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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000646:563..8924- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00596.0 ID=Blg00596.0|Name=Blg00596.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8362bp|location=Sequence derived from alignment at Sc0000646:563..8924- (Branchiostoma lanceolatum)
GAGAGGGTTAGTCTATTCTCAACGCTCTAGCCTTCGTATTCGTGAGTTAT
ATTCCATGAAATTTACACACAGTGTACAAAAACATATAAGTATTACCATT
ATAAAGTTATTCTGTGAAAGTTTGGGGAAAAATATACCAAAAATGCCGCT
GGAAAAATTTACTTCCAGATTGCGGGTCACTGTTTGATTGTGACGATTCT
AGTGCCTACAAATTTGAAAATATTGCCCAAATCTTGGTCGTAAACAATCA
CCTGGGTACCGACACATGTCTGTTATCATAGATTTGCTTAGATTTTACCA
AAAATAATTGTTTTCTTCTGTGCACGTTAGTGAGGCGGAAACTCTGGTGA
ATACGTCAGTTTTCAGACTGTACGGGCTGGATTACGATGTTTGTTCGGTC
GGCTTGGATTGGCGCCTGAATACTGTTACCGTCCAACTACTTTGCGTCGG
CTGCAGTATTATGACCTCCGCTGGGGGTCATATCAAAGTGGGTTTTAAAA
GAGAACGAGCCGGCAAATTCAAGCTCATTTTCACATATTTTGTAGATTGA
ACCCTGAAGTCAACCATATCAAAATCTTGCACCTTAATTGATTGTGCACT
CTACTATAAATTTCGAAGCGTCGAAGCTTCTCACTTTTGGGGTCGTTAAC
CATGTAAATCCCTATAGGTGAAATACTGCGGTCTACGACATTGAACTGAG
ACGCAAACCATACTGTTAACAGTTGGCAAATATAATTTTCTACCGCGCAG
TAAATTTTCTTGTTCAGTTTTACTGATCATCAGTTGTTGATTTGATATAC
ACGGATACTGTGTTATCCACATACACCAGGGGTATTCGATTGACACGTGT
TTGTAAACTCNTTCGATTGACAAGTGTTTGTAAACTCAAACTGAAACATT
GACAAGTAACTCAAGTGGGCCATGGGGTCAAAAGGCCATCCGAGCAGCCA
TCTGGGTGAGCGTACAAGAATGCAAGGAAGTGTTGCCTGAGGTAGGCGGT
CAATCTCATGGTGATTCATTTTGTGATAGTTTTTGTGATTTGCCACGGTT
CGAGGATGTTCATGTTAATCTGGCATTTTGGACGTAGGTCAGTATGTGAG
TTCTCGCAGGCTTTAATTTAAATCCGGCATTCCCCATTTTTTTTTTTTGG
TGGGGGCCGGGGGTGCATACCGCTGCTTGTGCCGTGACATCATTGTTCCT
CGTGTATCTAGGAATTCGACATGGCTCATCACATCCTTATAGCAGTCCTT
GCTGCGCTGTTGACCTCACCAGAAGTAGAAGCCGTGGCTGATGTGACGAC
GCCGGCAGGACGAGTTGTCGGGCTAGAGTTGGANCCAGCAGGACGTGCTG
TCGGGCTGGAGTTGAACGTGCTCGGGACGACAGTTCACGCCTTCCTGGGA
ATCCCGTTCGCACAGCCGCCAGTCGGAGAACGGCGGTTCAGACGGGCCGA
ACCCATGGAGCCATGGGACGGGATATACAACGCAACAAGGTGGTTGTCAT
TAGTTTCCTTCGCCGGGAATGTATGCATTCGCGGTAAGGTTATGTTATCG
