|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000273:241387..250008- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00580.1 ID=Blg00580.1|Name=Blg00580.1|organism=Branchiostoma lanceolatum|type=mRNA|length=8622bp|location=Sequence derived from alignment at Sc0000273:241387..250008- (Branchiostoma lanceolatum)
CTGGGCGAATGAACGCCAAGCCTCCTAACTTGGCAAGGCCCGGGTCCGTC
CGTGCCGCCCGCCCGCGAGAGGCCCAGCGAAGGGGTAGGCATTCTTCATA
TACCAGAAGGGCTGAGAACTTCTCATGTTACAAACACGTCTAATGGGTAT
TGTTTTAGAAGGCTGGAGATACAGAAGTAGGTAACTCTACACCGCTTGCT
GAGTAGTGTTAGACATGCTCTTATTGTCGCTGTGAGTGACAGGGTGTCCG
GACACGACAATGCCCGTCCTGTTCTCTATTGATGACAAAAGACGCGTGGG
CCAATCAGCGGCGCGGCCCGACCATTCCCAGCCTTTGTAAATACAAAACA
CACATCCCGTTTCATTAGTCCGCGTCCAGTTCAAGCCGAGTCGGTGCGTA
CGGTGTATGTGTGTGTTGTGCTTGCTCGGTGTCTGTTCAACTTGAGGGGA
TGGCAAACGCGGTGGAGAACGTTAATCCGAACGTGAACCAGGGAGTGGAT
ATGGGCACGGGGACTCCTGGAGTCCAGACGAGCCAGACTATCAACGGGGG
CGACACCGCCTCGACCCTGACGTTTTCTCCCGAGCAAGTCGCCTGCGTCT
GCGAGGCTCTGCAGCAAGGCGGGGACATCGAGAGATTAGCACGATTTCTC
TGGTCCCTGCCGCCCAACGAGTTGCTGAGAGGCAGCGAGAGCGTGCTGAA
GGCCCGGGCCATCGTGGCTTTCCACCGGGGGAGTTTTAAAGAACTCTACG
CCATTCTGGAGAGCCACAACTTCGACACGTCCAACCACCAAATGCTGCAA
GACATGTGGTACAAGGCGCACTACATCGAAGCACAGAAAATCCGCGGCCG
TCCCCTTGGAGCGGTGGACAAGTACAGACTGAGGAGAAAATTCCCGCTCC
CTCGAACCATCTGGGACGGCGAGGAGACCGTCTACTGCTTCAAGGAGAAG
GCAAGACAGGCCCTGAAGGAGATGTACAACAACAACCGGTACCCGACTCC
AGACGAGAAGCGAAACTTAGCCAAGAAGACTGGCCTCACACTTACACAGG
TCAGCAACTGGTTCAAGAACAGACGACAGAGAGACAGGACCCCATCCATA
CACAAGGGGTAAGTCTTATTGGTTAGGAACGGAGTTTGGCCACATGTTGT
TATCACAGGCGTTGATTGAGCACAGCCACGCCGACATGACAGACCCAAAC
CAAAACAAACCACGCCAGTTTATTGCTCAATCTCCTTCCTCAATTAACTC
GAACTGATTTGCTTTACAATGGGCCCATATCCTGTACTACGGTGTTTTTG
TTGTCTACCCTTCGGTAGTCCCGTCCCCCTCTATTCAGGCTTACCTAAAT
ATTTGGAAGTGGTGCCATACAACAAGTCAAGATACTGTGAATGGTCGGGC
CGGGGGATTTGAGCCACATACCGACGTCTCGCGTCAGTGGCAAGACCTAC
CCCCGTGTCTACCCAGCGGCTCCGGTGTGAGTTATAATTATCCTCAAGAG
CCACTCCAAGCACAACACAAGAGTGTGTGTGTACACGTCAGTTCAACATG
TTTTCTCCCTGACTGAATTCGTATGTACCTACAGTCTACACCCACCAAAT
CATTGACTCCCCAACACTACATTATCTTTTGTCATAGACGACCCAAAGTT
TACATTTCTGCGAACCCCCCATCGTTGACCTGGATACACATCCAAGACAA
CTAGTTCCTAGAAAAAGTCGACCCAAGATTCCCACACACAAACATTACGG
TGTGAACTCCCGCTAGGATAAATCCCTCCCGGTGTATATTCTGCTGTTTA
