Blg00659.4 (mRNA) - B. lanceolatum

Overview
NameBlg00659.4
Unique NameBlg00659.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:4646617..4649621-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00659.4 ID=Blg00659.4|Name=Blg00659.4|organism=Branchiostoma lanceolatum|type=mRNA|length=3005bp|location=Sequence derived from alignment at Sc0000003:4646617..4649621- (Branchiostoma lanceolatum)
ATGTTGACGCAGGCTTTCGGGTTTACACAGAGGTAAGGCCTGAGTCAACA CAGTAATCTGAATCGGTCTCTTCAGTAGTTGATTCCGAGGTGTGCCTTTC CCACCAGTACAGGGTAATGAGGTCAGAACGGATCGACTGATCACCATACT GATATGAGAGAAGCACCCTTCCCCATCTTTATCATTAGGGACAAGGCACC CTTTCCACTAGACGGCGATTACTGAGCGACCGTACAGCGATCAATTTCTT CTTTCGTGTGACCCTTGCTTTCATACAACATGCTGCAAAGCATAAGCTGT GCTTTCCAGCCATTCAAACTCACAGGCTATTCTTTTGCAACGCGTAACTT AATTTTTCTAGTGGTTGTGGTATGAACTGCAGCATATACATTGTATAGCT TGGTCGATACGCCTAGCGGTTAATTACGGCACTACAAGTGTACGATGATA ATCATTGGTCATTGAGAGACACAAGGAAGGCTTAAGCCTCCACAGCCCAA TACATATACATATACATATACATATACATATACATATACATATACATATA CATATACATATACATATACATATACATATAGCTATAGAAGCACCATGGGT CACCCCTACTCTACTCGATAAGTATGTTACAATTGGGTTGCTTAATTCGG TAACTGACGACAGAATCTCGCTCACATGACCGAAGGCTTAAATTCGAAAG CTTCATTAAAGACGATCTGATTGCTAATAGCTGTGTTTGTTTTTTCCGTG CAGAGTCCACCTACACAACAGACACGGTGGTAGACGGGGAGACCATCCAT CTAGAGATACTCGACACAGCGAGAAAGGTACATGTTATCTAATGGCAGAA AGCAAACAACATACTTCATATCTTGTATTTCACAATCCGACAAAGGAGTC AGCCTTCTCACCGAAATGAATGGCGCAATTAACAATGACGGAAGACCTCA ATTTCTAATGATGGGTCTACGACAGTTCTGCCTACTCAAGGTTTAATCAT GTTAGATCCTTGTAGAAAAGCCTTTGATTATATGTCCTTGCTTGTTTGCT TTAAAGGTTAACAAATTCTCTCTGTTTAGCATCAAAATGAGAAGGTCAGC CTGGACGCTTCCATCAAATGGGGAGACGGTTTCGTCATCATGTACTCGGT GACGGACAGGGAGAGTTTCTCGGCCGTTAAGCGGATCAAGCGGCTGATAG ACGCCGCGAAGGAGACTCTGGGCATCCCGGTCATCATCGTGGCCAACAAA CGGGACCTGGAGCGGAGCAGGGCCGTCAGGTGCGCCGAGGGACAGGAGCT GGCCGGGGAACTGTCCTGTCCTTTCTTTGAGGTTTGTTTGTTTGTTTTGT TTGTTTGTCTATTTGCTAACAAGCAGGACATGGAGCGGAGCAGCAGAGCT GGCAGGGAAACTGTGCATGTCCTGCCTGTTCCCTGAGGTTTGTTTGTTTG CAATTGTTTGACTTCTTATTTATTCATGAAAAACTCAAAGTCAACGAGTG AACAGAAGTTGATTAGTACACAGAATTGTTCTCATTCCGTAACCAAGTCT ACATAACCAGCATAGCTTTGTAGGTATGTACTTGACATATCGTTTTATAA TCCGGCGTCCAGATTTCTATTGTTTAAGCGGATGAACAGTTAGGGAAAAG GCCAAAGTTGTTAAAGGAAAGCGGATGATAGCCACACATTACCATATAAA CTACTCATTATGTTAAAAAAATGATGTGTTCATTGATATATGAAATGTAG GTGGCGCTTCAACGGGCCGCCAGGGTGTTACATGGGCTCCTCGCGCGGCG CTTGAAGATTTATCTATTTCATGTCAACTAGTGTTTTGAAAAGTCTTAAA ACTTATTCTCAATTCATTTGAAGATGTCTGGACCTATTTGGGAAAGTATG TATTGGCTGTAAGCCTAATGTCTTGTGCATTTTCGTGTTTTTACAAGTCG CGACCATATACCCCAATAGAGCTTTATCTGCAGTACCGCTCCCGGCCGCG ACCAGAAAAGTACCGAAGACGACCTCCAAATTGCCAAATTTCAGCCTTTT CGGGAATGGGGAAGTTGCGAAAGGCTCGCAAAGGGTTCAACTTTTTAAGG CTTATGTGACTTTGATTTCCAGCAACTGACTATTCAAAATGTATAGATTC GATAATCTAGGCTGTTTACAAACAAAACTACCTGATATTAGTAAAAAACG GTATGTTTCCCTCGCATTTACCAATAGTAGTGCCGAGTGAACATATCCTG TAGACTGTACTGTTCTGAAGGGCTACTACATCCTATTTGATGAAATGAAA AGACGTTGAACAAATTCTACGGTGTTTTGGTCTGCTTTTCTATCAATAGA TCCAGTTTTCCTTCCAAAATGTTGCAAGGAGTGTGGATTACTTAACGGTG CAATATGACGTTGGTCGCCAGGAGACTGAATTTTTTGTTACACCATTTTC TGAAACAAGACAACCTACCTCTTGGTGAAATATTATATTCATTTACTGTA TGTCTTTAATTGTTGCTTTGAGGCGCTTTGTCGGACTTTCTATTTTGACC TGTTGTCCCGCCAACCCATACATATAGGTTTGTGACATAAAGAAAACGGG ACAAAATAGAAAGCCCGACAAAACGCCTAAAACACGTCAAAAAACAGCCG GACCCACTCCTCTGTTTGACTCGGGTTTGAGTAACGAAAATTAAAGTTTG TTCACATTCTTCTATAGATCTCCGTGGCGGATGGATACGACAGCGTTGCC AGTGTGTTCAGCAGATTAATCCGCGAGGTGAAGTGTGAGTTCCTGAAGCA TCTAGAGGCCATGGAGAAACGCTCCAAGATTCTCAACATGAGGAACGTTC TCTTCAGGCGCAGGCGCAGTAAGACACAATGATGACGTCACCAACTTCCC TGACGTCACGAGTGGATGTTTCAACATGAGGAACGTTCTCTTCAGGCGCA GGCGCAGTAAGACACAGTGATGACGTCACCAGCTTCCCTGACGTCACGAG TGGAT