GTTACGCCAGCTGTAAAGTGGGTCCGTATGTATGTCGAGATCATAAGTCG
AGAGAACTTTGACGGATCTTGCTGATTTTTGGTAGGTAAGTGGCGGTTGT
GGGAACGAAGGTCAAGTTCGAAAATGGTTAACCTGGCGTTTTCCTAAAGT
GCTCCAGTGGACTTTTTTTGTTAGTGTGTTTGTATGTAGACAACATAACT
CGACGTATTGATGATGGATCTGCATGATTTTTGGTGGGTACGTAGAGATT
GTGAAAAGGAAGCTCAAGTTCAAAAATGGGCCACCTNCAAAAATGGGTCA
CCTGGCATTTTCCTGCGGTACTGCAGTGGGCTGTTTATGTATGCGTATTT
GTTTGTTGACAGGATAACTCGAGAAGCTGTTGATGGTTATGCATGATATT
TAGTGAATAGGTAGATTTATTAAAGGGGAAGGTCAAGTTTGATGCTGGGC
CTCCTAGCGGGTACTTTGGGTACTGCAGTGTAGCTTCAAAGTTTGAGGTC
GAATTTTCTGCAAGTGCTACGGTCATGATTTTTGTGTGGTAGATAGTCCA
TGCCACATGAAGTAAGTTGTGCACGTTTGGGCCCTCTAGCGGCTTGTTTG
GAGCTGCAGCGGGTGTTTTTAATTTATTTGTTTTGACCTTTGGACATGAA
TAACTAGACTTATGGTCAACGGATCGTCTTGATTTATGGTATGTAGATAG
CTCGATTAATGATTTACATAATTGAATATTCATTATGCAAATCAGGAGCT
AATTTGCATAATTAGCAAGGAAAGTTTATAAATCTGCTGCCTTTCAAAAT
AGGACTCTCAAACATGTGACATATATAGCTGAAAAAGAGAGAGGTATCGA
TAGATACCAATAATGCTAATAGCTACCTATTTTGCATAATTAATGAGAAA
ATACTAATTGAAAATACCACAATAGTAAATGATTGGAATTTCATTCTTGT
ATCATTAGGAAGCTAAGTAAAGGTGAACAATATCAGACAAAAATCATGCA
TGACAAGGCCTCATTAACATAATTTATAAGGAAATGTCTACAATTCCCTT
TCAATTTGCTATTTTTAAGTCTATATATTCAGGTTAAATTGCACTGACAG
GTGACCTAGTTTACCGGAGCAGGCTCCCTGTGAGACGTCCCTGGAGGACA
CATGTGATACTTTACTTGCCTGGGGCAGGGCTCTGTTTTGGGGTCAGGGA
GGTCACACGGGCATTTAAACACAGCAGCCTTACGATCTAACGCTCTCCCT
GTTGGAAGGTATAGGTTTGATAAAAACTGATTGATATGTCGACTATGAAA
ATAAGGGCATAATTGAAGCAAATACATTGCCAACAAATTGCCTTATTTTC
TGTAGTAAAGATAAAAGTTATGATACCAATTAAGCAAAAATATTCTTACA
GTGATTATTTTTATAACTCTTGGGAGAACTCGTGTAGGTATAGGTATGGG
TTTGTTTTAAACTTTGAAAGAGAATACTAGTAACTCAAGAAGGTGATGAC
GGATCGTCATGATTTGTAGGGATGTACATAGTTTGAGTGATGATTTACAT
GATCGTATAAGAATCATGCAAATCAGGATCTGTGATGTGAAAAAGTATAC
AAACCCTTGCATTCCATTGTAGTCAAACACGCGACATGTAACTGAGAAAG
AGAGGAATATTGATAGATATCAATTATGCAAACGAATACCTAATTTGCAT
AATTTATGACAAAATACTATAATTCCAGAGTGGTAAATGATGGGATTTCA
TTCTTGTGGCGTTTGGGAGATAATCAAATGTGGACGTTATCAGACATGAA
TCATGATGGCCTCATTTACATGATATATGAGGAAATGCTAAGATTTTACT
TAAATGCTGTGTTTTCTGTAGAGAAAAGGATCACTTGAAATTCATGCAAT
CGAGGACCTTATTTACATACTGAGTGATAAGCATTCACTCGAAAAGGCTA