TACACCTGCGAGTACGCTTAGCCACCAAGGTCTGTAGGCAAACGCACCAG
GGGCTCATTAGATTGGAATTAGTCCAGCTATGCTCTAAGGAAAGATGTTC
TAGGGGTCCAAGTGATCACGACATGTTGTTTCTGTTTTTAATACACAACT
CTGTGTAGAATGGAAGGCAAGACTAAGAGAAATGTGGCGCTGGCAAGTGT
TGACAGGACGTGTCTGTGGGAAGGGTTTCATCAAGATGGGGTCGGACCTG
AAATAGTCAAGCCACGCTAAAGTTGTCTGTCAAAATTAGCCCCCAAGTTG
TCGGTGAAGCATTGGTTTATGGCAGTTATATTTCATAAGGACTGGCCTGT
ACGTTTATATCGACCCCTCCAGTTCACGTGCCGGGCATTTTTGTGTTTGT
ATACTTTTTTCCAGACGACAAGAAACGTCGGTGTGTGTCAAAATGGCGGC
CACTGGTTACAGATCGGCCTAACCCAAACCTGTCACTGCCTGTCTCTCCC
GTGTATCCTTGTGGCCCGAAGGGTCACTCACTCCCGAACCTGCCAAATTT
TGTGTTTGCTCGATTTATTTTGTACGTTTTTGTCGCCTCCCCTGCTGGCT
TAATTATATTTTGACACCTCGATCAAATCAAAGTGTTAAAAGTAAACGCC
TCCCGGGGCGGTGCATTCCAACCCCACGGTTCCTGAACAGACGGTTTTCA
TGTCCCCGGTCCGTTGATGATATTTACGTTTCGTAGTTTATGTTCGAGTA
CACTCTTGACCCTAAAGATTGTAGACATTGGAACTATTTCAGGGGCTCAT
CCATGAACGTTTAGTTCTACAGTGTAGCTAACGTGGAGGCTGGAAAACTC
AAATCTTTCAGTACACAGACGTTATTCTAAATCTTTGTTCCAATAGTCTT
GTGCACGCCGGTTAATATTCCTTCACGTTGTCCCTAAGCGAGTACTTGAC
ATAATAACAACACGTTTTATAGGCCTGTGTAATGATTTATGATTCATTGA
GAAGTTGAAGTATACAATAGTCCACTTTGCTGTCCAATGGATTTTGCACG
CATGTGTTGCTCATGTGAGGCGATGACGATTAATTTATTGATGGCTAGCT
CTCTGTGTATACTAAAGTGTACTCGTAAGCTTCATTTTGTCTATCCCGTG
TAGACGTGTTGTATCGAGAACGCCAAGTAAAGATAGACAAAACAAGATCA
TTCTTACTGATTCTATTCTCTCTGATTACGCAAGACTAAGAAACTATTAC
TAGTATTTCTACTCACGGTTTTCAATGTCGCAGAAAACTCTGTTTTCATT
ACTTGTTTGTTAAATCTGTCCAGGAAAAGTCAACTCGTGATATTTGTTCA
GAGGGCTACCGGAGACGTAGATTCCAAAGTTTCTACAAGACCACACTGCA
CGAACTCTGCCTCTTACAATAACAATTGACATTGGCAGTGAAGTAGGAAC
GGGAGGGGAGGGTGGTGATAGTAGAAGAAACAGTAACTAGTAACGTATGA
TTATGTCTGATTCTTTTGTCTGTAAGCATTTCCTTCCATTGTCTCAAAGG
ACGCATTTTAGCCGTATGGTTTCCCGTACATATGTTGTTCAGGTTTGTTC
ACAGATGGACGAGGAAATGTGATAATTATAGTGGCCCTGATTGTATTTTT
ATTACTATCTAGTATTTATATGCGAACTGTAATATAAATATCAGCAGCAT
ACAAATCCAAACATGTTGTTGCTCAAATATACTTTGTTGTTTTTGGAGAC
ATTGTGAAAATCTATTTTTCTTGTTGCTTGATAAAACTGGGCACGTTCTT
ATAGCTAAGATTTGAAGTTTCTTTAAAATGAACTGCGTAAGTATAAAATG
GGAAAANATAGCTAAGATTTTAAGTTTCTTTAGAATTAACTGTGTAAGTG
TGAAATGGGAAAAAGAAAGATTGTAACTAAAGATTTGCTTGAACGACAGC
AAGCTATCATGTCTTTTATAGCGACGAAATCAGACAAGTATTTTGCAGTA
TGTGTTTATCACATGTTGCTTTTCCGATTTCGCATTCCTATTCCGTGGTC
GGTTAGCAACAAAACGGAACCCAAAGCAGACCCGTGTTTAGGGAAAACAA
GTACACATCTTCACACAAACAACACCTGCAGGACACTTATTAGGTGGAAC
