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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:4989021..4996995+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00644.4 ID=Blg00644.4|Name=Blg00644.4|organism=Branchiostoma lanceolatum|type=mRNA|length=7975bp|location=Sequence derived from alignment at Sc0000003:4989021..4996995+ (Branchiostoma lanceolatum)
TCTTGAAGCAGTTTTGTAGCGACCTTCGTAACATTTTTTATTTTTAAAAA
TTGAACAATCATTTTCTGATGGCAGTATTCAGTTGTTGTTTTTTTCTACT
CATCGCCCAGCGCGAATTTAGAACCACCGCGGATTTTCCATTTGCCTGAA
ACCGCGGATTTTAGGCCCCGCGGATCTAAGTAGACTTACAGTATATCCAT
GATTTGATTGACAGGAATGACAAGCAGCTGGCATCAGCCTACAGTGCTGC
TGAGACAAAGAAAGCGACGATGCAGCTGCTACGCACCATCGTGGTGCTGA
CCCAGTCCCTCAAGGGTCTGCCTGATGATGTCATGATGACCATGAAGCTG
CTCTACTATGATGATGGTAGGTTTAACTTGACCTGACCTGACCTGACCTG
TCCTGACCCGACCTGACTTTATTTGGATCCACAATTAGCTTGACATTTCT
GTTAGCTATTCTTGCTGTGGTCCTTTACATGTAATACGTCAATACAAATC
ACATAACACAGATGTGTTATGACAGACAGGGTAACCACAGAACAATCATA
CTATTACTACGCTGCTACATTCCTATTTTCTGCTTTCCTCGAGTACTTGT
TGACGTGACTTCAATGTGTCAACTGTATCCACACATGACTGTTTTGGTGT
TTGGTATATGGGATGTGATTGTATTGTATTGTATTGTAATGAGATGCTAA
CAAATGTTACATTGAAACACTAAACTGTTTTTTTTTTTTTCACTCTTGCC
CCTTTCATTCCCTTTTATTCCTCTTTCAAAGAATATAACAAAGAAGATTC
CTTTAACTATATGTCTGCCCCATCTTTAAGCCATTTCTGATAACACTTCC
TCTCCTGCAAACTTATCCCCCCCCCCTCAACCCCCTCCCCAGTCACCCCC
TCAGACTACCAGCCCCCTGGCTTCAAACCTGCCAGGGACTGATAAAATCT
GGTCTATGTGGACAGGTGATCACTATACTCAATAGACAGGATTCTTAATG
TTCGTGTCAATGAGAAAAAGCATCCAAAGGACCACCAAAAAGTGGTCACA
TTGGCCAGGTAGTCTTTACGTAGAGGTGGCCACTTGTCCAAATTTGATTG
TATAATGAAGAACCTTTCTCTATCTATATGTCTGATCTATCCTTAAGCCA
CTATCCCCCCTGCACACTTAACCCCCCTCAACCCCCTCTCCAGTGACCCC
CTCAGACTACCAGCCCCCCGGCTTCAAACCAGCGGACTCTGAAGGTTTCC
TGTACAACTGTGAGCCCATGAACATCAAGGTGGGAGATGTCTCCACGCAG
TGGCATACCGTCAAGCTGCGTATCAAGACAGACAGCTCACAGTTTGAGGT
AACCTCTATTTGTGGTATTTTCTGCAGAGTTATGTCAATCAGGATATAAT
CAAACTATTTATGGCATACAAAATGACTAATAAACTGGTGGAGGCACCCG
ACAACTACAGACCAGGCTTTCAGCTAGATGTGCAAAAGCTAGGTGTGACA
GGTTGATCAGTAATATAACCAGTTGCTGCTGTGTCGCGTGCCTGTGAAGC
