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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:2527545..2532896+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00640.0 ID=Blg00640.0|Name=Blg00640.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5352bp|location=Sequence derived from alignment at Sc0000003:2527545..2532896+ (Branchiostoma lanceolatum)
GGATGGTCTGTTATTCTGGCGATGACTTCATAATCCAGAAAAAGAGGAAC
ACTATAAAAACAGCTGAGCTTGTGTTGCAAACGGTAGAGAAGGCTGTACA
ACGATCATAACAAGACGTTTGGAAGAAACGATTGAAAGATCCGGTCTAGT
CGAAACTGCCTAGTTCATTCTCAAGTATTTGTTGTCATTGGTCGAAAGAA
GGTAAATGTCTGTGCCAGCTAAATCGTACCTGCCCCAACATCTGCTTGGA
TATAATTTATCCTATTAAAGTTACGGCAAATCTTGAAAATGTTCGCGGTG
GTTTTATTTTCGTGATGACCTCTGCAATGGAGAGCGAATGCATGAAATCC
CAAAGATACTTTTCCAATGTATTACTACAGTGCCTGTACTATAATACTGT
TCCAACTGCGAACTTTAAAACGCTGGGAAAACCTAATTTTTTCCTGCGTC
CCAAATCTGAGTCCCTGGGAAAATAAATGACTTTTGAGTTTGTTATTCTC
CCAAACCAAAGCCCTACAGACTGGATGGGGAGCACAGAGAGCACCCCAGA
TGACCAGCGGACTCTGTCGGAGGTCGAAGTTCAGCTCCACGGCCAGCGCA
AGGACATCAACCTTCCCGGGGAGTTCCAAAACGACAAATTGGCCTTCATC
GTGGACAACGTCTTCTCAAAAGAGGCAAGGAATATCAAATGTTTGAGATA
GAAAAGGAGCGGGTGGTCTAAACTGGTGGAGTCTCCTATCTGATTGTAAA
CTCTACTCTACTCTGCTCTGCTCTGCTCTGCTCTGCTCTACTCTACTCTA
CTCTACTCTGCTCTGCTCTGCTCTGCTCTACTCTACTCTACTCTACTCTG
CTCTGCTCTGCTCTGCTCTACTCTACTCTACTCTACTCTGCTCTGCTCTG
CTTCATTCTCTGCTCTGCTCTACTCTGCTCTGCTCTGCTCTACTCTACTC
TGCTCTGCTTCATTCTCTGCTCTGCTCTGCTCTGCTCTGCTCTACTCTGC
TCTACTCTACTCTGCTCTGCTTCATTCTCTGCTCTGCTCTACTCTGCTCT
GCTCTGCTCTGCTCTGCTTTATTCTCTGCTCTACTCTACTCTACTCACTT
TACTCTACTCACTTTACTCTGCTCTGCTCTGCTCTACTCTACTCCATTAC
TACATTACATACAACAAGTATTTTGTGTTTTCTATATGACTGACTGTCAT
GCAAAATGTTAAATGTATTCAACAACAGCATACAATTCATTTTAATGAGC
ATTGTTATAAAATTATGTGATTTTTTCTTTCCTTCTTTTCAGGAATGTCA
AGAGCTGATTCAGCAGACTGAAGATCAGGGATATGAAGTTGCACTGGTTA
ATGTTGGAGGTGGAAGGTATATGAATACACTTTAAGTTCAAATTCCTTAT
GTTATCAAGGATTTTCCTCGAGCATGTTACATGGCACTACAACAGTTGCA
CTCTAATGGGTCACTTCAGGTACATAAATCTGAGGATTAAGTTTAGTTAA
AGTCCTCCCGCACAATAAGCTAGCCATAAGGCGGCACCCATCTCCGTTTC
ATAGCCCTGGGCCACACTGTGGTGCAATCACTGTAGCAGGGGGCTAGTCC
