Blg00623.20 (mRNA) - B. lanceolatum

Overview
NameBlg00623.20
Unique NameBlg00623.20
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000301:88303..95677-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00623.20 ID=Blg00623.20|Name=Blg00623.20|organism=Branchiostoma lanceolatum|type=mRNA|length=7375bp|location=Sequence derived from alignment at Sc0000301:88303..95677- (Branchiostoma lanceolatum)
ACTGTTTTTCCGTTGTTTGTTGTTGTTGCTCCAGGATATCCCACTTCGTT TAAACACTTTCAAGTAAACCCCAAGTCTTAGGGACGTGTTGCAAAAGAAG CTCTGGAATTCTGACTACAATTTTATACACGTGGGTTCACCCTTGGTCGG AGGAGACAGGAGCTCGAAGGATCCAAAATGGCGGAAGCATCATCAGAAGG AGGAGAAGGAGAGAGTCCATCACTCGATCGAAGCCTGCAGATGAACATGT TCGACTGCAGCATCTGTCTGCAGATGTTCACCCGGCCCAAGGTGCTGCCG TGCGGACACACGTTCTGTAAGGACTGCCTGGTAACGTACGTTAAAGGCGG CTGGTCCTGCAAATGCCCCACATGCAAAAGACCCGCGTACCTAAACGGGA AGAAAGGCTCAGAGGGAGTGGAGAGTTTAACGGATAACATTTCCTTAGGA AATCTTCGTGACGACTTCGCAAGTCTCACAATCATCAACAAACAGGGCAG GGAGGTTGAACGTCATGTACAACTGACTAACCAGCAAGTTTGCGTGAAGC ATTACGGCATGGAAGTCAAGTTCTATTGCCCCAGCTGTGAGGAAGTTATT TGTGGAGAGTGTATTGTTGATGAACACAACACACATGGGGTCACCAGGCT TTCCAAGGCTCTAGAGAAGCAAGCCGAAGAAGCCAAAGAACTCATGGGCG AGGGAAAGAGATGGATTGAACAAGTGAGAGGAAAGATCACAGAAACAGAA GAAGCAAGAAAGATGTTGAAGTTTGAGGAAGAGACACAATGTTTGTTAGT GAACAAAAGTGCAGCCTGTCTGAAAAAGGTGCTAACAGAATCTGTGGATA AACGTGCAACCGACATTAAGGAAGAGTTGAACGCTTTGTTTGCGTTGAAG CGTGTAGCTCTAACAAACTGTAAGGAAGAACTGGAAACGTTGCTGGCAAC CTTGCTAAATGGTGTGGAGGAAGTTGATCGGTGTATCGCCTCGGAAGAAA CCATTCCTTTGATTAGGGGGAGGAAGGTGTTACAGGAAGTTATCCAACCG TTGCCAGGAAGGACGTTGTTGGGGGGCGAACAGGACAGCTCACCATTTTT CGCGCCTAGTCTTTTCGATGTGCCAGCAGTTTCGCTTGGAACTGTGCGCA GTGCCAAGAAGCCTGGCACCAGTCCTCCGAAGATGACTGCATATTCATTT GGGGCTGTCCAAAATGCTAGACCATCTAGTACCAGTCCGCCCAACCTGCT TGCATGTCCACTTAGAATAGTCCAGAATGCTCCAAACTCTGGTAATAGTA CATGTACTAGTATCAGTCCTCTCAACTTGCCAGCATGGTGCCTTGGAACA GTCCAAAATGCTCCAAACTCTAGTACCAATCCTCTCAATATGTCTGCACG GCCCCGTAGAACAGTAAGCGACATGTTTTCATCTAGAACAGTACAGAGTG CAAGGAAGCCTGTCGTCTCCAAGTCTCCGGAGACAACCAGCGCAGTGGAG GAGTTCATACAGAGTGTGCAACGACTTAAAGATGTCCAGGCAATGTCTTA