|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:7433361..7438301- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00685.3 ID=Blg00685.3|Name=Blg00685.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4941bp|location=Sequence derived from alignment at Sc0000003:7433361..7438301- (Branchiostoma lanceolatum)
TCGATTGTTTGTTGGCATGCAACAAGAGCCATCTAGCGATATCAAGGTTA
AACGCAAGATAGACCGTTTATAGCGTGAAGGAAAGGTAAGCTATGCTAAA
CTCGCTCTATAACATTTGGACCTTGACCCGTGTAACAACAAGAGTCCTTA
CAAAGATGGCGTCCTTTATTCGTATCGCCAAGACATCATCCTTTGCACGA
TATACACGGATAGCCACTGTTACGGCGTTTGCAAGGTAATACGTACAAAC
TTTTCGCCGTTTGGAAGATTCATCGGGTACGGAGCGCTTGTACATGTGTG
TGTGTGTGTCTTGTCGCACGTAGGCACTGGATATCTGTGCACGTTGAACT
AAATTCCCTCAATCTCCAAGCAGTTATAGGGTCAGGTTCAGTGTTTTACG
AGTGCTATAACACGGACCTTATAAAAATCTGATTAGAAAGAAGACGCCAC
TAACATCGACCGTAGCGATTGTTGCAGGGCTTGCTGTCTTTTATATAGCC
CGGTAACCTAACATAAGTGACTTTTAATTGATGTTGGGGATGAATGTTTC
GCAATCGATAATCCAAGCTTTTTTAAATGCTCATGCGAATAGATTACAAA
CAGCTAACATTGGCAAAAACAATTGCTATATTTGGTTCAGAGACTGTGAG
TCGACAGAATTGAAGAACTAAAGTCTTACTGTATGTCGACATTCTATGAG
TAGGTAAAAGTAGTCCCATTGCCTTTTTGAGGCCGTATACCGGGCAGTGG
GTTATTAGCCACTGTGTCTAGGGCACGGCATTGGAAGGCGGAGCCCGACC
CCCTTCTCTCCCTTTTATCTCACCAACTGAAGCAATGTACCCATTTTTAC
ACCTGGGTGGAGTGGGGACTGGGAACGTCGTGTTGAGTGCATTCATCATC
ATCATATCGGGCAGCTTGCCCGGACTAGGGTTGCTCTTTCCCTCCAGTCA
ACACGGTCCGCCATGAGTGCATTACATGACAGGATTCAAACCCAGGACCT
CGAGATCTGAGTTCTGGGCCAAAACACACTGCCCTTACGCCACACGACTT
CTGTAAAGAAAAGTGTATTTTCAATGTCATGTTATTTGTCAAATTTGCAG
GCTTACATGTTTGTTTAATCGTTTGTTTATCATGCATTGACCTGATCTAG
AAGTAGGTAATTTTTTTTTAAAATCAAGCGGTTGTTAGAGTAAAAACATG
CTATTAGTACTAAGCCTCAGAGTGTATTTAGAGGTGCCATTGGTTTTGTG
TCAATAGTAGCTGCCCTCGAGTATGCATTGATATATGCCTTTGGGTTTGC
ACTGATAGGTGCCTGGGAACCCATCCTGCCCCCCTGAGGGGTCGGTCTGC
CCTGGTGACCGGGTCTACCAGCGGCATCGGACTGGGGATAGCTCGGGCAC
TGGCTGAGAGCGGATGTGACGTCATCTACACGGGTTTCGCAGACGAAAAA
CTCTTAGCTGACCTTCAGGAAGACTTCCGGTTGGTTTGATCACTTACTTG
ACCTTCTCTTTCTTTCCCTCCATTTAAATCTGATTTACAATCAAAACATT
TACTTTCTATCCAGACACGGCATTATGGCTTCATTCAAAGGTTCACGAAG
ACTTCCGGTTAGTTGGATCTCTCTCACTCCTTTTATTCGTGCTTCTCTCC
