|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000273:184371..189931- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00587.0 ID=Blg00587.0|Name=Blg00587.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5561bp|location=Sequence derived from alignment at Sc0000273:184371..189931- (Branchiostoma lanceolatum)
CATATATTCCGTGGCATTACGCCTAACCACGCGTATATTAGGCGTTCCCT
CCCTCTGGCCCCGACATTCGGGGTCACAGTACCTAAAGAGGGAGCTAAAC
AAACCAGACGGTGCCCGTTCTGTGTCTTTTAACATAACAAAAAAACGCTC
TCCTCCTAGCTCATTTAGAAAGGCCCGTGGTGGGATGGTTGGCTTTGTAC
TCTGACCCCGAAGCAATCCATCCCTGCCCGACTCTTTCCTGTACTGCTCA
CCCAAGCACGCCCCACGTCTTGGCCTGTACGGCTCCTTATACTCCCAGAA
CAAGAAACCAGACTTGTAAAAATCATCAGAAAAATCGTGACCAAAAGAAA
ACACATCTCTCAGGCCAACAATACATGTTTGATTAGTGGTGACCCACGGG
GAGTTAATTATTTTGCAATCAACTACTAAATATTGTAAATCAAACGCTAA
TGGCTTCCTTTTGATGAGATTAACACTCTTGAGCCGCTTCACACGTACGC
GATAATATACTCGACATGGAGTTTATGGAGCTGTGTGTGAGGGGTGTTTG
TAAAACAAGGACACCGGGAAACGCCTCGGATTGGCCGGTGGGATTCGAGA
CCGGGTAACTTGGGACAGGCTGGCGTCAGACAGGGATTTTGATATATATT
CCCTCTGATCCCAAGTTTATTTTCACGGCTACAGAAAACGCTTGAAAACT
CCACTTGGCTGGTTGGTTTAAACGGCGCGGCCGGGCACATTTCAGCACTT
GCCCGCCCGCCATAGCCATCAGAGGGCTAGTTATTTTTTTCTCCACGGTT
GTTAATGAAGACCAGACCGGGAGATTTTCCGCACAGATCTCTCCCACCGA
GCGAGCGACATTCTTGGGCAGGAAGCAACTGTTTCTTTCCTCGTGTGAAA
TTCCGAAAATCGCCAAAGTAAAACTCGGGTACTCCTCCTCAAAAGTGTCG
AAACCTAACTATCTAGAAAGATGTGTCAACACGTAGGTGCGAAGTGTGGG
GACAACCAATTAGATAAGAAACGCTAAACTCCTTCGGAGTTAGTTCATGG
CAAATAAGAAAACTTCTCTGGTCGAGAAACGTGCTTGTGAGACAAATGGA
TAATGTAAACAGCGACTTCCCATGTCGGACAGGGGGGTCACATGGCGGGA
CCCTCTACATGAATCATTGTACTGGATACCCTATACCACAGACTGTATGA
CAAAATAAACCCAGAAAGAGTGCTGGAAGAAATGTAATATCCGTCCCAAA
CCGGGCGTGAGGCGTGCCACTTTTGGCGGGCGGTGTCAGAGGCGTAAATT
TCCCCCCAACCCCTCTGTCCCTGTCGTCTGACTCTCGCTATTTTAGGTAA
ACAGATGGCGGACGTATATTTAGCTTTGTTTTTACAGGTGCAGATTCATG
TATTGCCTTCTATATAGCTTTCATGGCGCTGTCTGGAGGTCTTTTGGGTG
CACTTCTGACTGACCAAGTGGGCCTGTCATTTATCGTTCCCTCAAGTGGA
GTGCCAGCGTCTTGGATGGGAGACGTTGAAACGGATACTCCTTAGAGTAG