TGCATGGTGTGTTACGCCAAAGGGTGCTTTACAAAGGGTGCTAAACAGAT
ACTGAAACACGTTGTTGAAGGTTAGACATCCAGGTAATAAGATACGCCAA
AAATACACATACTCACTGAGCAACTGGATAAAATTTTGAAACAGACGTTT
CAGACAGCATCTGCTATCTTTCGTCAGATACTGAAACAGATTTAATTGTG
GGCTCAAAATACTGTGTGCATATGTACTTTTATACACACAAAGTTGTAGC
TGTTAATTGGCCGTGCACCTAATTTTTGACTATGAGTGCATTGGTGCACC
TAGATATTTGAATGTGTAGGGCACAGATGCAAATAGCACTATTTTGAACC
CTAAGGCCACACCAATTTAATTTGTTGGTTTAATAACGGATTTTTATTTT
TAAAAAAAATTTTAGCCAGCCTTCTGTTTTCATGATTTTTTTTTCCAATT
TTTTTTTAAAAATGAAAATCTGTTGATCAAGAAATTAAGATGGTGTGGCC
TAAGGCTTATTGTAATAAGTTCTGCTGTGCTGTGTTCAGGTGAGGGATCA
GGAGGGTGTGCCGGCGGGAACAGAGCTTGCTGATACTGACGATAGGAACA
GCCTACAGGGAGGAGCTGTCATCTCTACAGCAGGGCTGGACGGGGAGGAC
ACAGAGGAACCCATGGAGGTAGAGGTAACCTTCGTTAACATTGATCCGCC
AGGTTACATGAATCCGCCACTTTGAAAAACAGTGGGTTTGAGAGATCTCT
ATTGCAGCACCCCCAGGTATACACATTTCATATGTGCAGGACATTGGGTT
GGAGATCTGTTTTTACGTATAATCATGTACCCTGGTGGAATTACGATAGT
AGATGTTAACTGGAAAATCCATTTACAGTGAAAATCTAAAAAAACATCCT
ATCATTATCAAATCAATTACCAAACCATTGTCACTAAAGCATAGCCTTTA
GTTTTCTGCGGAATTAAAGCAATTCTATATGTTGGTTCTCCATTTTTTAT
ATGATGCTGAACTGAAATCAAAATGGAACCTTTTGAGACTAAAGAGATTA
GTCCATGCTTTGATAGATACAGTTTTGGGGAGTAAATACAGTTAGATGCA
AGTTTTCGTCCTAATGTTCTGCTTTCATGTTGATCCCTTGTTAAGAATTG
TCCGAAAATTAATTGGTGTGGCTTTAATTCTATTCTCAGACACTGGGAAA
ATCAACTGAATCAGCTAAGACAGCAAAGCAGAGGGCACCTTCACCCAAGC
AACGCCTTACTCCCAAGGAATGCAAGGATGTACCAAATACAGGTAACTAC
TTCAGCAAGCTTGTTGATTGCTTATTGATTTAACTATGGATTACCGATAG
ATGCCTTCTCTGTAGACAATGAATGAGCTTTACACTACTTGATTTTGTAA
GTCTGTTTTTTTCTCCCTTTGTGTATCTTTGTTTGACTTTGATAGGATCT
AGATTGAAGAGAAAAAGATTTTCCATCAAAAGGAAATGAAGGATTTTCGA
TTGAAGGAAATCACAGTGTGACAAGCTGGCATTGTAAAAATTGAAATGTT
GCTATACTGGTTAAGCAATACAGACACAGGAATTGTTTGCTCTGTTTCTG
TCTGCTATTCCCAATATACACAATGCTGCACTGCCATTTGATACAGCGCC
CCATAAGACCCCAGAGTCCGCCAGTCGCCCCTCCGGTTCACAGCAGAACC
AGGAAGAGGAAGACATGGGTGTTCGCTGTCCCTGTGGGTGTAACGAGGAT
GACGGACTGATGATCCTGTGTGCCGTCTGCGACTTCTGGCAGCACGGCGT
CTGCTTCAAGGTCATCCGAGAGGAGGATGCTCCGGAGAGACACATCTGTG
ACGTCTGCGCAGACGTAAGGGCTAAAGATATGCAGGATGATTGATGGATT
AAAGGATGGATTAAAGGATGGATGGAATGATGGATGGATGGATGGATGGA