CGTACTGTCCTATGTAGCAGTTACTTGGCTGAAATTAGATGTTCTTCTTT TTTTCTGAATATTTTGATGCACAACTTTCCTGTATTCAGTTATTGAAACA CTAGTAACAACTAGCAAACCTGGCGATAAAGTTTGAAGAAAAAAATGTTA GCTGAGAGGACCTCCTGAGAGAGCAGTATGTTATCAGAACACACATGCAC CTGCACACATGAACATGCACACATATACACAAACACATGCATACACGTGT ACAAGCATGCACGCACAAATACACACTGATACACACCTATGCAAACATGA ACACACACCTACGGAAACATGCACACACACACACACACTCACACTGACAG CAATGCAAACATTCGCACAAACACACACATACACCTACTAGTATGCAAAT GCACACACACAAACACCTGCGAATGCACACACACATACAGATACACAGAT GCACACACATGTACATGTACATGCACACATGCGCAAACACACACACCTAC ACAAACACTGCCTGCAAAGCTGGTGTGGGGGTTAAGCAGATACCTATACA GAAGAGCTACATGTATGACTACTTAATCATCTAGCACTATAGTATTAGTT TCATTTTTCAATATCCTTTGTTCCTGTTTATACACATACTCTTGTTGGTG TAGTCTTCTTCTGACACTAATAACTGACTGTCTAAAATGATATCTTGCTA TTTTGTATTATTCATGTGTTCACTTTATGTGATTTGGCAGGTCCTGTTAC AGGAACGAGGTACTTCTGATGAGCTGCCATCGCCACCATCATGGATGCCA AACCATTCCTCAGCTACAGGGACACACACACCACAACCACTGGCACAGCC AAAGCCAGCACGGAAGGAAAGGACAGAACAGCAACAGCCAGCTGTCTTCA GGGCACGGCAGGTAATATTAAGGTCAATGACTCCAGTTTGGACCTTAGAA CCCTACACTTATTGTCTGCATCTGTATTGCAAAGTTGGTATGATCACCCT TAACTTAAGGCAAGTTCAGTGAAGCGCACCAACTTCATGTAATACATGTA GGCATGATCATTGGCCTGCTGTGTTGGACTTCTATGGGGAAACTTGGTGC TGCATTGTCTATGCAAAGACTACCTTTTCTGGAACAGTACACAGTTTCTT TGTGTGTGTGTGTGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNATTAAACTTACGGTGAAGCCTTGGCGATGAC GAAATATACTGTAAAACTGAGGTACTTGTCTGCTATTAACCAGAGGTTAC AAACCAGATAAAACACTTCATCACACGCACTCATATCATACCAGTAAAGA AAGTTATACTCGTTTTAAAGTTTGAGAACCTGCCCATCCCGAAATGTTAC AATGGAACAGTCCGAACAAGGAAGGTCAAAGTTTAGGCGCTTGCTGACTT GAGCACTGCTGCACAGACTGTTTGTTGTTGTTGCTCCAGCATATCCCAGT TCGTTTAAACACTTTCAAGTAAACCCCAAGTCTTTGGGACGTGTTGCAAA AGAAGCTCTGGAATTCTGACTACAATTTTATACACGTGGGTTCACCCTTG GAGGAGACAGGAGCTCGAAGGATCCAAAATGGCGGAAGCATCATCAGAAG GAGGAGAAGGAGAGAGTCCATCACTCGATCGAAGCCTGCAGATGAACATG TTCGACTGCAGCATCTGTCTGCAGATGTTCACCCGGCCCAAGGTGCTGCC GTGCGGACACACGTTCTGTAAGGACTGCCTGGTAACGTACGTTAAAGGCG GCTGGTCCTGCAAATGCCCCACATGCAAAAGACCCGCGTACCTAAACGGA AAGAAAGGCTCAGAGGGAGTGGAGAGTTTAACGGATAACATTTCCTTAGG AAATCTTCGTGACGACTTCGCAAGTCTCACAATCATCAACAAACAGGGCA