GAAGTCTTGAAAGCCCATGCCAATATTCTTCGCAACTGCGTTTGTTATTC
CAGAGGATGCGAGTAAGAGGGAGACAATGAAAAGAAAAACAATCAACAGA
TCGGGCTTCAAGATAAGAAACCCGACACTTTATTTGTGAGGCGAGTTTTG
CAGACGTGACGTGAGTGGGAGGAGCTAGGGGCCCGACTGTACATTTGAGA
AGCGGCCAGATCATATTGATTTCTGACCCGGGGCCGTGGCTGATACCTTA
TACTTACTAATACTGAGTCCGATCTACGTATTGGTTCCGGTATCGAAACA
GCTGTTTTGTCAATAAGAACTGTGAAACGAAAAAGCATTCCAACCATGCC
GGTGATGTACTCTACCTGTCAAACATTATCTCTAATAACATGTCCGTCCA
TTTGTGTCTAGCCCATGGCGATGTTTATCTCGTGCTTGAATCGTGGGAGG
GGCGAAAGGTTCTCGGATTTCCAGGCCGTCCCAAATGTTCGACTCCTCGG
GGTCCCCGTCTGTCTATCAAAATCACAGTTGTGTTCCCCCCGCCTGGCAC
AAACAAGCCTGGTCCCGCCAGAATCCCGCCCGGAGCCACCAGCCACCACC
CGGGCTATTCAATCCCTCATTATCTCGAGAGCAAACAGCCCATTGGGCCA
TTGTCGCGAAAATAATTAGATAGGGTGTGAAGTTTTCGCCATGTATTCGC
CATGTTATTCTATCTATTTTCCCGTCAATTAGCTGACTGTTGTGACCATC
GGTCAGGTGTAAGAGGAGATGGGGGACAGAGTGGTGTGGAAATAAACTCA
GAACTCTGCGCGCTCTATCGTTCCAGCTACGGCTGAGATACTCTTTTGAC
ACCTAAGTGCATCTCAGGTTACATTGATTGACATTGTCGCCATAGTGAAT
AATTTAGTAAACCATTGGAATAATATCGATATATCCGGCGCGCACACTCC
TGACCAATCACGGCAAAGCAGCTGGCTATTAATGTCGCCCTAAAATAATA
ATGTCAAAAAGTAGCAACCCCACACGTTGGCCTGTTTGTAGTGGCGTTTT
TTCCCGGCTACACACACACACACACACACACACGCACGCCGGAGTTGTGT
GTGTAGCGTTAGCACAGTAGCAGGTAGCAAGCGGGCGGACAAGCCGGTCG
GATCGCTTCGGGCTCAACCGTGGGGACGCCATGCTACCTTCGTTCGGGTT
CACCCAGGAGCAGGTCGCCTGCGTGTGCGAGGTCCTGCAGCAGAGCGGGC
AAATCGAGCGCCTCGGCCGCTTCCTCTGGTCGCTGCCCGCCTGCGAACAC
TTACATAAAAACGAGAGCGTGCTCAAGGCAAAGGCAGTGGTGGCCTTCCA
CCGAGGAAACTTCCGGGAGTTGTACAAGATCTTGGAGAGTAACCAGTTCG
GGCCCGAGAATCACCCCAAGTTACAGCAGCTATGGTTGAAGGCACATTAT
ATGGAGGCCGAGAAGTTACGAGGCCGGCCGCTCGGCGCCGTGGGGAAGTA
CCGGGTCCGCCGAAAGTTTCCGCTGCCCCGTACCATCTGGGACGGCGAGG
AGACCAGCTACTGCTTCAAGGAGAAGTCCCGGGGCGTCCTACGGGAGTGG
TACGCGCACAACCCGTACCCTTCCCCCAGAGAAAAGAGAGAGCTAGCCGA
GGCCACGGGCCTGACGACGACCCAAGTCAGTAACTGGTTCAAAAACAGGC
GGCAGCGGGACAGGGCAGCTGAGGCGAAAGAGAGGTAAGCCTACCGCCAC
TACCATTCATTCGTTACATGCTACACAGTGCATGGAACTAGTGTCACTAT
ATAACGTACACAATGCCATGGAAATATATCCTTTAGTGTCAGTGCAAATA