TGGATGGATGGTTTAATCAATCAATCAATCAATCAATGACTTCTACATGT
TGTGAGCCTCTATCCATTACTTATTTCAAACCTTTAAAAGATAACCATTT
CTAGAAACAATTTTACAGAACACCTGTAGAATAATGAAAGAAGCAACCAG
TCATAGAAGTATATTAAAAACTTTCTAGTTTTATTTTTAGATATTGCCCC
TAGATGTATCCAGTAAAACAACTTGTACAAACTAGTGATAATGTGTAAAG
TAGAAATAATGGTATTGGTAATGGTACTTAATGTTAAGAAAATAACTTTT
ATTTTATTTTACATCCTCAGACTGCAACCCCAGACAAGTATCCAACAGAC
CCCTACCTGGCCAGCCTCTCTCCAGTCAAAGTACAGGTTAGTAGTTAGCA
TGATAGAGATTTCAACTACATGTAGTATCTTTGTCAGGAAGGTTACTACA
TGTATGTTGTCGTTATCATTTGTATCATTTCTCTTTGTCGTATTGGGATA
TAATTATCACAACAAGGATGCATTCTTTGCAGTCACATTTCGGACCACAT
CAAAGTTGCCTTGTCGCTTTGTCACATATGTCTGCATGTCACGGTAATAT
AAGCTAGGAGGTCATGTTTTAAGAATGCATCCTTGTGATGATTTTATTAC
AATACATTACAACAAAGAAAAAGCAGCTGCTGCCAAAACGTTGGCAGGGA
AAAGATAATGTTTTCTACCAAAGAAAACTACATGTACTGGACATATGCTT
GTTGCGGGTCCCTTGATTTTCTTCTTACACCTTTAGGCCACCTGTCTGTG
GCGTCGTGCCCTCCTGGCCTGTACAGAGGCCCCCCGGCTCCTGATCCCCA
GCTTTGCCAGGAGACTCGGCGTCGAGATGAACGTGGCGCACGGACTCGTC
AACAGATTGGAGAAGGAAGGCTTCGTGAAAAACGCAGCAAGAGGGAAAAG
GTAACTTCATTTTACTATTCATCTATGTGATCTTCTTGTCATCAGTGTGG
CGCAATGATTAAGCTATTCCCTTGGGCAAGGCACTTGCAGTGACCAGGGC
TGTGTCCAAGACCTGTCCCTCTGTCCCAGGATGGAAATTTGCTTGTTGGA
ATGGAAAAAAATTCACTCCATTTGCCCCCAAAAAATCAAACATTGAGTGG
GTATAAAAGAAAATTAAAGCCCGAGTAACACCCACCGAGGGTTGTATCTA
TGTAATTGATGAACCACATCGAATAAGAGGTCACCTCTATTTGACTTTGT
AGAATTTCTTTGAACTGCTAGCTCCTTTTATCATGACTTGCTAGAAAACA
TGAAGGTGTTAAAGAAGCTCAAAGCTGTAAGCTATGAGTGAATGCCTGAC
AAGCCTTAATCCCAAAGGCTTGACCTAAAAACTACCCTGCTGTTAGATCT
AGAAAGAGTCCTGAAACACTTTTCCATTTTTCTTCAGGCTTGGTAAGACA
GTTGATAAGGAAATGGTGACAACGGAAGGCTTCAGTAAATACTTCAGCCA
TGCTGACCCTGTGAAGAACACAGAGAGTGAGTATGCTCCTGCCAAGGTGT
CGGAGAAGGAGGAGACTCCTGTGAGAGGAAAGGCCACAGGAGATAATGAG
GTAAACCTAAAAACTTTTTGAACAGGTAGTAGGTGTGTTAGTGGATTCAA
TCTTCAGCTGACCGACACCTTTCACACCACAGTCATCCCTCAGTAAGTCA
TTTGAAGCAGTATAGTTAGCCGTTTAGAACTTTATTCAGCCTGTCACCCA
GACTGTTTTCCCCAATGTTTTTGAACAGATGCTTTACCATCTTTCCGTCT
TCATTGTAATGCAATGAATTAGCCAATACTCAGCTCTGTCCTTGGTCTGT
ACAACATCTGTCCTTGGTGCTGATTGGTCTGCACAACTGTCAACATCTGT
CCTTGGTGCTGATTGGTCTGCATAGCCTCTGTCCTTGGTGCTGATTGGTC
