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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000273:142462..150050- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00576.9 ID=Blg00576.9|Name=Blg00576.9|organism=Branchiostoma lanceolatum|type=mRNA|length=7589bp|location=Sequence derived from alignment at Sc0000273:142462..150050- (Branchiostoma lanceolatum)
CGGCAGTCCCTCCCTGCATGTAGCTACTGCTGAATACAAACAGTACATTC
TGTCGTTTAGATATGAAGCTACTAGTAATATTCTATACGACCTAACTCCA
AAGATTTCGTCAAATCAGGCATTTTTCGAGAAGAGCAGGAACGCATGTGC
CGACATGTCAAAGTTCACGCTTACCTCGAAAGTTGTCTAACAAGTTTTGG
TTTTTCAGGGGGCGTCAACTTTTGAACTGAACCAAGTCAATGCAGTTTGT
GGAATGAGACCAAATGTCGCCTGCTACCGATATTACGTCACTATGATGAC
CGGCTACGCGTTGATAACCGTGGCCTTGGTCACAGTGATGTTTCTCCATT
TGCATGACGAGATAGGTGTGAAAGCAAAGACGAAGAGAGAGAAGGGAACC
AAAGGTTCCATCCCCGACAAGCCTAACATCGTCCTCCTGGTGGCTGACGA
CATGGGGTGGGGGGATCTGTGTAGTTACGGTCATCCTACCCAGGAGTGCG
GCGAGATAGACAAGATGGCGGCGGAGGGGATGCGCTTCACGCAGTGGTAC
AGCGCAGACTCACTGTGCTCGCCTAGCAGGGCAGCGCTGTTGACAGGTCA
GCCCAAATGTTGTTTTAGGTATCACCATGGCCCTTAGTAACTCTTAGTAT
CTTGCAGGTTTGTATCACTACATTATTGTCTACGTAGCTGACGTCGACTC
TGGATCTTCCCCTATCTCTTTTTCCTTAGCGTAACGTCAACTCTCATAAG
GCCACAGCAAGTAAATTTTATGGATGACATCCTCTGCAGACTCCAAATCT
AGTGCGCGCGGGCGAAAAAAGGTTGGCAACAACAACAAAAATACACCTAA
CGTTATATTTTCAAGCTTGAATACCATAAAGCATTAATCATGGTACATTG
TATCATGAAACATGGTATCACAACCAACAAGTTTTTTTTTTCTATTCCTA
TATTCAATAAACAGGAAGTAACACAGGTGTCAACATTAAAATCATTATAG
ATCCGGGTTTGTAACACAGTAACACATCAACAATAGAGAACGGACGCATA
GACAACGCTTCTGGGCACGGGGGTCTCCTAAGGCAGACTCACTGTGACTA
CATAATGCTGGCTCTGCTCATTTCAACTGAAGTACTCTCCGCTAATTCTG
TCCTGACTGTCTGACTGAACTATTGTGCCTCAGAAACACCCCGTCTTTTT
ATACTGCCTCCATCAGACAGACAGCTATACAATAGTCAACTCAAACCCCG
AGACATGAACAAAATACGTCTGGACATTGTTATGCAAATCGAGAAATAGC
TGAGACAAGAGCTCTCAAGTAATGTGCCTTCACAGTTCACATATGCATTT
CCACGTTTATTGAAAGAAACGACAAGAAAAGTACATTTTGAATATACCTT
AATTCTGATATTCGTAGAGCAATCACAAAGATTAGAATCTGAATGAATTG
AAAAAAATCGAAGGTATCAGAAAAATCTCCGTGACCAGAGGTTTTGTCAA
TTCTGTCCAAATGAGATTAAAGATGACCGCCAGCTTATTATGAATGAATG
AATGATTTATTGCACAACAATTACATCAGTGACAATGTATGGCAAATTAC
AGACAACATAGGTAACAATCTAGTTCTATATAAGAATATTTCTACTTACT
ATAAGACTATATCCAGTGTGATCTATGGACATTGCAACATGGAACTAATA
CAGACTAAGAGTTGTGTTTTTCTAGGCTAATTGGAATCTAAGGAAATTTG
TAATTACTATAACGCTACATCAAATTCAATCTACGGTACATACAACATGG