CTGAACGTTTCTTGAATTGAGTTACAGGTTAAGGTTGCCTGTAAACTTAA
AACACGTGAACGCAAGGCAATGTCTCGTTGAATAAAATGTAGTACAAGAG
CACCTCTTGAGTCTTTGTAAGTTCTCTATGTTCGCGAAACAGTAAGGGTA
AACATGACCGAGTTTCGGTTGGCTTTGTGTGCATGTGGGCACATTTGTGT
GTCCAGAAGCCTTCATAAAACAACATGTTGGGTTACCTTGTATGTACCTG
TCACCATTACCACAACAACAGCAAGGAAAACGTATTTGTGAACCAACAAG
TTGACCGATGTTGCATGTTGCAATCCACGAAGTGCGCTAGCCGCCATTTT
TGTTCTAACACACGAGGCAGTTAGATATACGCATGCATGAATTTTCCCTA
CAGTTATAACTGAACTGTATAAACTGAATGTTACAGATTATTGTTTAAAA
CCGAGTAGACGTGGAGGTACAAGAAAACGCTTGGATTGTAGCCAAAATAG
TGAATTTACCGAGGTCGTGTATACCCATAGCAGATACACTGTACACCTGT
AATATTCACAATTTCATATCATAAAATTCCCCACTTTCATGAACATCTTC
AAATACTTGGGGAAAATATTTGAATAATGTTTCCAGTCTTCAGAAAAAGA
AGAACAAATGCCAACAGGGTTTGTTATCAGAATATTCATGTGTATTGGCT
ATGTTCAGATGTATATGCAAGCGGTATGGTTGGGACTGTTGTATTTGGTT
AACTAGCAGAGTAGAGTTGTATTTGCAAGTGTATTGATACATATTTGTGT
TATAGATATTCTTGACGATTTCTCACTGTTGTCTCTGGTTTTCTTCTCTT
CCCAAATGTGTAGGGAACAACAAGAACAGACCAAACTGGGGCCGGACCAA
GTCGGCCAGCCTGGAGAGGACCAAGTGGACAGAAACCCTGGGACGGAGCT
ACAACACGAGGACAGTAAACAGAACATATTCACGTCCATGCAGAACCCAG
GACAAAATTCCGTAACACCCACCGACATGAACACTCCTATGGGCCCACTA
GCGCCGTCCGGGCCGGGGCCGGCGGGGCCCAGCGCCGTGGCCGTAAGTAA
CTCGGACGTTCTAAACCCCCAGTCTATGCAGGGTGCCATGATGGCAACTA
TGGCCTCAGACCTGGTCAGCTTAGGGCCCTAACCCTTACCTCAGCCACAG
GACCACCGTGGCACGAGCCCAAAGACACACTTCTCATATAGCCGTGAGAA
AGAATACTTACATATCCGCGCTTGACAATCAAATACAAGAAAGTTATACA
ACGGCACACGAGTTGCCAGGTCTAGAAAATACAACCCACCCAAAACAGCA
GACGGTTTGAAAACTCCAAGAAGATGCAGTAAGAATATCGTGGATGTACA
AATAACGTTTTTAGTTTTGTACGAGTGCCATCTTGTGCTGTGTTTTTATT
TTTTTTGGTTGTTGTTGTTGTTGTTATCTTTACCGTCTGTATGTGCGCAC
TTGCCAAAAGTATTGTTGTAAATAATCCTAGGGTATAGGAAATAGGTTGT
TGTACTGTTGTTGCGACCAAGATAGGTAAAGCCGTAGGGCTTCGCTGCCG
TGATGTTTTAGTGCTGACTAGACCCATGTCGTCTACAAACAGAGTTCGTT
ATCCCCCTCAGAGCTTAGCTTATACCTCAGTTACCAGGAGTTACGCAGGG
TTGAGAAAGTCCCTTATCCTACCTGTGTTATCCACAGACTCCTAGAAATG
TTATCATGTAATATACTTCTTACCGCCAAATCTTTCTGGACTGTTACAGC
TTACGCCCTAGCCTCAGATATATAGTTAGCTACAAGCTATAACTGGTCGA
TGAATTTGTGCGCATCATATGTTTTTTTAAGAGTTCATATCTCATGAATA