GGGAGGTTGAACGTCATGTACAACTGACTAACCAGCAAGTTTGCGTGAAG CATTACGGCATGGAAGTCAAGTTCTATTGCCCCAGCTGTGAGGAAGTTAT TTGTGGAGAGTGTATTGTTGATGAACACAACACACATGGGGTCACCAGGC TTTCCAAGGCTCTAGAGAAGCAAGCCGAAGAAGCCAAAGAACTCATGGGC GAGGGAAAGAGATGGATTGAACAAGTGAGAGGAAAGATCACAGAAACAGA AGAAGCAAGAAAGATGTTGAAGTTTGAGGAAGAGACACAATGTTTGTTAG TGAACAAAAGTGCAGCCTGTCTGAAAAAGGTGCTAACAGAATCTGTGGAT AAACGTGCAACCGACATTAAGGAAGAGTTGAACGCTTTGTTTGCGTTGAA GCGTGTAGCTCTAACAAACTGTAAGGAAGAACTGGAAACGTTGCTGGCAA CCTTGCTAAATGGTGTGGAGGAAGTTGACCGGTGTATCGCCTCGGAAGAA ACCATTCCTTTGATTAGGGGGAGGAAGGTGTTACAGGAAGTGATCCAACC GTTGCCAGGAAGGACATTGTTGTTGGGGGGCGAACAGGACAGCTCACCAT TTTTCGCGCCTAGTCTTTTCGATGTGCCAGCAGTTTCGCTTGGAACTGTG CGCAGTGCCAAGAAGCCTGGCACCAGTCCTCCGAAGATGACTGCATATTC ATTTGGGGCTGTCCAAAATGCTAGACCATCTAGTACCAGTCCGCCCAACC TGCTTGCATGTCCACTTAGAACAGTCCAAAATGCTCCAAACTCTAGTAAC AGTCCTCTCAATATGTCTGCACGGCCCCGTAGAACAGTCCAAAGTGACAT GTTTTCATCTAGAACAGTTCAGAGTGCAAGGAAGCCTGTTGTCTCCAAGT CTCCGGAGACAACCAGTGCAGTGGAGGAGTTCATACAGAGTGTACAACGA CTTAAAGATGTCCAGGCAATGTCTTACTGTCCTATGTAGCAGTTACTTGG CTGAAATTAGATGTTCTTTTTTTTCTGAATATTTTGATGCACAACTTTCC TTTATTCAGTTATTGAAACACTAGTAACAACTAGCAAACCTGGCGATAAA GTTTGAAGAAAAAAAATGTTAGCTGAGAGAGCAGTATGTTATCAGAACAC ACATGAACATGCACACATGAACATGCACACATGAACATGCACACATATAC ATACACACATATACATACACATGTAAACACATGTACAAGCATGCACGCAC AAATACAAACATACAGTATGGCCTCCGTCGGTCAGTATTGACCATGGTAA AATCCTACTTCACAACAGCCCTACAGCATCGACTATGGCTAAACAGCCCT ATACGAGAATGGCAGTATGACAAACATACACACCTATGCAAACATGAACA CGTACCTACAGAAACATGCGCACACACACACACACACACTGACAGCAATG CGAACATTTGCACAAACACACACATACACCTACTAGTATGCAAATGCACG CACACAAACACCTGCAAATGCACACACACATACAGATGCACACACATGTA CATGTACATGCACACATGCGCAAACACACACACCTACTCAAACACTGCCT GCAAAGCTGGTGTGGGGGTTATGCAGATACATATACAGAAGAGCTACATG TATAACTACTTAATAATCATCTATCACTATAGTATTAGTTTGATTTTTCA ATACTCTTTGTTCCTGTTTATATACATACTCTTGTTGGTGTAGTCTTCTT CTGACACTAATAGCTGACTGTCTAAAATGATATCTTACTATTTTGTATTA TTCATGTGTTCACTTTATGTGATTTTGCAGGTCCTGTTACAGGAACGAGC TACTTCTGATGAGGTGCCATCGCCACCATCATGGATGCCAAACCACCCTT CAGCTATAAGGACACACACACCACAACCACTGGCACAGCCAAAGCCAGCA