AGATATATCTAATACAGACAATGTGTTGCGTGTTTCTAGTCTAATTTGCG
ACATTACATTTGTCAGTTCTCATTAAGGAATGGTACAGTTTCGTTTTTCC
ATAGTGTGGTAGATATATTGGCCAAGGTGGATAGATATAGAATCTGGACA
TGACATAAGTACATTAAATGTATCGCTATCTGTGTAAGGTAGGGTTATAT
TTGACTTACATGTAATGGATTGCATAAGCACTTGTCTTTCAGCATTATAT
GTAGGACATGTTATAAGAAAGTGGTACTCGTCTTCAATACTATCTTGGCA
TGAAGGACAACGTCTCTGGTCTGCCGATATATTGCGATGGCGACCTTTTT
CAATTTCCAGGCAATGTGCACTTATTCTCAGTTTGGTTATGTTGGTCACA
AAAATTTTGTTTTGGATAGACAATAGGTAGTTTTCCATACTAAATTGAGT
TTTGATTTTAGAGTACACTTTAAGTTTATTATTATTGTTTATTTTTTGTC
TCCAATCAGAAAGGAATGTGTCCTTCATGCGTTCCTTGAATAAGTATCCG
AAATATTTGGCATCAACATTAGGATTGAGCCAGATATTTCGGAAACCGTG
TCTAGATAGCATATCTTGGACATGAACAGCCCAATCTTGATCTTCTTCAA
CGGCTACATCATATGCTTTTCTCACGATTCTGTCATTAGGCAAGTTGTTA
AGTCTGAGCCAATATTTGATTAGGTGGGTTTGGGTGTCGATGTATAAAGG
GAACGCACCTAGTTCTCCTCTTACGGCGGCGTTAGTTGAACTTCTGGGAA
CACGGAGTAAAATTTTGTAGTAGGTTAGTAGAACTTGTTCTAATTCAGGG
ACTTCATATGATATTTTTGGCTGTTCTACTGATTTGTTTTGATTTCTTAA
TATGTGCGATTTTTTTATTATGTTAAGCTTATCATTGTATCTTTTCAGAC
GGACGAGTAAAGGGCGGGTAGAGCAAGGGTCACTTTTCTTTCCGATACGA
ATTGTCTTGAGAATACTTACCTGTGATCCTAGTATTGGAGATAGGATGTT
AGATACTATATTTCGAATATTTTCATTTGGTGATTCTTTTATTCCTTCAA
GGATAGGGTCCCTACATTGGATATTTGAGCCTAATTGTTCACGATATGAT
GATAAACGCACAGAACTGTTCATCTTTCTTGCTGCTTGTGCAAAAGAACT
TAATACGTTTCATCCTTTACATAAATTCAACTACGTTTTGAGATGAGATA
ACCCTCACCGTGTACAAATAGATAAATATATCAAAGAATGTTTAAACCTT
AGAATCAGTAGTGTAAACTCAACATGTTGATATATTTTTATGTATTCATA
TACTTGTTTTTAAGTTGATTCCTTTGCACCCATTAGTTTGTCTGTATGTA
CAGATGTAGTGACCTTACGAAACTTGCTGTACTTTTGTTGTGTCAATACA
TTTTTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATT
GTATTGTATAATGAAAGTGCCTTGCCGCTCCAGGCCGGCTTCCAGTCCGT
GTGGGTGTGTGGGGAGAGTCGAGAGTTTTTGAGACGACAAGTACGGGAGG
CCTGCCGAAGAACGAGACTACCATCGCTGAGGCACTGAAGGATGCTGGGT
ACGCCACAGGCATGGTCGGCAAGTGGCATTTAGGTGCGTGCCTGGGTGTG
TTTGTTTGTTTATTAGTTTGTTTGTTTGTTTATTTGTTTCTTTCTTTCTT
TGTTTCTTTCTTTGATTGTTTGCATGAACGCGCGCGTGTGTGTGCATGCG
TGTCACTGTGAATGCGCCTACGTGTAAGGGCGTGTAAGCGCGCGCGGGTG
TAAGTGCGTGTGAGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTTTGTGCG
TATCTGTGTGTCTGTGTGTCTGTGTGAGTGTTTGTGTGTATGTTTGTCTG
TGTGTGTGTATGTATGTGTGTGTGGCAGTGTGTGTTTGTGTTTGTGTGTG
TATGTGTATGTGTGTGTGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTTTGCGTAAGTGTGTGTGTACATTGAAGTCCACGTG
TATCACGTGTTCGCCTAAGTGTACATGTATGTATATAATGTATCTATCAG
TGCTTCTGTAGGTGTCTGTATTTGGTGTATGTCTGTATTCGGTAAGTGTC
