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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:2532949..2537065- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00646.0 ID=Blg00646.0|Name=Blg00646.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4117bp|location=Sequence derived from alignment at Sc0000003:2532949..2537065- (Branchiostoma lanceolatum)
ATGACGTCCACGGAGGCCTCAGCTCTGGCGTCAGCGCGACGGCGCGCTCT
GACGGTAGCCGTCAGCGCTCTGTGTACGGAGGGAGGATTCGGGACGGCAG
AGAACGCGGCACTGGAGAGCTTAACAGAGATGTTGCAGAGTTGTGAGTTT
AAAGTTTAAGTGTTTCAAATTGTCTGTACAGGGCGCGAAATTAATAATAA
GTAATAGATGCACAGAAAGAATTTTGGGTGCACAACATAGAATAAAGTTG
AATGTCAGGAAAATGTATTTACAAACCCTAGGTACTGCCTGTCACCCAAG
AAATTTGAAATCTCAAACTCGTAGTTTCAAAATTCTTAACAAGCTCAAGT
AATATACTTTAATTTCAAGAATATTCTACATTTAGTACATCTATGCAATA
GCCTACAAAAATATCTAACTGCACCCACAGTCAAAAAGTGGGTGCACAGC
TCCTACTAGCCACTCAGCTATTTAACGCCACTATCTCACTGTTTATTGGT
CATTGGTCAGAAATCACCCATGCAATGGCAGCCAGTACTGAATTGCTGCA
GGGTTTACAATCACATGTACATAATACAGATACATATTTGCTCCACACTT
GCACTTTGTGGAACTGTCGCAAGGGTCTAGGAGGCTGCCATTCGGCGCCA
GCAAGTGACCTTCCCCAACTGAAGTCAGGTACCCATTCACACCACTGTCT
CACTGTGACTATTGAACTGTTTGTCTGCAGATATCACAGAGATGGGCAGG
AGTGCAAAGCAGTACTGTGAACTGGCAGGCCGGACTGAGCCCATGCTGAC
AGATGTCACCGTGTCCCTCATAGAAATGGGTAACAACTTATCTTCTTAGC
ATGAAAGTTCATCTAAGTACATCATAAGAAATAAACTGTTCTCCTACTCA
AAAATTTCACCGGAATTTTCGACAGAATCACTCGGTCTTCATCAGCTATC
TGACCCAAGTGCTGTTGACACTAAAGACCCAGTGATTTGGTAAAATTCTG
GGGAGTGAAGTCTTTTCACTTGGAGAACAGTTTATTTCTCATTGAGTTGT
CTTCTTCTTATATAAGGTTTTTCTACTGCAAAGGCATAGATAAAAGTTAA
CCTTTTCTACATCTATAGGCAAAAGATTCAAACTTGTAACTGATTTGGGC
TCATCTCTGCAGTTTGTTTCTGTTAGAAGTCAATAAAAAGAGACAAAACA
AGAAATGTCAATCCATACATGTTACTTGTATACAACTTAGAAGCAAGCTT
TTCTTGGAGAACATTAAAATGTGATTTGATTTGATTTGCAAAGGTATTGA
TTAAGTTATTAAAGATTGTTTTGTTGACTGTTTTATCCATATTCATTTTT
AGGGGCAGATATAGAAGGCCTACCAGCGTATGCCAGGAGAGCGAATCGTC
TTACTATGACTGCTCGTAAGTTGTTTTGATTTCTGTTGAATACTTTTGAG
TTATCAGAATGTTATTGAACTGTAGAGCTTAAACTTTAAGTTAAAGGTAA
AAAAGTCATTCTCGTTCGATTTACAGCTAGATGCTTTTTCAAGTAGCCTG
TAGTGTAAGGTACATGTAGCTTTGTTAATGCCATGGCTCACAGTTTGAGT
GTGTTTTATTGTAGCCACTTTTGCATCAAGAATCTTGTCTAGTGACCACC
TGTCTACTATGACCATTTCCTTTAAGTCCCTTGAGTGGTCAGTATAGACA
GGTTTGACTGTATCTGGTTGTTTCTGTCCCCCTTTCAGAGCCCCAGGCCA
GGACCCCGGGAAACCCCAAAGTTCTCCAGACAGGGACCAAGAAGCCGCAC
CCGTCTTACGTACCTGAACACCTGCCTGCCTTCCCCGATCCTCACACCTA
CATCAGAACACCTGTAAGTTTTGTATCCTTCAAATGTACATGTACCATTT