TTCCCAAGACACGTTATTTACAGACACAGATCAACATGTCGGTGACCAAA
AACACTGGGCTTTAGACATTTGCCCGAAAAAAATTATTTGCAAACGCTAG
GTTAAAGTAGCCTCCGTTGCCGGCTGATAGTTACGGGCTGGCTGCAAAAA
GTGTATTATTTAGCCCCCCAAAAAGCCGGTTCAGAGCCTGCAACGGAGGC
TAAGGTTGAAGATTGCTTTGTCTAGGTTGATAGTTTTCCGAGCTCTTATG
ATCAAAACGGCTTGGAAACTAGAGAGCCAGTTCTTCTTTTTTGTCAGAAT
CACTGGACAGGTGTACTTGAGGTCAAATAATCTATTTCACCAAGAGGGTC
CGCAGGATTTCACGCACATAAGGTGTTCTGCTGTGGCAGCGTATAGATGG
ATTTTCTTACTTGTTTACGGTTTATTTTCTCTGTTTTGTTTTGTTTTCTG
TGTTGAATACTTGAGAGTTTGGTAGTCTTGGTGGGCCAAATATTGAAGAA
AAACTTGTAGTTGTATCACTCATTTGGTGTCTGTAACATAACACGTTGGA
TCCATGCCCAATTATTGTAGATACTGAATATCGGTATATCATATGAAGAA
GGGTACTTCCACACAAAGAATTGGTATATGAAATTCATTAATAAGAGGAG
GGACGATGGGGGTATTGCAAGTTCATTGCCAAAACGTTCTGGCGACACAT
AGCCTGCAGAAAACAGGCAAATTATGATCTCTTTTAAGAAAGTGTCAGAT
CTTGAACTATTCTATAATGAATTTTGCCATTTGCATGCTTGGACAACCGC
TAGACATTTGTGCACTCATTTTGAAACATAGCAGCTAATTTTGCAGTTTT
TAGATATTTTTTACGGATATGTGCTTTGTAATACTAGGAGATTGTGCGAA
ACAAATATGCAAACAAATCGTTAATATAAAATGTAAACGTTGTGTTGTTG
GTTTTTTAACAGAGACGACAGACACAGTGGATTGGACAGCGGAGACGAAG
ATCTGAAGGGTCATCTCAACGGCGATCTCTCACACGACCTCTCCCAGCTG
ACCGCACGGGTGGACAAGATGGACAGCAGCATAGCGACCACGCCGGTGCA
TGCGCAGCAACAACAGGCGCAACTCCAACATCACCACAGCGCGCATGCGC
ACCATATGATAGGCCTGGACTACCCCGGTGACGTCGAGACCAAGTCGTGC
GTTCCGACGCCTCACGAACTGCTCGGGTCGTGCTCGGCCGTGGAAACATC
CGTACTCTGTACGCCAGTCAGTACCATCGTCAAAGGCGAGCCTCCTCAGT
AAAAGAAAGAAACAAAAGATCAAATCTTTCCATGTACCATTCCTAAAACT
TCTCACTCTCCAAAAACGTATATGTATACTTCATACACTCCATATTTTCT
TTTCATAACTTTTGATTGCCATGTCACTATTCATTCCGATTTATTTTGAT
TCTTTCTTTCTTTCTTTCTTGGCAGCATTCCTCCCCGTCTGTTTCTTTTC
CTTCTTTCGTCCCCGAACATTGTACATACCATTTTAGTTAGGACGAGTTT
CATCTCTTATGAAGTGGTGCCAAATACTTCTTCATATGAGAGATGTAAAA
TGTTGTGCGTGTGCACGTGTTGTTTTGAGACCAGCAATACGCATGTGTTT
TAGGATCCAAAATAGATGCTCTCAACTCAGAACTCCCTTACATATATAAC
AGTTTTGCTTTGTATATTCTATATGTAATAGGAAGACGTGATGTTATATG
TGCAGCCTTAAATGTATTTTTGTTGGATTATATTACGGAACCACGATGTC
CCCCTAGATATACTTTCTGTGAAGGTTGTTCCCAACACCAGGGGGAGATT
TTTTTGTAACAAAGGGTTTCGTTTCACAGTTTTTGTGGAGTTAGAACACA
CACAAAGTTTTGACACCCGTATTCGAACTTTTCCCGTTATTTTGCCGTTC
CTTGCCGTGTTTGACATGTAATTATCTGCAGTTTTCCGACAACATCAAAC
TTTGGCCTCTTGTGGTAAAATAGGCCATCAGCCAAAGGCAAACATCGTCG
CCTTATATGGAAGTAACCTAGAGCTGTGATGTCGAAAGTAGTCGAAAATT