Coding sequence (CDS) from alignment at Sc0000003:4646617..4649621-

>Blg00659.4 ID=Blg00659.4|Name=Blg00659.4|organism=Branchiostoma lanceolatum|type=CDS|length=531bp|location=Sequence derived from alignment at Sc0000003:4646617..4649621- (Branchiostoma lanceolatum)
ATGTTGACGCAGGCTTTCGGGTTTACACAGAGTGGTTGTGAGTCCACCTA
CACAACAGACACGGTGGTAGACGGGGAGACCATCCATCTAGAGATACTCG
ACACAGCGAGAAAGCATCAAAATGAGAAGGTCAGCCTGGACGCTTCCATC
AAATGGGGAGACGGTTTCGTCATCATGTACTCGGTGACGGACAGGGAGAG
TTTCTCGGCCGTTAAGCGGATCAAGCGGCTGATAGACGCCGCGAAGGAGA
CTCTGGGCATCCCGGTCATCATCGTGGCCAACAAACGGGACCTGGAGCGG
AGCAGGGCCGTCAGGTGCGCCGAGGGACAGGAGCTGGCCGGGGAACTGTC
CTGTCCTTTCTTTGAGATCTCCGTGGCGGATGGATACGACAGCGTTGCCA
GTGTGTTCAGCAGATTAATCCGCGAGGTGAAGTGTGAGTTCCTGAAGCAT
CTAGAGGCCATGGAGAAACGCTCCAAGATTCTCAACATGAGGAACGTTCT
CTTCAGGCGCAGGCGCAGTAAGACACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00659.4Blg00659.4-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00659.4-exon-Sc0000003-1570713199:4649590..4649621Blg00659.4-exon-Sc0000003-1570713199:4649590..4649621Branchiostoma lanceolatumexon
Blg00659.4-exon-Sc0000003-1570713199:4649253..4649260Blg00659.4-exon-Sc0000003-1570713199:4649253..4649260Branchiostoma lanceolatumexon
Blg00659.4-exon-Sc0000003-1570713199:4648795..4648868Blg00659.4-exon-Sc0000003-1570713199:4648795..4648868Branchiostoma lanceolatumexon
Blg00659.4-exon-Sc0000003-1570713199:4648291..4648542Blg00659.4-exon-Sc0000003-1570713199:4648291..4648542Branchiostoma lanceolatumexon
Blg00659.4-exon-Sc0000003-1570713199:4646617..4646904Blg00659.4-exon-Sc0000003-1570713199:4646617..4646904Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:4646617..4649621 -
Properties
Property NameValue
GeneIDBlg00659