AATATTTGGACTGCGTTTGTGTGTTTCAGTGTCTTGTTGTTTACCTACCA
CTCCTGGCACAATATATTCATATAAGGAAACCGTTAATTTTCACAGGTAT
CAATGAGTTTTTACCTGGTGACGGAAGACACCTGCCTCACCACCACGGGT
TCGACTTCGTCGGAACCAACCTTCCGTGGACCAACCACTGGGCGTGCGAC
GAATCCAAGGTTTTCGGAAGTTTCCAATCGTCTTGGAATCCTTAACCCTC
TCTCTATGGGTATATGGAAAGCGCACCAGTTCGAACCCGAATACTATATT
CTAGAGCGTTAGCATATGTACATTATTCTATAGATCATTTTTACTGTTAG
TCATAGATAGATTAGTTGTAGTTATTATATTTGTCAACAATTACCATTAG
TTCAACTCTGATGTGCGTAAGTTTCCATACATTGTACCAGTTACAACTGT
CGCGCAATAAAGTTCTTCTTCCATAGCTCGTATGGGTAAACATACCTGAG
AAGGTCCTAAAAGTCACAATTGAACACATCACGCACGACGCAACCACTGG
TACTTTTCATTGGCTTTCTCTTGCACAGTTTTGTGTTCCCTTCCAAGAAG
GATGCATGTATGTACGAGTTCCTTAGCTTTCTTTACTTATTTTACCTGAC
AATCGAAGTTGTCACTTTTACCACTGTCTGAATGGCTGATGTTCTACCTT
GTACATGACTCCATATTTGATTGAACCATTTTTGTATATATTGATTTTCA
TAGATCCACATGGAAAGCCCTGACCCGATGTTGTGTTTTAAGTACTGGAA
CACCACACTAGTCCAACAGCCCTTCAGACACGATAACCTGACGGCCTCCT
TCCTGCAAGACTCCATAGCCTTCATACACAACAACAAGGACAGACCCTTC
TTCTTGTACTTCTCCTTTGCTCACATGCACACCGACATGTTCTCTGCACC
GAGGTTCAGGGAGACGTCGAGAAGAGGTAACGTTAACTATTTTGTCCACT
CTCTTTGTTTCTTTGCTTATCCGTTTGTTTCTTTGTTTGTTTGTTTCATC
GGTGTTTGTTTCTTTGTTTGTTTCATTCTTTCTTTGTTTGAAAGGTAGTA
GAAAGATCTAGTAATACTTTCTTTTGATCAGCATTGTGACTTAGGGTCCC
TGGCTGTTGTTGTCGTCCATTTAAATGATACAACAAATATGGGTCTGTAC
CGTTAGGCCGATATGGAGATGGAGTACGTGAGTTGGACTGGGCTGTAGGA
GAGGTGCTGAAAACACTCGTCAGTCTACAGATCCAGCACAGAACACTGAT
GATCTTCCTGTCGGATCACGGAGGCCATCTGGAGATCTGCACAGAGGGCG
GATCAAATGGGATTCTCAAAGGTACACTTTCCTGTGAAGATAACATCAGT
CTGTACATCAGATATAGGATAGACGTGTCTTGGCTGAGAACCTTTGAAAA
TACTACATTTCATTTCGTAATCGCAATTTCCGTTGTGCATTTTGTAGGTG
GCAAGGCATCTACGTGGGACGGAGGGCTGCGTGTTCCTGGTATAGCCTGG
TGGCCAGGTGTTGTTGGACCTGGGCAGGTGTCGCAGCACCTGGTCAGCTC
CATGGACGTGTTCCAGACAGCTGCTGAGCTGGCAGGTGCAACACCACCAA
AGGATCGCATCTATGACGGGAAAAGCCTGGTTCCGATTTTGCTGCAGAAG
ACGTCGGCTGTTCCAAGAAGTAAACTTTCTCCTTCCCCGCGGACATTGTT
TCACTACTGCTCCAATAGACTAATGGCTGTTAGGCACGGGGGGTACAAAG
CACATTTCCACTCCATGGAGCTACCCGGACTGAACTACACGGAATTTTGC
CCGAGTGGTGTCCCAATAGCGGACTACTACACATCGTTTGACTGTTACGG
CCCTCAAACCACACACCATGATCCACCACTACTCTTCAATATAGACATGG
ACCCAGGAGAACGGTATCCTTTGCCCATAAATGAGTACAAAGATATTCTG
ATAGAGATTCTTTTGGAAAAGTTAAAACACGAGGTCAGAATGGTACCAGG
AAAGTCGCAGTTAGAAGAAGGTTCTGGGGCGGTACAGCCTTGCTGCAAGC
CGCCATTTTGTACATGTAATTACGAACCGTTTTGGGAAAAGGGATAAAAT