ACATCAGTCGGCGAAGGTATGAGGTCGTGGAACTCTAGTTTATATAGTGA
CATATGTTCTGATATAGATGGAAGAAGGGGAATTTATCACAGTGTATCAT
AACAAATGATAGGCCAGGAAGCTGTCATCAGCAGTAAAATTCAAGACTAG
GATAATTCATAAAGTGATTTTCCTCTCCTTAGGAAGCCAAATGCCTGCAT
CCAGGATGTCGCCGTCTTCGGAAGACAAGATAGCATCTACAACACCTGGA
TGCCAGACGGACCAATCAGCGAGGACTGTCTGTACCTGAACGTGTGGCAG
CCAACTCCCGTCCCCACCGGAGCCGCCGTGCTGGTCTGGATTCATGGAGG
GAGTTTTCAAGTGTAGGTTTTACACAAGACTAATTGTTTCTTGTCTGTAT
AACGCAAACTCCAGCTGTCCGGGGGTTTCTCTCCCCTGGGTTGCGTGGTG
GTTACAGGGCCGCGAGTGGTCACAAGAGGCTTGATTGAATTCAGGCTAAA
TTGTTTCGTGGTTGATTGCATCAGCTTGATTTTACATGTAGATGTTTCTC
TTATAGACATGCATGATTAGTGTCTTCTTCTAAAAACTCGTCAAGGCCAT
ATGTTAGAATCAACTTTACTTAATCGGTAGATATGTAATCATAAATAAAT
CATACAAGAAATATCTAAGTTTTCTACCTTGCTGTGTAAGCGCCACCATG
TGGGCTATGTCAGTTGTTTATCAACAGATATGCTATCTAAAGCTGGTTAA
CCGTCGTCACTTCAGACGGAATTGTTTGGCAATCCTGAATGTCTGGTGAA
ATTCTTTTCAGCGGTTCTTCGGCACTTGAATTGTACGATGGAAAGTACCT
TGCAGCCGCGGAGGGAGTCGTCGTGGTGGCCGTGAACTACCGAGTCAGCA
CGCTGGGGTTCCTGTACACTGGGACAGAGGGCGCTCCTGGGAACATGGGG
CTCACGGATCAGGCCATGGCTCTCAAGTGGGTGAAAGAAAACATCGCGTC
ATTCGGAGGTGACCCCAGCTTGGTGACACTTTTTGGTGAAAGCGCTGGCG
GGATAAGTATCGGGTATCTTCAGATGTCGCTGGACAGCAGAGACCTCTTC
AATCGCGGCATCGTGCAGAGTGGGGCCGTGGTGATGCCGTGGGGCCGAGA
TTCCGCCTCCGCTGCGTACAACAAAACAATACGCTTCGCAGAAAGCGTTG
GGTGCCCATCGGACAAAGGCATGGACGCTATCATCGCTTGTCTTAGACGG
AAGGACGGACAGAACCTTGTGGATACATCTGTGTTGAGAGATACATTTTT
CTTCCCTGTCATCGACGGAAACTTCCTCATGGAAAACCCCGGGGACGCCC
TCAAAGATGGCAACTTCAAAAAGGCGGATATTCTGATTGGATCGAACACA
AATGAGGGAACTATTTTCTTCGCCAACAACATCGCCACCAAGGAACAGTT
CATCAAAGCAGTCCAGTACAGTATTCCTGTGTTGAATGAGTTTGCAATGG
ATGCAGCTGTCTACCAATACACGGCGTGGTCACAACCAGAACGAGAAACC
TTGTACCAGGATGCATTATACCTTCTCTATGGAGACTACTTCGCCTTTTG
CCCCGATGTAACCACTGCGCGTGCTCACATCCGACAGGGGGCGGCGACAT
ACATGTACGAGTTTGCTCACCGAGCATCGAACTCGGCATGGCCTGACTGG
ATGGGAGTGGTCCACGGAGCGGAGATGGAGTTCGTGTTTGGCCGGCCCCT
GGATGCTGCCTTGGGGTACACCGCGGAGGAAGTCGAGCTGTCTCGCAGGA
TCATGCGTCACTGGGCAAACTTCGCCAGAACGGGGTAACTCCTACTTTCC
TTACCCTTTTCTTGCAAAAAAAAGAAGACATATGTCTCCAGTACCTCGCA