TGCATAACCTCTCTCCTTGGTGCTGATTGGTCTGCAAAGCCTCTGTCCTT
GGTGCTGATTGGACTGCACAACATCTGTTCTTGGTGCTGATTGGTCTGCA
TAACCTCTGTCCTTAGTGCTGATTGGTCTGCATAGCATCTGTCCTTGGTG
CTGATTGGTGTCTGTGGAGTTGACCAATTAGCACACTTGCAAAAGTTGGG
AAACTTGGCATTCTAATCCGTGTATTTTGACACTTTTCCTTTGAAATAAG
AAACATCTATCCTGAAATTCATCTGTTCCAACAGTATGGATTTGCTGCTT
TAGGAAAATGTCTTTTTCTTCATTGTTTTTTTTAATATAGACCTGCTGAA
ATGAAGAAATTCACCCTTGTTGTTTGTCCTGGGTATTTAGATGAAATAAA
GCTACATTTCCTGCCCTACAGGTTGATGTGTTTAGTTTTCTAGGTTGATG
TAGTGTTAGAACATTCCATATTCAAAACAAGTTTGATAAAGACTAATTTT
TTTTAAATCTAGCCCTGGGGTATTGCAAAATTTACTTTGTTTTTATCCTC
ACTGTCGGAAACTATAAGCCTGTGTTTACTGCATTTTCCCCACAGGTTGA
AGCGATAGTGTCGCAGGCATCCCACCTGCAGCTGTCTCCCCCTGCTGCCA
CCAGGGACTCAGCAGAGCCGCACGGGAACAAACTGGCCAACCGCAAACTG
CAGCTCAGCCCGGTACGTTTATCCCTTCCCACTCTTACCGACATGGGAGT
ATCAAATACAAACTTAGGACTGCATTCTATATCTGATAATTGTTTAGCGT
CTTATTATTGTAGCTTGTACATACATACGTGACTGGTATACATACATACT
GAAGACTTCAGGAAAGTAGCCAGGAAGAGATTTTAATTCTACATGAAACT
GGAAGAAAGGACTGAAGAGTCTGAATGTCCAGAACTTTGTTCAAGGACCA
ATTTTCGTATCAGATACTCACAGAGTTCATATTAACATTCAGCATGCTAA
GGTAGCTGTTTGGCACCAAATACGTATTTGCTAATGCTATGGGGTTATTC
AGCAGGAAGTAGGTTAAGGTTGATAAAACTGTCAGTTCTATTCAAAGAAG
CTTAGCTAGAGAAACTTTCAATAAGTCGTGAAGAACTTGTGGTTTCAAAA
TTGAACATGTTGATGATTGTGTTGTGTTCTACAGGAACAAGGTAGAAAGT
CCAGTAAAAGGGAGCGAAAGAGCAGATACACCTCCCACGACAATATGGAC
ATCTCCTCTCCTAAAACACGGGGCAGAAAGAGAGTCTTCTCCCAGGCCAA
CAAGGTACTGTGAACTTATTTTGCTTTTGCAGTATTTTAAATCAGCAGTT
GAAATAATTCTGTAGTACAGCAATCACACTAGGGAGACACATTCCCAGTG
TCAGGACTTCATGGCGAAAACTGAAAAATAAAACTGTGGTAAATGTTTCA
AGATCGACAGTATTATATGCTCTTGGCTATGACCTGTTTGTTGTGGGTTT
GTTGCAGTGATGCTGCATTTGTGAAAACCTGTTTTTGTTGAGAGATCTGT
TATGATACAGTTTGTACAAGTCCCTTTGGATCTGCCATCTCCTCACCAAA
AATGATTTGATTCAATATAAATGCCAGGGTATAACTTGATAGCCTTTGCC
AAGGTAGTAAGGTATTGAATTTGTAAATAAGCAGCATTTTGATTTTCAAG
TTGTTTTGTTGCTTTTGTAGGATGATGAGTTTGAGATCAGCTGTAGTCAG
GACACCGAGCACACCCAGACACAGCCCACAAGGAGCAGCAAACGACGCAA
GGCCAGCGTCACCGAGAGGGCCATCATGGTGTGATGCCACCTGGAATAAC
AGTGAAGAACTGCAGTTTAATAGCACATAAAAGGCAAAGCCATGCTCCCC