CGGAAGGAAAGGACAGAACAGCAACAGCCAGCTGTCTTCAGGGCACGGCA GGTAATATTAAGGTCAATGTCTCCAGTTTGGAGCTTAGAACCCTACACTT ATTGTCTGCATCTGTATTGCAAAGTTGGTATGATCACCCTTAAGGCAAGT TCAGTGAAGCACACCAACTTCATGTAATACATGTAGGCATGATCATTGGC CTGCTGTGTTGGACTTCTAAGGGGAAACTTGGTGCTGCATTGTCTATGCA AAGACTACCTTTTCTGGAACTGTACACAGTTTCTTTGTGTGTGTGGGGGG GGGGGGGCAAGCAATGCAACAATATACAGTACTATCTCCTTTATGTAATC TCAAAAAGGATGTCTCTGCACAGATATTGTACATCTTTGAGACATGTCTA TGTTTTTGAGTAACAAGCTTTACAATTGGCCTTTTGTACAATGGTCAATT TTTCCTGCAAAAAATGTTCAAGAGCAGGCCTTTGATTTACACTATATGTT GTTGTATTCGACCATCCTTTCATGTGGTTGTCCTAGGAATTGTCTACACT GTTTAATTTACACTAACGTATCATGACCTATTTACGTGCAGAACCTATTT ACGTCCGGTTTGGCTCATGTCCACATGTCGCGGTGTATTATGCCAAAGCC TGTTCTCANTAACGTAACATGACCTATTTACGTGCAGAACCTATTTACGT CCGGTTTGGCTCATGTCCACATGTCGCGGTGTATTATGCCAAAGCCTGTT CTCATGAGCAATAAAGAACATCATAAGTATGATCCTTAGCCATCTCTTTA ATTTTTGCACAGCAAAACATAATGGCCATGCGTTTACCACGTGAACGCCA CGTGCCGCGCATGTGGGGGAAATTTACAGATAAACATTGTTTTTTTCCAT CGCGTTAAGCAAGTGGCCGGACAGACATAGTGATTTTACTATCATTTGTC TGCAGACTACTTTGGACAGTCACTGTGCATTTTTTTCTGGTCAATGTTCT TCAAGCATAGCGCTAGAAGGGAAAAGATTCAGAAGTGGACGATAATGGGT TACCCTAGCACAATTCTTCATCATATACCTCAGTATAAATACATGCTCGC ACGGCATTAAACAGGCGGAGAAAAACTTACAGACCATGCATTTTCTTTTT AGAAGAGCTGATATTTCTGCCCATGGGTTTGAAATTTGGCTCTGTCCGCG CGGTTTTAAGATAAATACGTTTTGAATAAATTGGACGTTAACTGGTCACC TTACGTTATATGTTGTTGTATTTGACCATCCTTTCATGTGGTTGTCCTAG GAATTGTCTACACTGTTGCAGGGGCAAGGGCCGCGCCGTCAGCTACATGT TAAGAGAGGTACCAAGAAGGTCGTCAAGCCCAAGGACGCCGTCGCAAAGA GCCTCATTTCCGAGGTTCCTCGTAGGGGTAACGGAAATGGAGGCAGTGAA CCCATCCCACCCAACTCAGACAGTTCTGATGCCAGCAACTCCCAGGTTGG TACTCACTTATTTTCACCTCAGTGCATGGAGGCTTTGTTTTCGGGGTGTC AGTTTGATACGTTGATGAAGGTTAG

Coding sequence (CDS) from alignment at Sc0000301:88303..95677-

>Blg00623.20 ID=Blg00623.20|Name=Blg00623.20|organism=Branchiostoma lanceolatum|type=CDS|length=1431bp|location=Sequence derived from alignment at Sc0000301:88303..95677- (Branchiostoma lanceolatum)
ATGGCGGAAGCATCATCAGAAGGAGGAGAAGGAGAGAGTCCATCACTCGA
TCGAAGCCTGCAGATGAACATGTTCGACTGCAGCATCTGTCTGCAGATGT