CGTCGCTGCACATACATCTTTGTGACAACCCCGTACGAATCTGTGTTCAA
ATTATGCTCCCTGTTTTCCCTAGTATTTCCTTGTTCAGATTGCCAAACTG
TTATTATTGATGTACTATTTGTATACCAAAGAATCATGAAGTAAAACTTC
ATTCTACAGAAGCTAGTAATTTTGGTGTGTCTCAAATATTAACGCACTAG
TACGGGGAAGTGGGGAGGGGGGCATTCAAATGCCAACCGTTGTACATCCA
TTCCCCCATATGTTCAAGTGCTATCGCCTAAAGCGGAACTAAACGCAGAT
GATAAATGTCGAACGCCCCATAACGGGAACTAGACAAGCCTCCTGCTGGT
CGTTTAGTTGCAATAAACTATCCTATTGTTGTACAACAAGCCCGTTTGGT
GTTGATGGTCCCTCAGAGAATTCAAAATAGATTTTAGAAAACCCCTGAGT
CCTGCGATGCCTGGCCGTCGCGATTTCATGCCGTAGAAAGCACTTGCAGC
TTTCGCCACTTTCGGTCCCTTTTTGTTCTCATTCATGACCCGGAGATTTT
TGGATTCATTCCTCCCATATTTTACACATTTGGGGCCCAAACTCCCGCAT
GCATAACCACCCACAATAGAAGAAGAGGTTTCAATTTTTTGCCTATACAG
TATGATGTTGCTCGTACATATGTAGTATTGCCTCGGCAAGCTACAACGAC
GTCAGCAAGCGGTAACAACGGAGGATGGTAGCCAGGTTAGAAAGCTATAA
AGGACTTGTAAAATTTCTCTCGAAAACTGCGGCTATATGGAAAAAGCATT
CCGTTATATTTTAGCCGGTGGCTATGCCTGTTATGTGCATATGAGCTTTA
CTTAGCCAGCGATTAGCAAGGTGCAAAAATATAATGAAGTGACATCCAAG
AGCGTTTGTTGTAAAAGAGGCTTCACGGAACATCTCGTTGTGAACAGGGG
GTCTGTAGGCGATTCTTGCCCATGCTGAGACCTCGCAGAGCTTCTGCGAA
AAGTACACATCGGAGATTAAGAACTGCGAAGCTCTCGTCATGGGGGTAAA
CGTCAATGTGGTCTTGTACCACCCCGGGAGTATAGACTACCACTGTTGTA
GGTTGTTTTTGGTACGGCTTATAGGCTGAAGGGGGTTCAACATGCATATC
GGATGAGGTAATGCTTCTGCTATTCAGTGTGATGACTCTCGCTTCCCCTC
TCCCGACCCCCTTAGGGATCGCTAACCTTAACCTTGGGCTCCTGACTCCT
CAGACCTGACGACTTTTATAGGCAGGCCCTTTTCATGACACCGTCACCTC
CAAGTTTTCCTTCCAACAATGCAACGCAAACAGGCTAACTAAAGTTCCCT
GTGAGTTGTTAAGGAGGATGGCTGCAAATCGATAGAGGCTGCTGGGTTGA
CGGAGAGACTTTAGATAAGGAAAGTCTCCCACACAATGGGTCTATGTAAC
CTAACACTTTCATCCACCGTTGCCTCTACACGCGCGAGGGGCGAAAAATC
TGCCATCTGAGAAGCTAATTGATCCGGGGTGCTGACACCCATTTCACGGG
ATTTATGATAGATCGGATTATGATATACGCTCTGGCTCCCGTCTTTAGAA
ACCCTACTCGCTGCCGAGACACCGGGGGAAATAAACCCAGCGGAAAACAC
GTTCACCATTATTGATTTGTCAAGACTAAGTCATTGAGATGTAAATGTAT
ATTGTACTTCCCTCTGTGTACAATGACATAACAATACGGCCATTAGTGGC
GAATGGCAATGGCAAAGCAGACGGGACTGGGGTTGTTGTATGTATACATG
AGTGTATTAGTAAATGGAGACGGGGAGAATATAACGGGGCAACTTGTGTC
ATTGCACCTGAGATTAGAAGGATATCCGAGACGAGTCCCGTCTTTTTGTT
GTACTAGCTTCCCGCCAGCCATAGCAAAGGCCCAGGGCTGTCTTCGAGTT
GAAACACGACTCCAGAATACCTCTTTCAGAAATAACATTTCAAAGGCCTG
AACTTAAGTTTTTTTTTTCTTTCATGATTTGGAAGAAAGTGTGCACCATC
TGTCACAATGATAGGCATAGAAAATACCGTGACAATGCGCGTGTGGTGAT
TATGACAAATTTACCAATTATGCTGTGAAGCAAAATGGACGCATACACCG