TTAATGCCCTTTGGTGGTATGCATAAGCACAGCCTCTTTGATAAACGCTG
GAAGATTGAGATGAATCTTGAAAAACTCTTCACATTGAACATTGTTTGTT
GCTGTTTCGTAGCAGTTGTATTGCCATGCTCATTCAACTTAGTTGAACAG
TCGACAAAGAAGAAATACTCATTTGACATGAATTAAGCATAATGACTTAA
GATCACTTTGTTAGTAAAGTTTACGTTGAATGCCTTGCATAGTCTGTTAA
GGAAAGAGTTTGTTGTTCATAATCAGTAGCTACACAACATGCCAATACCT
CAGTGGAAGGCCCATGCTAAGTTAAACAAGCACTTGACCAATTATGTTAA
TATAATGTTGTAAATATTTCTGTTCTTGGATCTTCTCGTTCTCGGCGTGG
CATGGACCAGTAATCTATTTATTAGTCTAAGAATGTTAGCACTTAGCTTT
GTAAACATGTTACATGTTGCATTTTAATTTATGATGATCTAAACTATCAA
GTTGTCCTAACTTATAAAAAAAATCAACATAAAAGTTGATGATGTAGAAA
TGATTTTATATTTGAGAAAGGATCGTTAAGCCTATGGAAACTTACAAAGT
TCTGATTAAAACTGTTTGTTGAAAA Coding sequence (CDS) from alignment at Sc0000003:4989021..4996995+ >Blg00644.4 ID=Blg00644.4|Name=Blg00644.4|organism=Branchiostoma lanceolatum|type=CDS|length=1452bp|location=Sequence derived from alignment at Sc0000003:4989021..4996995+ (Branchiostoma lanceolatum)
ATGCAGCTGCTACGCACCATCGTGGTGCTGACCCAGTCCCTCAAGGGTCT
GCCTGATGATGTCATGATGACCATGAAGCTGCTCTACTATGATGATGTGA
CCCCCTCAGACTACCAGCCCCCCGGCTTCAAACCAGCGGACTCTGAAGGT
TTCCTGTACAACTGTGAGCCCATGAACATCAAGGTGGGAGATGTCTCCAC
GCAGTGGCATACCGTCAAGCTGCGTATCAAGACAGACAGCTCACAGTTTG
AGGTGAGGGATCAGGAGGGTGTGCCGGCGGGAACAGAGCTTGCTGATACT
GACGATAGGAACAGCCTACAGGGAGGAGCTGTCATCTCTACAGCAGGGCT
GGACGGGGAGGACACAGAGGAACCCATGGAGGTAGAGACACTGGGAAAAT
CAACTGAATCAGCTAAGACAGCAAAGCAGAGGGCACCTTCACCCAAGCAA
CGCCTTACTCCCAAGGAATGCAAGGATGTACCAAATACAGCGCCCCATAA
GACCCCAGAGTCCGCCAGTCGCCCCTCCGGTTCACAGCAGAACCAGGAAG
AGGAAGACATGGGTGTTCGCTGTCCCTGTGGGTGTAACGAGGATGACGGA
CTGATGATCCTGTGTGCCGTCTGCGACTTCTGGCAGCACGGCGTCTGCTT
CAAGGTCATCCGAGAGGAGGATGCTCCGGAGAGACACATCTGTGACGTCT
GCGCAGACACTGCAACCCCAGACAAGTATCCAACAGACCCCTACCTGGCC
AGCCTCTCTCCAGTCAAAGTACAGGCCACCTGTCTGTGGCGTCGTGCCCT
CCTGGCCTGTACAGAGGCCCCCCGGCTCCTGATCCCCAGCTTTGCCAGGA
GACTCGGCGTCGAGATGAACGTGGCGCACGGACTCGTCAACAGATTGGAG
AAGGAAGGCTTCGTGAAAAACGCAGCAAGAGGGAAAAGGCTTGGTAAGAC
AGTTGATAAGGAAATGGTGACAACGGAAGGCTTCAGTAAATACTTCAGCC
ATGCTGACCCTGTGAAGAACACAGAGAGTGAGTATGCTCCTGCCAAGGTG