TTGTTCAAAATTTGCTTGTTTCGACTGAAACTTCTCCCCCATTAGTATGA
ATAAAATTCATACGACGATGTATATCTATTTTTCTTTTTGTGAGAGGACT
ATTTATTCAATCAGTGAGTCATGAATAGATATGTAGTGAGTGCTAGTGGA
GCAGCAAAAACAAACTGCGCGCTGTGTGCCGTTAAAAATGTATTTTTATT
CACCAAGTTTCATTGTAGTATTTTTTGTGACAGAGACAGGTAACTTTGAA
TTCAAAATAGG Coding sequence (CDS) from alignment at Sc0000273:184371..189931- >Blg00587.0 ID=Blg00587.0|Name=Blg00587.0|organism=Branchiostoma lanceolatum|type=CDS|length=873bp|location=Sequence derived from alignment at Sc0000273:184371..189931- (Branchiostoma lanceolatum)
ATGCTACCTTCGTTCGGGTTCACCCAGGAGCAGGTCGCCTGCGTGTGCGA
GGTCCTGCAGCAGAGCGGGCAAATCGAGCGCCTCGGCCGCTTCCTCTGGT
CGCTGCCCGCCTGCGAACACTTACATAAAAACGAGAGCGTGCTCAAGGCA
AAGGCAGTGGTGGCCTTCCACCGAGGAAACTTCCGGGAGTTGTACAAGAT
CTTGGAGAGTAACCAGTTCGGGCCCGAGAATCACCCCAAGTTACAGCAGC
TATGGTTGAAGGCACATTATATGGAGGCCGAGAAGTTACGAGGCCGGCCG
CTCGGCGCCGTGGGGAAGTACCGGGTCCGCCGAAAGTTTCCGCTGCCCCG
TACCATCTGGGACGGCGAGGAGACCAGCTACTGCTTCAAGGAGAAGTCCC
GGGGCGTCCTACGGGAGTGGTACGCGCACAACCCGTACCCTTCCCCCAGA
GAAAAGAGAGAGCTAGCCGAGGCCACGGGCCTGACGACGACCCAAGTCAG
TAACTGGTTCAAAAACAGGCGGCAGCGGGACAGGGCAGCTGAGGCGAAAG
AGAGGGAACAACAAGAACAGACCAAACTGGGGCCGGACCAAGTCGGCCAG
CCTGGAGAGGACCAAGTGGACAGAAACCCTGGGACGGAGCTACAACACGA
GGACAGTAAACAGAACATATTCACGTCCATGCAGAACCCAGGACAAAATT
CCGTAACACCCACCGACATGAACACTCCTATGGGCCCACTAGCGCCGTCC
GGGCCGGGGCCGGCGGGGCCCAGCGCCGTGGCCGTAAGTAACTCGGACGT
TCTAAACCCCCAGTCTATGCAGGGTGCCATGATGGCAACTATGGCCTCAG
ACCTGGTCAGCTTAGGGCCCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00587.0-exon-Sc0000273-1570713199:186648..189931 | Blg00587.0-exon-Sc0000273-1570713199:186648..189931 | Branchiostoma lanceolatum | exon |
| Blg00587.0-exon-Sc0000273-1570713199:184371..185668 | Blg00587.0-exon-Sc0000273-1570713199:184371..185668 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000273 | genome | Sc0000273:184371..189931 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00587 |
|