GTGATTCTGTACGATATGACGTATATATTTGTTACAGGGGCTGCTCTAGC
TCTGTCGAAATTAAAGCCTGCCGGTTATACATAATTTAGATATTAGGTTT
CTCAACATTGTACGTCAACTGTAATGCTAAAATCCTAAAATAGGCACGAC
TTTGCCCTGATCATTTTCGCAGTAACCCCAACAACAACAACAACAACGAG
ACGACATGGGTCGCCTTTAACCAGACCGACGGAGGCTACACGGTGTTGGA
TACGCATGCTCCTCGCATGAGGATGGGTCCGAGGTTCGCCGCGTGCGACT
TCTGGGAGAACTACGTCAATCCGCTCATGACAAAGACAGGTTTGTTCAAT
CACAACAACGTATACAAATATTTACATTGGTCGGATGAAATGGTTTCAGA
TGTCCCCCCTTCTTTTTTATAATGCAGTTGAACTCAAGTCAGTTTTGTGG
TTTTACGGATAATCTTTATTTATGTTAGACTGTAAAATGTACATACATAA
ATGTATACTTTACGTACACTACCATTAGGAAACAAGAGCTAAATCTTCAC
ATACCATGGACATGTCTATGACGATGTCCATGTATACATTGTTGACCTGT
TAAATGTCTATTACAGACGCCCTGATGATGAGTCGGTCCTGCGACCCCGC
TACTTCAGACGCCCGTGCCGACAGCAAAGCTGTATTTTGGCTACTGCAAC
TGAGCCTTTCTAATTTGATCGCTGTGTTCTTTTATACTCTGCATGTCTAG
TTGCTTCCAAAAGAAGACACCTACTCATCAAGTGTAATGATAATGAAAAG
GAATGCAACAAATCAACGCGTAGTCCCTGGCCCGTGTAGCATTTCATGAT
GCATACATAGATTACCATATCACGTGAAACATAAGCTAAATCCCCAGATG
CCATTGGCAGGTCTATGAGGATGCCCGTGTATACATTGTCCTGCGATCCT
GCTACTTCTGACGCCCGTGAAGCTGACCAATCCTGGCTAAAGCATGAGCC
TGACTACTCTGACTGTGATATTACGCCTGATTGTTTTGCACTCCTAGTTC
CGTCCAATGCTACAAAGACGTACGTCCAAGAAACTATCAGTTCGTATCTG
TTTATGACCGGCACCGCTAATCACACTTATACTGTACACGTGGACGCAAA
TGAGCACAACGTCCAAATGCACGATTACGTGAGAAACATTTCCCTTTACT
TTAATATGTATAACAATATAAGGGACACATGTGTACGAGCAAGGCTTTAC
ACTGGCTAAGGCTTTTCACTGGCTAAGATACATTCCCGGCCTTAGGTAAC
TTAAAGTTTCAATCCATTGTCCAAAAAATAATGATCAACCACAGGACCCT
TTTTTTCAGCAATCTATCAATTTAAGGGTGTGATATCGGCCAGGCCAAAA
CTAATCTATTCTGTGCGACAAACCGGCTTTAAATTGCGTACGACGATTGT
CTACAGACCCATTTTAATTAAATCTGATCTCCACCAATATGCATGAAGAG
CTACAAGAGAGCCACAGCAGCCATACAATACGCCATTGTCTATGAAGAAC
GGGGTGGAAAAAACTAGATACCGACTTTTTTCAGTCTGATATAGAAACAA
GTATTCCAACAATACAATAGACTAACTACAACACAACGATACATGTATAA
AATACGTGTACAAAGAAAGACTTGCACAAACACCAATGTATTTTTTTCAG
TTATTATTGTATTTGTATATACAGAGACATTCTTTGTCTAATCGAAACAA
ATATGTTTAATTCCTTTATACATAAGAATTCCCATTGGACTGTATTTATT
TTGATGGCTCTGTGCTTGTCCACATTACGATGTACACATCACTATATATT
CCTAAGTTCTTCCGAATATACATTTGTATTGTCAGCCTGTTATTCGTTCA