TCGGAGAAGGAGGAGACTCCTGTGAGAGGAAAGGCCACAGGAGATAATGA
GGTTGAAGCGATAGTGTCGCAGGCATCCCACCTGCAGCTGTCTCCCCCTG
CTGCCACCAGGGACTCAGCAGAGCCGCACGGGAACAAACTGGCCAACCGC
AAACTGCAGCTCAGCCCGGAACAAGGTAGAAAGTCCAGTAAAAGGGAGCG
AAAGAGCAGATACACCTCCCACGACAATATGGACATCTCCTCTCCTAAAA
CACGGGGCAGAAAGAGAGTCTTCTCCCAGGCCAACAAGGATGATGAGTTT
GAGATCAGCTGTAGTCAGGACACCGAGCACACCCAGACACAGCCCACAAG
GAGCAGCAAACGACGCAAGGCCAGCGTCACCGAGAGGGCCATCATGGTGT
GA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00644.4-exon-Sc0000003-1570713199:4989021..4989386 | Blg00644.4-exon-Sc0000003-1570713199:4989021..4989386 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4990214..4990368 | Blg00644.4-exon-Sc0000003-1570713199:4990214..4990368 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4991110..4991244 | Blg00644.4-exon-Sc0000003-1570713199:4991110..4991244 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4991760..4991862 | Blg00644.4-exon-Sc0000003-1570713199:4991760..4991862 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4992217..4992434 | Blg00644.4-exon-Sc0000003-1570713199:4992217..4992434 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4992841..4992906 | Blg00644.4-exon-Sc0000003-1570713199:4992841..4992906 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4993307..4993470 | Blg00644.4-exon-Sc0000003-1570713199:4993307..4993470 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4993958..4994120 | Blg00644.4-exon-Sc0000003-1570713199:4993958..4994120 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4995066..4995182 | Blg00644.4-exon-Sc0000003-1570713199:4995066..4995182 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4995655..4995774 | Blg00644.4-exon-Sc0000003-1570713199:4995655..4995774 | Branchiostoma lanceolatum | exon |
| Blg00644.4-exon-Sc0000003-1570713199:4996191..4996995 | Blg00644.4-exon-Sc0000003-1570713199:4996191..4996995 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:4989021..4996995 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00644 |
|