ATCTCTCTATTCTTCATCTGAAGGGTATTATATAAATGCGTCATGATCTT
TTGATGATATTACATTAGAATGAGCTCTAAAATATTTCATGTAGTGTCAC
ATCTTGAACTTGAAGTTGGTTGCCAGGAGGCCAATGATAAGCCTAAATAT
CATTCTAGTTCCAGCGCCCCCATACCCTCACTTTATTTTGTGAAGAGAGA
GTATGGGTGCCTATATGGTGCCATGGAACTAATTAGGATGACACTAGGCT
AGCCCATTGATAACCTTGGCCTTTTTCTTTACATAACCAACCCACAAGCC
AAATATTTTTACAATCCATCCGACCTTTGCAGAAATTACAACGGTGTAAA
AGCCACTTACATGCCGGCAGATCTGACAAGGCCTACGGAGGTAGAAAGAT
TGTGTACGGAGACGAAGAGACACTATACGGACGGGGTGGACATAGTAGTC
AATAATGCAGGTAGGATCATTGTAGTTCTGTAGTGACGTCATCTTTACCT
TCGCGTTCAGAGCCTTTGTTTTCAGTGTCATCATCAGCTCCTTTACATCC
TGCCGGACGATCAGTTCGGCGTCGGTGGACTCGTGTATGTGTTTATTTAC
TGTAGTTATTTGCGTACACTCTTATTAGAGAGGCAGGAAGTGAGTGAGTG
AGTGGGGAAAATAACCTTAAGGTCACTGCAAATGTCAAACTTACGGAAGT
AGAGTTCGTAGGTGATAGAGCCTGTCGTCAATAAGACATAACAGCCAACC
CAGGTCATGGGGTCATTCATGTATCATGAATATATCAGATGTCCTAAATA
CACCTCAACCTGTCTATCTTAGGATTTCAGCATACGTCACCTATCGAGTC
GTTTCCCTTGGCAACGTGGGACGCCATGATGGCCGCCATGTTGACCGCAC
CATTCCTCATAATCAAGCACCTCCTATCTGCCATGAAGGCAAAAGGTAAA
CTTGTCCACACCTGTTTGACTCCTAAGACTATAGGAATATATTTTTTAGG
GTTGTAAGATTTATTGTACCTAAGGAAGAAAGTTTTGTTGTTGTTGTTCG
GTGCAAAACCACTCTTTGACTTGATCTTTACATTATTTGTAAATCGATCG
TGGTATTTCTTTATAAGCTCCACCCCTGAGGCGTTGCTAAAATAGATTTT
TTTCATTCCCACTTTTGTTCCAGGATGGGGAAGGATAATCAATATTTCCT
CAGCGCACGGGCTTGTGGCGTCTGTGGAGAAATGTGCGTATGTGTCGGCG
AAACACGGCATCAATGGACTGACAAAGGTGACTAAGATGAAGTTAACACA
CTCACTCACACACACACACTCTCTCACACACACACACACACACACACACA
CACACACACACACACACACACACACACACACACACACACACACACAATGA
AGCTCAAACCCACTGGATTCAAACCTACTGGCCCGAACATACACAAACAC
TTGTATTGTGAAGTATTTAGCTAGGTAGATTTACGACAAAGTTGTATGTT
CTAACATGTATTGTATATGTAGTGTTTATGTGTCTGCTTCTGCAAATAAC
GCTTCATATACCGCTTTATCCAACAACGCATTTTCTACTTAGACGCTGTC
AAATTCGTCATACGATCGAAAACTGACATGATAAGTTAAACATTCTTGGG
ATATTCCTGCATGTTTTCATGATGCAAAATTCAGCTGTTTTGATCCTCTT
CGGCGGTTGGGTATGTCACCGCTTTCTTAAAAAACCTGCAACATAAAAAC
CGTACGACGGCCTACGACCGATGTGATTACACTGCAAAGATGCTGTCAAG
CATCAACAGGTATGATGGTCTGTTTGTAGGTCGTTGCCTTGGAAACGGCA
GGGACCGGGGTCACGTGCAACGCCGTGTGTCCCGGATGGGTGCTGACACC
ACGTGAGTACTTCTGCCTCCCAAAATGGCGGCGTAACGTAATTAGCATTA
CGCGAGGAAAGTTATGTCTATGTTTAACATTATGTCTAAGAAAATATTTT
