGGGTGCTGACACCACGTGAGTACTTCT
GCCTCCCAAAATGGCGGCGTAACGTAATTAGCATTACGCGAGGAAAGTTA
TGTCTATGTTTAACATTATGTCTAAGAAAATATTTTCTACGTGAATTTAA
TCATCATAGGTAGAACCTTAAAATTAGACTTAAGAGGTCAATTCTTTATT
TTCCAGTCGTTGAAAAACAAATCCGACAGTTGATGGAAGATCACAACATA
GCTTGGAAAGACGCACAGGTATCTTGGATTCTTAAAACGAATTCGATAAC
TAGAGAATTTAAATTGTGATAAGCATTAGTATTAAGACAACATTATCTTC
TCGAAGTTTATAAACGAAAGGAGTGTACAACTAACGAAATCAAGCGTTGG
GGATATGCTTGCCATTTCGTCTTTGGAAGTACTTTAACTGCATTCAATTT
CACGATAGTGAGTGTTCGCTAACATCTCTCTCCTTTATGCATGGTATTTC
TTTAAAATGGGTGCTAAATTTCCACTTTCTCCAAGACGATGCTTCTCTCA
AGAAAACAGCCTTCCAATGGCTTCGTGACTCCCGAACAGGTAAGGAAGAG
CAAAACGTTGTTTTTTTAATCTTTTATTTTCCTTTTTGATTCGTAGCCTT
ATTCAGTGCCACATGTTACTTGAAAACGTATTTGAAAAGAGAATATGCAG
TTGACTGCAGTTTACAAATAACCCGCTAGGTACAAAGTAGTATCCAAAAG
AATAGCGTCAAGCAGAAATGTATCAAAATTTAATTCTTTTCCATTTATTT
CAGATTGGAGACATGGTAACCTTTCTTTGCTCCCAAGCAGTCAATCAGAT
GACAGGATCCATCCTTTCCATCGACGGAGGATGGACAGCGCAGTGAAAGG
TCCTCTGTCATTGGTCTAGACCAAGACATAGTCACTCCGCTTCAACATTT
TTCTTGATTTTCAGTGTTCATTTCATTCATTAAAACACAAAAATAAATAC
CTATGGTGGTGCCGTATTCAAGCCACAAACTTATCTTAACGTCAGCAGTA
AAAATATACACAGTTCAATACAATAAAACGATCAAAAGTTGCTCATAATT
CGTCTCGTTATTCATAACATATAAGCTTACCATAACATTACACATAAGAT
ACACATGATACACGTTATTTGCATCCGAAACACATCACAAGGCTTTTGCA
GTCTTATAAACCTTCTTATTTTAATATTCTAACATGTTACTTATCTCAAA
TGTAAAAATATAAAATGACACATCATAACATATATATATCTAGTATGGAT
ATACTCAACAGCTATAGACACAAATGAAATTTAAAACGCTATTAAGGTAG
CAAAACTGAACGTCCAGTTTAACAACAAATACTAATGATACGACCACTGA
AATTACAGTTTTCATAATAAAGAAATG Coding sequence (CDS) from alignment at Sc0000003:7433361..7438037- >Blg00685.6 ID=Blg00685.6|Name=Blg00685.6|organism=Branchiostoma lanceolatum|type=CDS|length=513bp|location=Sequence derived from alignment at Sc0000003:7433361..7438037- (Branchiostoma lanceolatum)
ATGCCGGCAGATCTGACAAGGCCTACGGAGGTAGAAAGATTGTGTACGGA
GACGAAGAGACACTATACGGACGGGGTGGACATAGTAGTCAATAATGCAG
GATTTCAGCATACGTCACCTATCGAGTCGTTTCCCTTGGCAACGTGGGAC
GCCATGATGGCCGCCATGTTGACCGCACCATTCCTCATAATCAAGCACCT
CCTATCTGCCATGAAGGCAAAAGGATGGGGAAGGATAATCAATATTTCCT
CAGCGCACGGGCTTGTGGCGTCTGTGGAGAAATGTGCGTATGTGTCGGCG
AAACACGGCATCAATGGACTGACAAAGGTCGTTGCCTTGGAAACGGCAGG
GACCGGGGTCACGTGCAACGCCGTGTGTCCCGGATGGGTGCTGACACCAC
TCGTTGAAAAACAAATCCGACAGTTGATGGAAGATCACAACATAGCTTGG
AAAGACGCACAGGTATCTTGGATTCTTAAAACGAATTCGATAACTAGAGA
ATTTAAATTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00685.6-exon-Sc0000003-1570713199:7437922..7438037 | Blg00685.6-exon-Sc0000003-1570713199:7437922..7438037 | Branchiostoma lanceolatum | exon |
| Blg00685.6-exon-Sc0000003-1570713199:7436823..7436993 | Blg00685.6-exon-Sc0000003-1570713199:7436823..7436993 | Branchiostoma lanceolatum | exon |
| Blg00685.6-exon-Sc0000003-1570713199:7436192..7436319 | Blg00685.6-exon-Sc0000003-1570713199:7436192..7436319 | Branchiostoma lanceolatum | exon |
| Blg00685.6-exon-Sc0000003-1570713199:7435707..7435829 | Blg00685.6-exon-Sc0000003-1570713199:7435707..7435829 | Branchiostoma lanceolatum | exon |
| Blg00685.6-exon-Sc0000003-1570713199:7435375..7435478 | Blg00685.6-exon-Sc0000003-1570713199:7435375..7435478 | Branchiostoma lanceolatum | exon |
| Blg00685.6-exon-Sc0000003-1570713199:7434750..7434822 | Blg00685.6-exon-Sc0000003-1570713199:7434750..7434822 | Branchiostoma lanceolatum | exon |
| Blg00685.6-exon-Sc0000003-1570713199:7434199..7434581 | Blg00685.6-exon-Sc0000003-1570713199:7434199..7434581 | Branchiostoma lanceolatum | exon |
| Blg00685.6-exon-Sc0000003-1570713199:7433361..7433984 | Blg00685.6-exon-Sc0000003-1570713199:7433361..7433984 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7433361..7438037 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00685 |
|