CCCGTTGTTGATATATCATATGTGACTTTTGTTATTCTTTATATCTTCAT
TAATCGGTCAAGTGTTGGTTTGAAACTTTGATATATATTACATACTTTCT
GTGAACAAACATCTGTCATCACAGTCCAGTACAGTAACCCAAAACATGTG
AGTGGCTCTTAATAAGTCTTATGAGCCTGATTTTGTGGTGAAATTGAAAT
GTTAGAAATAACATCCGTTCCCCTTCTACTACAGAATTACGTCCCTGTGA
AAATAAATGAATTTACCGTACTTTATTCATACTAGGTGCAAGTGGATTTA
CACTTCCTGCTCTTTTTACAAATGTAGTTATTAGAATATTCTTCAACTGG
TAATCACAGGTGACTGATGAATCTCTTAACGATATCCTGCTTTTTTTGTT
TGTTTGTTTTCTAATTGTTTATGTGTTTTCAGACCTTCCGTCCTCCCGCA
AGTGACTACCAGGTAATCCGAGAGACGGCAGCGTCGCAGAGAAGAGACAT
CGAGCGTGCCCTGACAAGATTCATCGCCAAAACCGGTGACACGCAGAGCC
TGTTTAAAGACGACAAGAACTCCTTTCCACGTCAGTACCTTAATGTTTGT
ATATAGTATCAGATTCTGTATCTGTATAGCCTGAGTGTACAATTGCCTTC
AGCGAAACACACCACTCACAGGTGTGCGGTGTTGCACCAATAGGTAAATA
AAATGTAGTCCCCTAGCCTTTTTGAGGCCGTAGGGGCAGTGGGTTGTGTC
TAGGGCACTAGGGTATTTGAAGGCAGAGCCCAACCCTCTCCTCCCACTGC
ATTTTACTTCCCCAAAAAAGTCAGGTTTTTACACCTGGGTGGAGTGAGGA
AAGTCGTGTTGAGTGCCTTTCCTAAGGGCACAATATCGGTTGCCCTGGAC
TTTCATGTACAAAAAGTACATGTAAAATTGTCTATGGTAGTTTGGTAATA
CAAATATGTAGTGGTTCCTTAATTTACTTGATCATCCTTACATTTTTCTT
CTATGCTATTATAAGTGTGAAATGTAATGTTTATTCATTGTTTGTTTGTT
TGTTTGTTTCCATAGTGATAGCTCCGCAGCCCCTCCCTGCCCCGTACCTG
CTGTCCCTGGTGGGATCAGACATGGACGTTACAGATGAGACCAGCGATGA
AGAATCCATGGAGACAACAAGCAGCTCACAACAACAGGTACGGCAGTGCT
TCTTCCTCTTGTCCTTCTGGGGTTTTGAGGGTACCAACTTCAACTTGCTG
AAGAATCTGTAGTTGACTGTAAGGTTTGAACCTTCGCACACAGGGGCATG
CCCCTACTCTTTTTCGAAAGGTTTGGTGGGTTCTTTGAGGTGCGTGGGAT
GTCGCTCCTCTCAAACTCGGGACCTCCGATCCATTTAACGCGTAAACTAG
TAATGAAGAATCCATTAATACAACAACTCACAACAACAGGTCGGCTACAA
CTGTCTGATTAAGTACTTCATAGGGCCAGTTATTTGGCCCTAATATAAGT
ACACCTCAAAGAAGAAGTAGAAGGATTCCAATGATATGTTGATGAAGGTT
AGACATCCAGGTAATAAGATACGCCAAAAATAATTACTCAAGCAACTGGA
TAAGATTTTGAAACAGACGTTTCAGATAGCAACCGCTATCTTTCGTCAGT
GACTAAAGAAGGATCTGGTAGAACTGGGTTTTATACCAAAACTCTGAATA
GATATGTTAATGAAGGGAAGACAATTTCAGATGGTTTAATACAATAATAG
GATAGTAAGTGAGTTAAAGTTAAGACAAGGTTGCATGCTAATGAATCAAT
TAGCTCCTGTTGGATTCCAATGTTTGGACCTTTCAACCCCAAATCATAAT
AATTGTTATTACTGAATGCTGCTGATGTATTAGCAACATGCTTGAAATTG
CTACAAATAACTTCTTCCTTAGTGGCAGAGGCTGCATAGATATAGTTGAT
TATGTTTATCTAACTTAGGCCCACTTTACACTTGCCACGTTTGAGGCATG
TTGGCTTACATGAAAATTGTTGTTGTTTTAGACCGTGCCTTCCCAGACAG
CGGGTACCAGGGAAAGTAAAGACGGTTCAGGGGAAGGGAAGGGTGAAGAC
TCCTCACAAGACTTGTCTCAAGATCAGCGGAACAGAGACTCAGACTCCAT
CATTGATAATCCATTCCTACAGCCGGCCAGGAAACCACCGTTCAGGAGAA