CTACGTGAATTTAATCATCATAGGTAGAACCTTAAAATTAGACTTAAGAG
GTCAATTCTTTATTTTCCAGTCGTTGAAAAACAAATCCGACAGTTGATGG
AAGATCACAACATAGCTTGGAAAGACGCACAGGTATCTTGGATTCTTAAA
ACGAATTCGATAACTAGAGAATTTAAATTGTGATAAGCATTAGTATTAAG
ACAACATTATCTTCTCGAAGTTTATAAACGAAAGGAGTGTACAACTAACG
AAATCAAGCGTTGGGGATATGCTTGCCATTTCGTCTTTGGAAGTACTTTA
ACTGCATTCAATTTCACGATAGTGAGTGTTCGCTAACATCTCTCTCCTTT
ATGCATGGTATTTCTTTAAAATGGGTGCTAAATTTCCACTTTCTCCAAGA
CGATGCTTCTCTCAAGAAAACAGCCTTCCAATGGCTTCGTGACTCCCGAA
CAGGTAAGGAAGAGCAAAACGTTGTTTTTTTAATCTTTTATTTTCCTTTT
TGATTCGTAGCCTTATTCAGTGCCACATGTTACTTGAAAACGTATTTGAA
AAGAGAATATGCAGTTGACTGCAGTTTACAAATAACCCGCTAGGTACAAA
GTAGTATCCAAAAGAATAGCGTCAAGCAGAAATGTATCAAAATTTAATTC
TTTTCCATTTATTTCAGATTGGAGACATGGTAACCTTTCTTTGCTCCCAA
GCAGTCAATCAGATGACAGGATCCATCCTTTCCATCGACGGAGGATGGAC
AGCGCAGTGAAAGGTCCTCTGTCATTGGTCTAGACCAAGACATAGTCACT
CCGCTTCAACATTTTTCTTGATTTTCAGTGTTCATTTCATTCATTAAAAC
ACAAAAATAAATACCTATGGTGGTGCCGTATTCAAGCCACAAACTTATCT
TAACGTCAGCAGTAAAAATATACACAGTTCAATACAATAAAACGATCAAA
AGTTGCTCATAATTCGTCTCGTTATTCATAACATATAAGCTTACCATAAC
ATTACACATAAGATACACATGATACACGTTATTTGCATCCGAAACACATC
ACAAGGCTTTTGCAGTCTTATAAACCTTCTTATTTTAATATTCTAACATG
TTACTTATCTCAAATGTAAAAATATAAAATGACACATCATAACATATATA
TATCTAGTATGGATATACTCAACAGCTATAGACACAAATGAAATTTAAAA
CGCTATTAAGGTAGCAAAACTGAACGTCCAGTTTAACAACAAATACTAAT
GATACGACCACTGAAATTACAGTTTTCATAATAAAGAAATG Coding sequence (CDS) from alignment at Sc0000003:7433361..7438301- >Blg00685.3 ID=Blg00685.3|Name=Blg00685.3|organism=Branchiostoma lanceolatum|type=CDS|length=951bp|location=Sequence derived from alignment at Sc0000003:7433361..7438301- (Branchiostoma lanceolatum)
ATGCTAAACTCGCTCTATAACATTTGGACCTTGACCCGTGTAACAACAAG
AGTCCTTACAAAGATGGCGTCCTTTATTCGTATCGCCAAGACATCATCCT
TTGCACGATATACACGGATAGCCACTGTTACGGCGTTTGCAAGGTGCCTG
GGAACCCATCCTGCCCCCCTGAGGGGTCGGTCTGCCCTGGTGACCGGGTC
TACCAGCGGCATCGGACTGGGGATAGCTCGGGCACTGGCTGAGAGCGGAT
GTGACGTCATCTACACGGGTTTCGCAGACGAAAAACTCTTAGCTGACCTT
CAGGAAGACTTCCGAAATTACAACGGTGTAAAAGCCACTTACATGCCGGC
AGATCTGACAAGGCCTACGGAGGTAGAAAGATTGTGTACGGAGACGAAGA
GACACTATACGGACGGGGTGGACATAGTAGTCAATAATGCAGGATTTCAG