ACTGGCAGTGGAGTGTGTAACATTAAAATAACTTCCATACTGTTTCAAAA
GTATGTACAATTTTCTTAAGTTGTTGGTATGACTTAGTGCGCCTCTTATC
CAGACATGCCCTACCCGGATGCAAACCCGGGGCCTCTGGTTCCTAATGAT
TGGTACCAGATGTGGTAAGTGACGGAGGTGCAGACCACTACACCACAGGG
ACATGCCCAATCTAAGGATAACTGTTAAATTACTTTTTTTTAGACAGATC
CTGGCTACGGACTACCGGAACAGTGAGCGCTGCATCGTGGACTCAGTGGA
GCGTGCAGAGTGGATCTGGGAGAGGATCAAACAGTACGTGCCGCGGAGGT
GGGCCAGGAGGAAAGTACTCGGGCTCAACGAGAGGTAAGAATTAGAATGA
AACCTTACCTGTTTTGGTAACGTTACGTTCCATGGTAAAGTTTAATACTT
AACTTCAACACAAGCAAATGTAGCTCACCTCGAATTTTCAGCTGGGGAAT
AAAGGAGGTCATCTAAATTAGAGTCCACCAGCTGACTCACAACAGAGACA
GGAGCTGATATCGCTTGCCAGGCAATTACAATATTTATTACTCTTAGCAA
GTGTCCCTAAGGTCAGGTGCTAAGAGTAATTGAATCACTCCTGAAGAAGG
TCAACATATGAGCGACTGAAGATTCCAAGTGAGCTACATTTGCTTGGACG
TTCAACACATGTTAGGAATACGTACAAACTCCTATATGTACGCAACCAAG
CCCCTGACATGACGTTTGTGTTCCTCAGACTGAGGTTTCTGAAGTATGGT
CCAGGTCACTACTTCCACCCTCACATGGACGGAAGTTACCGGCGCGACAA
CGGCGAGAGGAGCTACCTCACGTTCATGTTGTACCTGAATGAGGTGAGTG
TATAACTGTAGATTAATATCGTCCAAAGTATTGAGAAATTTGAGATTAAA
AAAGAAATTGTCTAATGTGTTCACTTGCTCTCTTCTGGACCTCAGAACCT
TAGGGCACAAGTAAGATTAGAAGGTCCATCCATGTTTATGTCACAACTAC
TATAGGCTCTCGTTCTTCCCTCAGACCATATCAAAGAGTGGAACCAACTT
GAGCCTAGTATGGCAGAGGCAAGGAAGAATATATATATTACTAACTCAGT
AAATTCACTTGACAGTTTGTCCTGTCCTTTGCACACAAATTCAGTCGTTT
ATGCTCCTTAGTGCCTTTCCTTTATTTTCCCATTGTTTTATCTGTACCGG
GCACTTGTGTTGTATCTAACACAAGCACAACTGCTGATAGTCTCAGATAT
GAGGCTAAGCAGTAAAGAAGAGAACTGTTTTAAAATGGCACTATAAGGTG
AGGTGGTAAGACCCTGGGATCATGGTCTGCTTTATTCTTCTTTCTTGCAG
GGCAGTACCGGAGGAGCTACAAACTTCATCTCCCCCATGTTTGCCACTGG
GGACAAGATCAAGGAGAAAGTGCCTGTCGTCCCTAAACCTGGTGAGAAAT
GCTAACTTTTGCTTTTGATAAAATGATCGCTCTCTCCTGAAAAGACCAAC
TGAAGCTGAAAACACCAAGAATTAATGCTGTTAAACTGCAATTATCAACA
CAAGAATTTGGACTTACCAACATTTTTGACTGATCAGCTCCAGTTTTTGT
CAAGGAATGAGCAATCCACTGCTTCTGTGACGTCAGGTTATGCAGATAGA
ACACATAACCTGTGGAGGGAGAGGGTGGGCTCCACCTTCCAATATGGTGC
TAACAAGTTGGTTTTATGTGACAATCAATGAATTTAATGTTTTACATTGT
ATGCCTCAGATTTTGAATGTAGCAGTATTTTAAAAAGCTAATTTCATCGA
TTTTCTAATAAGTGCAATAAGTATGATGGCAGTGTAGCAATAGGCCCAAT
TCATCCTACATGTAGTGCTGCCAGGTCTTTTGAAGAGTAAACCATTTTTT