AAAACAGAACAATACGCAGGGCAATATGTCTTCTACAATTTTACTGCTTC
AGCTGAGGAAATTAGATAGGAAACAAAGGATCGGATACATCGATCAGGTG
GATTAAGCGCACAAGGAACTCTCGGATGTACAGTCCTCAAGACTGTGTAC
CTCAAGGTTGCATCCTCGACAACCTCCTATTTCCTTTAAACTTGCAAACT
TTGAGCAGTATTATAGAGCGGTACTCGTAGCACGTAACGCCACAATTGTC
CATACTGCAGTCATAATAGAGTAAGACTCTCGTACACTCACAAACTCAAC
GACACTAAGTGTTCGCACAATAGTGACTTGTAGTGTTTGGTATTCTGTGT
GGTGATTAGGTACCACTAATGCAATAATTCATACAAGTGATATTGGCAGT
TGAGAGAATAACAATTTTAAACAACTTTTGGCGCTCATGGTTCTCAATCA
TACAACAAACGTTCGTACAGTACAATTCACTACAAACGTGCAGTGAACGA
TGCAGGTGAAAAATTGTTACAGGATAGATCGTTCTTACATTTTGATTTAA
AAAGAATACTTGAATATAATAGGGAAAGGTTGTTATACAATGCGTCATTT
TTCAAAGCTATACACAAAGTTCTTTGATTTCCGCTCGGAGACATTGAAGT
TTGCTCGAATTGGCATTATCAGTACTACCGATAGGGGGCGTGCAAAACAG
ATCGCATATTTGTCATAAACGTACTTCAATGGAACAAGATCGAGTTTGTA
CATTGCCATTTCGGGCCGGCTAGGTCTAATTTAAACAGTCATCTGTTAAG
AGGCTAAACTTTACATAACAAATACTGAAATAATTGGTACTTACTCAAGT
TTTCTCGTTCACGAAATGTACTGACAAACACGGTATTAAGACTTGTTTCA
GACCGACACCGACCCGAAAAATTCTTGTACCTCCTAAAGACAAAAAGCCA
AAGGAAAGTAGATATGGTGTGGTGTATCACAACTCCTGCCAAAACCGAAC
GTGCGTTGAAAACGAGGTTTCTCGAAAAGCAACGACCGAGTTCTGCCTGC
AATACCAACATAGATTACTAGTCGACGCTTCAGTACCGCAGAGTGGCAAA
GTACAATCATAATTTCCTGACATAAGTAATACTCGATAACAACACGTTCG
CTCCTGCAAATTATGTTACATACATACATACATACGTACGATTTTCCCAA
AGATGAATTACACTTACACGTATTTGTTCGTAATTGCTAGCAACCATTTA
TTTCTGGCGACCCCCTCTCTCTATTTTAATATGGTCTATACACCCAGGTC
ATTGCAAATGGCATCGTATGCAACGCAATGAATAATGGCAAATAAAAGAT
ATTTTGATTACATGATCGTCAATGTGAATCATCAAGCTTGATAATTCACT
ACCAAGGTAATTGATAGAACCGTTCATTATGGACTAGCT Coding sequence (CDS) from alignment at Sc0000273:142462..150050- >Blg00576.9 ID=Blg00576.9|Name=Blg00576.9|organism=Branchiostoma lanceolatum|type=CDS|length=1644bp|location=Sequence derived from alignment at Sc0000273:142462..150050- (Branchiostoma lanceolatum)
ATGAGACCAAATGTCGCCTGCTACCGATATTACGTCACTATGATGACCGG
CTACGCGTTGATAACCGTGGCCTTGGTCACAGTGATGTTTCTCCATTTGC
ATGACGAGATAGGTGTGAAAGCAAAGACGAAGAGAGAGAAGGGAACCAAA
GGTTCCATCCCCGACAAGCCTAACATCGTCCTCCTGGTGGCTGACGACAT
GGGGTGGGGGGATCTGTGTAGTTACGGTCATCCTACCCAGGAGTGCGGCG
AGATAGACAAGATGGCGGCGGAGGGGATGCGCTTCACGCAGTGGTACAGC
GCAGACTCACTGTGCTCGCCTAGCAGGGCAGCGCTGTTGACAGGCCGGCT
TCCAGTCCGTGTGGGTGTGTGGGGAGAGTCGAGAGTTTTTGAGACGACAA
GTACGGGAGGCCTGCCGAAGAACGAGACTACCATCGCTGAGGCACTGAAG
GATGCTGGGTACGCCACAGGCATGGTCGGCAAGTGGCATTTAGGTATCAA