GAACGCATCAGTCTTATTGTGGAGTGAGGGCATGATGGATTTTTGGATTT
AAACTTCAAACTTTCCAATGATTTTTCAACCAACGAGAATTCTTGTCTCG
CAATGCTACTCCTACGAATATACTGAAAGCGTTGTAAGATATCTTTCATC
GCGGAGGTTAGAAAAGATTTCCTTGATAGTTAACCTTGAGTCCGAGCGTT
GAAGGAGATAATGGCGGACACCAGGCTATGACAGACAGACATGTGTTGTT
GAAAATGTCATGCTGCCGACTGACCCCGCCGTATCATTGAATACTAGTAC
TTGCTTGATTACTGTGGATGGACGGTCATTGTTAGTTATTAAAAAAGTAC
CTTCCGGGCTACACACATGCTTTGCGAGAGGTTTGTATCTAAATATTGTA
CCAAAAATAGCAAGGAAAAAAG Coding sequence (CDS) from alignment at Sc0000273:241387..250008- >Blg00580.1 ID=Blg00580.1|Name=Blg00580.1|organism=Branchiostoma lanceolatum|type=CDS|length=999bp|location=Sequence derived from alignment at Sc0000273:241387..250008- (Branchiostoma lanceolatum)
ATGGCAAACGCGGTGGAGAACGTTAATCCGAACGTGAACCAGGGAGTGGA
TATGGGCACGGGGACTCCTGGAGTCCAGACGAGCCAGACTATCAACGGGG
GCGACACCGCCTCGACCCTGACGTTTTCTCCCGAGCAAGTCGCCTGCGTC
TGCGAGGCTCTGCAGCAAGGCGGGGACATCGAGAGATTAGCACGATTTCT
CTGGTCCCTGCCGCCCAACGAGTTGCTGAGAGGCAGCGAGAGCGTGCTGA
AGGCCCGGGCCATCGTGGCTTTCCACCGGGGGAGTTTTAAAGAACTCTAC
GCCATTCTGGAGAGCCACAACTTCGACACGTCCAACCACCAAATGCTGCA
AGACATGTGGTACAAGGCGCACTACATCGAAGCACAGAAAATCCGCGGCC
GTCCCCTTGGAGCGGTGGACAAGTACAGACTGAGGAGAAAATTCCCGCTC
CCTCGAACCATCTGGGACGGCGAGGAGACCGTCTACTGCTTCAAGGAGAA
GGCAAGACAGGCCCTGAAGGAGATGTACAACAACAACCGGTACCCGACTC
CAGACGAGAAGCGAAACTTAGCCAAGAAGACTGGCCTCACACTTACACAG
GTCAGCAACTGGTTCAAGAACAGACGACAGAGAGACAGGACCCCATCCAT
ACACAAGGGAGACGACAGACACAGTGGATTGGACAGCGGAGACGAAGATC
TGAAGGGTCATCTCAACGGCGATCTCTCACACGACCTCTCCCAGCTGACC
GCACGGGTGGACAAGATGGACAGCAGCATAGCGACCACGCCGGTGCATGC
GCAGCAACAACAGGCGCAACTCCAACATCACCACAGCGCGCATGCGCACC
ATATGATAGGCCTGGACTACCCCGGTGACGTCGAGACCAAGTCGTGCGTT
CCGACGCCTCACGAACTGCTCGGGTCGTGCTCGGCCGTGGAAACATCCGT
ACTCTGTACGCCAGTCAGTACCATCGTCAAAGGCGAGCCTCCTCAGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00580.1-exon-Sc0000273-1570713199:248901..250008 | Blg00580.1-exon-Sc0000273-1570713199:248901..250008 | Branchiostoma lanceolatum | exon |
| Blg00580.1-exon-Sc0000273-1570713199:241387..245096 | Blg00580.1-exon-Sc0000273-1570713199:241387..245096 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000273 | genome | Sc0000273:241387..250008 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00580 |
|