GATTGATTTGATAGACAAAGAGATAACAACCCACTGCCCAAATGGCCTCA
CAGAAGGCTACAGAACTACCTTAAGTTTACCAAATTGAATGTACGATTGA
TTCTAAACTTCCAGGTCGAGTTCTGGTGTTTCAACACGACATCTACCACG
AGGGAGAAGAGGTGACCACGGGACTAAAGTACGCCATGCGGACGGACGTG
ATGTACGGCGCAGAGCCGGTCCAGGAGGAGGAAGAGGAGGAGAAGGAGTA
ACCTATAGGTCACATGTACTCTCCAAGCAGAGGTTAGGCTTGACGGCAGC
AAGTCAATCTGTTTTCAACCCTAATAGTTACATTCAAGATTAATATGGTG
TTGTGACGACGCTAAAAAAAATCATCTAGAGCAGTTAATGGCGGACCGTA
GCAACTGGAGGAAGGGGGTTAACTTATTCCGGGCAACCCGCCTGACATGA
TGATGATGAAAAAAAATTTTAAAGCTGTCATAACATGATGATCACATTTG
TGGTACTTTTTAAATTTTTTCTTAGCATCATCACAACCCCATCTTAATCT
AGAGTTGATCTTTGACATGGAATGGGTGTCAAAAAGAGCACTGCAATTAT
TCAAGATTAAAAGTACACTAGCCTAAGGATGTTAATAACCCTTTACTATA
AGGACCAAAAATGTAAAGTTGAAGAAACAAATCTATATTTTTCATGGCTT
TTTGGCTGTTGTAAGGCCGATTCAATTCAGCAATAAACTTTAAAACCTTT
TATAAGCAAGATCACTTCAAGATACTCGCTTTTGTTTCCTACCAACTCAT
ACTGCCAAGTTTATACTAAATTTTCCCGTTTTTATGGATACTGTTGTATA
GTGTACAGGAATGGTGTATTTTAAGAAACTAAAGAGTGACTATATTTTAT
CACAGACCAAACTGATGAGAAATACACTGAAGAAAGCTTTAATTTGACTA
TAGAAGAGATCCAATATTGCAATAAGGATGTTTTATGTGTGGTAAATATA
GGTGACATTTAACCTTCTCACAGCTGCCTAAACCAAGAATCAAGACAAAT
GGGTGCCAAATGGCTACCTTAGCATGCTGAAAGTTAATTTGTTGAACAAA
TGCAGTTATTTTTAACCATCTTTGTACAGTGGATCAGTATAATCCTAAAT
ATTAGTCAGAAAGACATCTAAAACCATTTCTTAAACAGGGTAGAGAAAAA
TTTGTGTATTCAGTATCATAGTTGTGTTATGGTGTCATTACACATGGCCA
ATGGAGGCTTCTGATTGGTCGACACCATCTAGCTATGTAATAATGCTTGA
TAACGTTGCATAGTCATAATGATAAAGTAACACCTTTGAAAAATACGACA
GTGCGACACTTGTGCTTCTGTAGTGCATTTTATGTACTTCTCATGACGGT
AAAGTTGTACTTTTCACGATATATTTGGATGTTTTACATTGAAAAAGAGA
TTGTGTATATTTGACTCACATTATAACTGTACAAGCAAGACAAATGGTAG
AAAAAATGCAGTATTTTCTAGACAATAAGTGTTGCTGTTTCCACGACTAC
GACTAAACCTATGAAAGGTAATATTTTGAAAGACTACAATCATGTATTTT
ACAAAGAAAATGAATGCATTCTGACTATATTAAAGAAAGATATCACCAAT
TTAATTTGTTTGTTCTAAGTGTGATGACATCATGAAAACAGAGGGCTGTG
AGAAAAACTTTTTAAAAAAATACCTGCTTTTCACAAAAATTTGGTCTTCC
CATGTGTGTTAACAGTGGTTTTCACGAATTGAGAAAATATACCTGGTACT
GG Coding sequence (CDS) from alignment at Sc0000003:2527545..2532896+ >Blg00640.0 ID=Blg00640.0|Name=Blg00640.0|organism=Branchiostoma lanceolatum|type=CDS|length=708bp|location=Sequence derived from alignment at Sc0000003:2527545..2532896+ (Branchiostoma lanceolatum)