CATACGTCACCTATCGAGTCGTTTCCCTTGGCAACGTGGGACGCCATGAT
GGCCGCCATGTTGACCGCACCATTCCTCATAATCAAGCACCTCCTATCTG
CCATGAAGGCAAAAGGATGGGGAAGGATAATCAATATTTCCTCAGCGCAC
GGGCTTGTGGCGTCTGTGGAGAAATGTGCGTATGTGTCGGCGAAACACGG
CATCAATGGACTGACAAAGGTCGTTGCCTTGGAAACGGCAGGGACCGGGG
TCACGTGCAACGCCGTGTGTCCCGGATGGGTGCTGACACCACTCGTTGAA
AAACAAATCCGACAGTTGATGGAAGATCACAACATAGCTTGGAAAGACGC
ACAGACGATGCTTCTCTCAAGAAAACAGCCTTCCAATGGCTTCGTGACTC
CCGAACAGATTGGAGACATGGTAACCTTTCTTTGCTCCCAAGCAGTCAAT
CAGATGACAGGATCCATCCTTTCCATCGACGGAGGATGGACAGCGCAGTG
A
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00685.3-exon-Sc0000003-1570713199:7438067..7438301 | Blg00685.3-exon-Sc0000003-1570713199:7438067..7438301 | Branchiostoma lanceolatum | exon |
| Blg00685.3-exon-Sc0000003-1570713199:7436823..7436993 | Blg00685.3-exon-Sc0000003-1570713199:7436823..7436993 | Branchiostoma lanceolatum | exon |
| Blg00685.3-exon-Sc0000003-1570713199:7436192..7436319 | Blg00685.3-exon-Sc0000003-1570713199:7436192..7436319 | Branchiostoma lanceolatum | exon |
| Blg00685.3-exon-Sc0000003-1570713199:7435707..7435829 | Blg00685.3-exon-Sc0000003-1570713199:7435707..7435829 | Branchiostoma lanceolatum | exon |
| Blg00685.3-exon-Sc0000003-1570713199:7435375..7435478 | Blg00685.3-exon-Sc0000003-1570713199:7435375..7435478 | Branchiostoma lanceolatum | exon |
| Blg00685.3-exon-Sc0000003-1570713199:7434750..7434822 | Blg00685.3-exon-Sc0000003-1570713199:7434750..7434822 | Branchiostoma lanceolatum | exon |
| Blg00685.3-exon-Sc0000003-1570713199:7434520..7434581 | Blg00685.3-exon-Sc0000003-1570713199:7434520..7434581 | Branchiostoma lanceolatum | exon |
| Blg00685.3-exon-Sc0000003-1570713199:7434199..7434252 | Blg00685.3-exon-Sc0000003-1570713199:7434199..7434252 | Branchiostoma lanceolatum | exon |
| Blg00685.3-exon-Sc0000003-1570713199:7433361..7433984 | Blg00685.3-exon-Sc0000003-1570713199:7433361..7433984 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7433361..7438301 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00685 |
|