TCACCCGGCCCAAGGTGCTGCCGTGCGGACACACGTTCTGTAAGGACTGC
CTGGTAACGTACGTTAAAGGCGGCTGGTCCTGCAAATGCCCCACATGCAA
AAGACCCGCGTACCTAAACGGGAAGAAAGGCTCAGAGGGAGTGGAGAGTT
TAACGGATAACATTTCCTTAGGAAATCTTCGTGACGACTTCGCAAGTCTC
ACAATCATCAACAAACAGGGCAGGGAGGTTGAACGTCATGTACAACTGAC
TAACCAGCAAGTTTGCGTGAAGCATTACGGCATGGAAGTCAAGTTCTATT
GCCCCAGCTGTGAGGAAGTTATTTGTGGAGAGTGTATTGTTGATGAACAC
AACACACATGGGGTCACCAGGCTTTCCAAGGCTCTAGAGAAGCAAGCCGA
AGAAGCCAAAGAACTCATGGGCGAGGGAAAGAGATGGATTGAACAAGTGA
GAGGAAAGATCACAGAAACAGAAGAAGCAAGAAAGATGTTGAAGTTTGAG
GAAGAGACACAATGTTTGTTAGTGAACAAAAGTGCAGCCTGTCTGAAAAA
GGTGCTAACAGAATCTGTGGATAAACGTGCAACCGACATTAAGGAAGAGT
TGAACGCTTTGTTTGCGTTGAAGCGTGTAGCTCTAACAAACTGTAAGGAA
GAACTGGAAACGTTGCTGGCAACCTTGCTAAATGGTGTGGAGGAAGTTGA
TCGGTGTATCGCCTCGGAAGAAACCATTCCTTTGATTAGGGGGAGGAAGG
TGTTACAGGAAGTTATCCAACCGTTGCCAGGAAGGACGTTGTTGGGGGGC
GAACAGGACAGCTCACCATTTTTCGCGCCTAGTCTTTTCGATGTGCCAGC
AGTTTCGCTTGGAACTGTGCGCAGTGCCAAGAAGCCTGGCACCAGTCCTC
CGAAGATGACTGCATATTCATTTGGGGCTGTCCAAAATGCTAGACCATCT
AGTACCAGTCCGCCCAACCTGCTTGCATGTCCACTTAGAATAGTCCAGAA
TGCTCCAAACTCTGGTAATAGTACATGTACTAGTATCAGTCCTCTCAACT
TGCCAGCATGGTGCCTTGGAACAGTCCAAAATGCTCCAAACTCTAGTACC
AATCCTCTCAATATGTCTGCACGGCCCCGTAGAACAGTAAGCGACATGTT
TTCATCTAGAACAGTACAGAGTGCAAGGAAGCCTGTCGTCTCCAAGTCTC
CGGAGACAACCAGCGCAGTGGAGGAGTTCATACAGAGTGTGCAACGACTT
AAAGATGTCCAGGCAATGTCTTACGTACTGTCCTATGTAGCAGTTACTTG
GCTGAAATTAGATGTTCTTCTTTTTTTCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00623.20-exon-Sc0000301-1570713199:93369..95677Blg00623.20-exon-Sc0000301-1570713199:93369..95677Branchiostoma lanceolatumexon
Blg00623.20-exon-Sc0000301-1570713199:89827..89978Blg00623.20-exon-Sc0000301-1570713199:89827..89978Branchiostoma lanceolatumexon
Blg00623.20-exon-Sc0000301-1570713199:88303..88556Blg00623.20-exon-Sc0000301-1570713199:88303..88556Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00623.20Blg00623.20-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000301genomeSc0000301:88303..95677 -
Properties
Property NameValue
GeneIDBlg00623