CAGCACAAAACTAAACATCAACCATACTGATTAAAGTCCACACGTACGGA
TGGGTCTACAGACACTATATGGACAGAAACAATTACTTAGACTGATACAT
TGTGTGGACTGGATATCAGTATCCACTGTAATAAGCACATATCAATACAT
AGGAAGAACCAGTAATGCTGTCTGACATTCCTAGTTTATATCAATAAACT
TATTATCCGTTAATCAAGTTAAGATTATTTCCATGTGCCCATTGGGAAAG
ATGCATTGATGGTAGCTTTGATCCACCATCGCAGGCTACAGTTAACGTTA
CATGTTCAATATCCACAATCGTTTGTCATTTCTTGAACCGAGGGAAATGA
CCAGAAGGGTCAGTGGGAGGAGGATGGCTGCTTCTGGAATCAACGTCACA
CAGAACTCAGAAACATAAGTGTTAGTTTGCTGGATCAATAATGTGAGAAT
ACAGTGACAGTACTGTTTTGATAGCTTGCTACTACCAGCTGCCCACCCGT
AGCTACTGCCACGCTGTCAGCCTGGAACATGCCGGAAACGACGCGGCGAA
CGTACCGCCCGTCTTTTGTAAACAGCTCCACCGTCCCGCCTGACCCGGTC
GACACGAGAACGTTTCCTGAACTGTCCGTACAGATTCCTGAGACCTCTTC
GGCCTGACCGTCATCGATTTCTATCTGACCCTCACCAATTTTGTCACCCC
CCAAGCTAAAAAGGTAGTGACCAGTGTTGTTATAGACATACACTCGTGTA
TCCCCCAAGTGGTCGGAAAAGAACAGGTTTCCCTCCCGCCCCACAGCGAC
CCATTCGGGGCACTCCGGGTCTTGTCCCGTCCTAAACTTGTGAACGACCG
TGCCATCGAAGTGCAAAAGCTTTACTTGCCCATACTCAAAGTTCCCCCAT
GCATCTTGCCATGACACCGTTATTACGACAATACGACGAATTGTGTCTAC
CGCCATGCCCAACAAAGAACTGTTGGAGAATGTTACCTGAAGTGTTGTTA
TGAGACGTCCCATTTTCGTATACCGAACGATAAACCCTGTCCAAAAGTCA
TCTTCCCCAAGC Coding sequence (CDS) from alignment at Sc0000646:563..8924- >Blg00596.0 ID=Blg00596.0|Name=Blg00596.0|organism=Branchiostoma lanceolatum|type=CDS|length=1539bp|location=Sequence derived from alignment at Sc0000646:563..8924- (Branchiostoma lanceolatum)
ATGGAGCCATGGGACGGGATATACAACGCAACAAGGAAGCCAAATGCCTG
CATCCAGGATGTCGCCGTCTTCGGAAGACAAGATAGCATCTACAACACCT
GGATGCCAGACGGACCAATCAGCGAGGACTGTCTGTACCTGAACGTGTGG
CAGCCAACTCCCGTCCCCACCGGAGCCGCCGTGCTGGTCTGGATTCATGG
AGGGAGTTTTCAAGTCGGTTCTTCGGCACTTGAATTGTACGATGGAAAGT
ACCTTGCAGCCGCGGAGGGAGTCGTCGTGGTGGCCGTGAACTACCGAGTC
AGCACGCTGGGGTTCCTGTACACTGGGACAGAGGGCGCTCCTGGGAACAT
GGGGCTCACGGATCAGGCCATGGCTCTCAAGTGGGTGAAAGAAAACATCG
CGTCATTCGGAGGTGACCCCAGCTTGGTGACACTTTTTGGTGAAAGCGCT
GGCGGGATAAGTATCGGGTATCTTCAGATGTCGCTGGACAGCAGAGACCT
CTTCAATCGCGGCATCGTGCAGAGTGGGGCCGTGGTGATGCCGTGGGGCC
GAGATTCCGCCTCCGCTGCGTACAACAAAACAATACGCTTCGCAGAAAGC
GTTGGGTGCCCATCGGACAAAGGCATGGACGCTATCATCGCTTGTCTTAG