AACTCTCAGCAAAGTAA Coding sequence (CDS) from alignment at Sc0000003:2532949..2537065- >Blg00646.0 ID=Blg00646.0|Name=Blg00646.0|organism=Branchiostoma lanceolatum|type=CDS|length=885bp|location=Sequence derived from alignment at Sc0000003:2532949..2537065- (Branchiostoma lanceolatum)
ATGACGTCCACGGAGGCCTCAGCTCTGGCGTCAGCGCGACGGCGCGCTCT
GACGGTAGCCGTCAGCGCTCTGTGTACGGAGGGAGGATTCGGGACGGCAG
AGAACGCGGCACTGGAGAGCTTAACAGAGATGTTGCAGAGTTATATCACA
GAGATGGGCAGGAGTGCAAAGCAGTACTGTGAACTGGCAGGCCGGACTGA
GCCCATGCTGACAGATGTCACCGTGTCCCTCATAGAAATGGGGGCAGATA
TAGAAGGCCTACCAGCGTATGCCAGGAGAGCGAATCGTCTTACTATGACT
GCTCAGCCCCAGGCCAGGACCCCGGGAAACCCCAAAGTTCTCCAGACAGG
GACCAAGAAGCCGCACCCGTCTTACGTACCTGAACACCTGCCTGCCTTCC
CCGATCCTCACACCTACATCAGAACACCTACCTTCCGTCCTCCCGCAAGT
GACTACCAGGTAATCCGAGAGACGGCAGCGTCGCAGAGAAGAGACATCGA
GCGTGCCCTGACAAGATTCATCGCCAAAACCGGTGACACGCAGAGCCTGT
TTAAAGACGACAAGAACTCCTTTCCACTGATAGCTCCGCAGCCCCTCCCT
GCCCCGTACCTGCTGTCCCTGGTGGGATCAGACATGGACGTTACAGATGA
GACCAGCGATGAAGAATCCATGGAGACAACAAGCAGCTCACAACAACAGA
CCGTGCCTTCCCAGACAGCGGGTACCAGGGAAAGTAAAGACGGTTCAGGG
GAAGGGAAGGGTGAAGACTCCTCACAAGACTTGTCTCAAGATCAGCGGAA
CAGAGACTCAGACTCCATCATTGATAATCCATTCCTACAGCCGGCCAGGA
AACCACCGTTCAGGAGAAAACTCTCAGCAAAGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00646.0-exon-Sc0000003-1570713199:2536924..2537065 | Blg00646.0-exon-Sc0000003-1570713199:2536924..2537065 | Branchiostoma lanceolatum | exon |
| Blg00646.0-exon-Sc0000003-1570713199:2536237..2536335 | Blg00646.0-exon-Sc0000003-1570713199:2536237..2536335 | Branchiostoma lanceolatum | exon |
| Blg00646.0-exon-Sc0000003-1570713199:2535651..2535713 | Blg00646.0-exon-Sc0000003-1570713199:2535651..2535713 | Branchiostoma lanceolatum | exon |
| Blg00646.0-exon-Sc0000003-1570713199:2535203..2535327 | Blg00646.0-exon-Sc0000003-1570713199:2535203..2535327 | Branchiostoma lanceolatum | exon |
| Blg00646.0-exon-Sc0000003-1570713199:2534586..2534733 | Blg00646.0-exon-Sc0000003-1570713199:2534586..2534733 | Branchiostoma lanceolatum | exon |
| Blg00646.0-exon-Sc0000003-1570713199:2533979..2534100 | Blg00646.0-exon-Sc0000003-1570713199:2533979..2534100 | Branchiostoma lanceolatum | exon |
| Blg00646.0-exon-Sc0000003-1570713199:2532949..2533134 | Blg00646.0-exon-Sc0000003-1570713199:2532949..2533134 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:2532949..2537065 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00646 |
|