ATGGGGAGCACAGAGAGCACCCCAGATGACCAGCGGACTCTGTCGGAGGT
CGAAGTTCAGCTCCACGGCCAGCGCAAGGACATCAACCTTCCCGGGGAGT
TCCAAAACGACAAATTGGCCTTCATCGTGGACAACGTCTTCTCAAAAGAG
GAATGTCAAGAGCTGATTCAGCAGACTGAAGATCAGGGATATGAAGTTGC
ACTGGTTAATGTTGGAGGTGGAAGACAGATCCTGGCTACGGACTACCGGA
ACAGTGAGCGCTGCATCGTGGACTCAGTGGAGCGTGCAGAGTGGATCTGG
GAGAGGATCAAACAGTACGTGCCGCGGAGGTGGGCCAGGAGGAAAGTACT
CGGGCTCAACGAGAGACTGAGGTTTCTGAAGTATGGTCCAGGTCACTACT
TCCACCCTCACATGGACGGAAGTTACCGGCGCGACAACGGCGAGAGGAGC
TACCTCACGTTCATGTTGTACCTGAATGAGGGCAGTACCGGAGGAGCTAC
AAACTTCATCTCCCCCATGTTTGCCACTGGGGACAAGATCAAGGAGAAAG
TGCCTGTCGTCCCTAAACCTGGTCGAGTTCTGGTGTTTCAACACGACATC
TACCACGAGGGAGAAGAGGTGACCACGGGACTAAAGTACGCCATGCGGAC
GGACGTGATGTACGGCGCAGAGCCGGTCCAGGAGGAGGAAGAGGAGGAGA
AGGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00640.0-exon-Sc0000003-1570713199:2527545..2527745 | Blg00640.0-exon-Sc0000003-1570713199:2527545..2527745 | Branchiostoma lanceolatum | exon |
| Blg00640.0-exon-Sc0000003-1570713199:2528056..2528218 | Blg00640.0-exon-Sc0000003-1570713199:2528056..2528218 | Branchiostoma lanceolatum | exon |
| Blg00640.0-exon-Sc0000003-1570713199:2528837..2528910 | Blg00640.0-exon-Sc0000003-1570713199:2528837..2528910 | Branchiostoma lanceolatum | exon |
| Blg00640.0-exon-Sc0000003-1570713199:2529388..2529528 | Blg00640.0-exon-Sc0000003-1570713199:2529388..2529528 | Branchiostoma lanceolatum | exon |
| Blg00640.0-exon-Sc0000003-1570713199:2529923..2530037 | Blg00640.0-exon-Sc0000003-1570713199:2529923..2530037 | Branchiostoma lanceolatum | exon |
| Blg00640.0-exon-Sc0000003-1570713199:2530545..2530635 | Blg00640.0-exon-Sc0000003-1570713199:2530545..2530635 | Branchiostoma lanceolatum | exon |
| Blg00640.0-exon-Sc0000003-1570713199:2531209..2532896 | Blg00640.0-exon-Sc0000003-1570713199:2531209..2532896 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:2527545..2532896 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00640 |
|