ACGGAAGGACGGACAGAACCTTGTGGATACATCTGTGTTGAGAGATACAT
TTTTCTTCCCTGTCATCGACGGAAACTTCCTCATGGAAAACCCCGGGGAC
GCCCTCAAAGATGGCAACTTCAAAAAGGCGGATATTCTGATTGGATCGAA
CACAAATGAGGGAACTATTTTCTTCGCCAACAACATCGCCACCAAGGAAC
AGTTCATCAAAGCAGTCCAGTACAGTATTCCTGTGTTGAATGAGTTTGCA
ATGGATGCAGCTGTCTACCAATACACGGCGTGGTCACAACCAGAACGAGA
AACCTTGTACCAGGATGCATTATACCTTCTCTATGGAGACTACTTCGCCT
TTTGCCCCGATGTAACCACTGCGCGTGCTCACATCCGACAGGGGGCGGCG
ACATACATGTACGAGTTTGCTCACCGAGCATCGAACTCGGCATGGCCTGA
CTGGATGGGAGTGGTCCACGGAGCGGAGATGGAGTTCGTGTTTGGCCGGC
CCCTGGATGCTGCCTTGGGGTACACCGCGGAGGAAGTCGAGCTGTCTCGC
AGGATCATGCGTCACTGGGCAAACTTCGCCAGAACGGGTAACCCCAACAA
CAACAACAACAACGAGACGACATGGGTCGCCTTTAACCAGACCGACGGAG
GCTACACGGTGTTGGATACGCATGCTCCTCGCATGAGGATGGGTCCGAGG
TTCGCCGCGTGCGACTTCTGGGAGAACTACGTCAATCCGCTCATGACAAA
GACAGACGCCCTGATGATGAGTCGGTCCTGCGACCCCGCTACTTCAGACG
CCCGTGCCGACAGCAAAGCTGTATTTTGGCTACTGCAACTGAGCCTTTCT
AATTTGATCGCTGTGTTCTTTTATACTCTGCATGTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00596.0-exon-Sc0000646-1570713199:7609..8924 | Blg00596.0-exon-Sc0000646-1570713199:7609..8924 | Branchiostoma lanceolatum | exon |
| Blg00596.0-exon-Sc0000646-1570713199:7436..7583 | Blg00596.0-exon-Sc0000646-1570713199:7436..7583 | Branchiostoma lanceolatum | exon |
| Blg00596.0-exon-Sc0000646-1570713199:5063..5242 | Blg00596.0-exon-Sc0000646-1570713199:5063..5242 | Branchiostoma lanceolatum | exon |
| Blg00596.0-exon-Sc0000646-1570713199:3591..4613 | Blg00596.0-exon-Sc0000646-1570713199:3591..4613 | Branchiostoma lanceolatum | exon |
| Blg00596.0-exon-Sc0000646-1570713199:3186..3352 | Blg00596.0-exon-Sc0000646-1570713199:3186..3352 | Branchiostoma lanceolatum | exon |
| Blg00596.0-exon-Sc0000646-1570713199:563..2908 | Blg00596.0-exon-Sc0000646-1570713199:563..2908 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000646 | genome | Sc0000646:563..8924 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00596 |
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