TGAGTTTTTACCTGGTGACGGAAGACACCTGCCTCACCACCACGGGTTCG
ACTTCGTCGGAACCAACCTTCCGTGGACCAACCACTGGGCGTGCGACGAA
TCCAAGATCCACATGGAAAGCCCTGACCCGATGTTGTGTTTTAAGTACTG
GAACACCACACTAGTCCAACAGCCCTTCAGACACGATAACCTGACGGCCT
CCTTCCTGCAAGACTCCATAGCCTTCATACACAACAACAAGGACAGACCC
TTCTTCTTGTACTTCTCCTTTGCTCACATGCACACCGACATGTTCTCTGC
ACCGAGGTTCAGGGAGACGTCGAGAAGAGGCCGATATGGAGATGGAGTAC
GTGAGTTGGACTGGGCTGTAGGAGAGGTGCTGAAAACACTCGTCAGTCTA
CAGATCCAGCACAGAACACTGATGATCTTCCTGTCGGATCACGGAGGCCA
TCTGGAGATCTGCACAGAGGGCGGATCAAATGGGATTCTCAAAGGTGGCA
AGGCATCTACGTGGGACGGAGGGCTGCGTGTTCCTGGTATAGCCTGGTGG
CCAGGTGTTGTTGGACCTGGGCAGGTGTCGCAGCACCTGGTCAGCTCCAT
GGACGTGTTCCAGACAGCTGCTGAGCTGGCAGGTGCAACACCACCAAAGG
ATCGCATCTATGACGGGAAAAGCCTGGTTCCGATTTTGCTGCAGAAGACG
TCGGCTGTTCCAAGAAGTAAACTTTCTCCTTCCCCGCGGACATTGTTTCA
CTACTGCTCCAATAGACTAATGGCTGTTAGGCACGGGGGGTACAAAGCAC
ATTTCCACTCCATGGAGCTACCCGGACTGAACTACACGGAATTTTGCCCG
AGTGGTGTCCCAATAGCGGACTACTACACATCGTTTGACTGTTACGGCCC
TCAAACCACACACCATGATCCACCACTACTCTTCAATATAGACATGGACC
CAGGAGAACGGTATCCTTTGCCCATAAATGAGTACAAAGATATTCTGATA
GAGATTCTTTTGGAAAAGTTAAAACACGAGGTCAGAATGGTACCAGGAAA
GTCGCAGTTAGAAGAAGGTTCTGGGGCGGTACAGCCTTGCTGCAAGCCGC
CATTTTGTACATGTAATTACGAACCGTTTTGGGAAAAGGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00576.9-exon-Sc0000273-1570713199:149455..150050 | Blg00576.9-exon-Sc0000273-1570713199:149455..150050 | Branchiostoma lanceolatum | exon |
| Blg00576.9-exon-Sc0000273-1570713199:146568..146717 | Blg00576.9-exon-Sc0000273-1570713199:146568..146717 | Branchiostoma lanceolatum | exon |
| Blg00576.9-exon-Sc0000273-1570713199:145842..145954 | Blg00576.9-exon-Sc0000273-1570713199:145842..145954 | Branchiostoma lanceolatum | exon |
| Blg00576.9-exon-Sc0000273-1570713199:145075..145297 | Blg00576.9-exon-Sc0000273-1570713199:145075..145297 | Branchiostoma lanceolatum | exon |
| Blg00576.9-exon-Sc0000273-1570713199:144680..144844 | Blg00576.9-exon-Sc0000273-1570713199:144680..144844 | Branchiostoma lanceolatum | exon |
| Blg00576.9-exon-Sc0000273-1570713199:142462..144553 | Blg00576.9-exon-Sc0000273-1570713199:142462..144553 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000273 | genome | Sc0000273:142462..150050 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00576 |
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